RNA–Protein interactions for RNA: ENST00000489475.5

HOXB3-210, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-210ENST00000489475 XAGE1AQ9HD64 81 aa17.46■□□□□ 0.39
HOXB3-210ENST00000489475 FABP2P12104 132 aa17.44■□□□□ 0.38
HOXB3-210ENST00000489475 DNAH10Q8IVF4 4471 aa17.44■□□□□ 0.38
HOXB3-210ENST00000489475 GAGE2EQ4V326 116 aa17.44■□□□□ 0.38
HOXB3-210ENST00000489475 Q6ZRP5 223 aa17.44■□□□□ 0.38
HOXB3-210ENST00000489475 GAGE2DQ9UEU5 116 aa17.44■□□□□ 0.38
HOXB3-210ENST00000489475 TLX1NBP0CAT3 122 aa17.43■□□□□ 0.38
HOXB3-210ENST00000489475 CNBPP62633 177 aaKnown RBP17.43■□□□□ 0.38
HOXB3-210ENST00000489475 C1orf134Q5TEV5 83 aa17.42■□□□□ 0.38
HOXB3-210ENST00000489475 LINC00337Q8N6G1 96 aa17.42■□□□□ 0.38
HOXB3-210ENST00000489475 RPL18AQ02543 176 aaKnown RBP17.41■□□□□ 0.38
HOXB3-210ENST00000489475 PSMB2P49721 201 aa17.4■□□□□ 0.38
HOXB3-210ENST00000489475 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.4■□□□□ 0.38
HOXB3-210ENST00000489475 PRR3P79522 188 aaKnown RBP17.39■□□□□ 0.37
HOXB3-210ENST00000489475 Q8NDZ9 215 aa17.37■□□□□ 0.37
HOXB3-210ENST00000489475 OR13C6PQ8NH95 151 aa17.37■□□□□ 0.37
HOXB3-210ENST00000489475 LOC107984640A0A0U1RRK4 108 aa17.36■□□□□ 0.37
HOXB3-210ENST00000489475 LYRM7Q5U5X0 104 aa17.36■□□□□ 0.37
HOXB3-210ENST00000489475 SPCS1Q9Y6A9 102 aa17.36■□□□□ 0.37
HOXB3-210ENST00000489475 KMT2AQ03164 3969 aa17.35■□□□□ 0.37
HOXB3-210ENST00000489475 NCR3O14931 201 aa17.35■□□□□ 0.37
HOXB3-210ENST00000489475 A0A087WTM6 91 aa17.34■□□□□ 0.37
HOXB3-210ENST00000489475 GAGE10A6NGK3 116 aa17.34■□□□□ 0.37
HOXB3-210ENST00000489475 SCGB1C2P0DMR2 95 aa17.34■□□□□ 0.37
HOXB3-210ENST00000489475 Q8N814 137 aa17.34■□□□□ 0.37
HOXB3-210ENST00000489475 ALMS1Q8TCU4 4167 aa17.33■□□□□ 0.37
HOXB3-210ENST00000489475 TRIAP1O43715 76 aa17.33■□□□□ 0.36
HOXB3-210ENST00000489475 C9orf129Q5T035 196 aaKnown RBP17.33■□□□□ 0.36
HOXB3-210ENST00000489475 GTF2H5Q6ZYL4 71 aa17.33■□□□□ 0.36
HOXB3-210ENST00000489475 K7EP34 96 aa17.31■□□□□ 0.36
HOXB3-210ENST00000489475 GAGE2BQ13066 116 aa17.31■□□□□ 0.36
HOXB3-210ENST00000489475 TRBV10-2A0A0K0K1G8 114 aa17.31■□□□□ 0.36
HOXB3-210ENST00000489475 COX6CP09669 75 aa17.3■□□□□ 0.36
HOXB3-210ENST00000489475 UBE2V1Q13404 147 aa17.3■□□□□ 0.36
HOXB3-210ENST00000489475 TMEM126AQ9H061 195 aa17.3■□□□□ 0.36
HOXB3-210ENST00000489475 VPREB1P12018 145 aa17.29■□□□□ 0.36
HOXB3-210ENST00000489475 S100A7L2Q5SY68 101 aa17.29■□□□□ 0.36
HOXB3-210ENST00000489475 RPL28P46779 137 aaKnown RBP17.26■□□□□ 0.35
HOXB3-210ENST00000489475 C9orf163Q8N9P6 203 aa17.26■□□□□ 0.35
HOXB3-210ENST00000489475 SMIM11BQ8TCY0 68 aa17.26■□□□□ 0.35
HOXB3-210ENST00000489475 DNAH6Q9C0G6 4158 aa17.26■□□□□ 0.35
HOXB3-210ENST00000489475 PKIGQ9Y2B9 76 aa17.25■□□□□ 0.35
HOXB3-210ENST00000489475 TRBV20-1A0A075B6N2 111 aa17.24■□□□□ 0.35
HOXB3-210ENST00000489475 PLA2G2DQ9UNK4 145 aa17.24■□□□□ 0.35
HOXB3-210ENST00000489475 C16orf90A8MZG2 172 aa17.23■□□□□ 0.35
HOXB3-210ENST00000489475 M0R378 163 aa17.23■□□□□ 0.35
HOXB3-210ENST00000489475 NKAPP1Q8N9T2 125 aa17.21■□□□□ 0.35
HOXB3-210ENST00000489475 A0A096LNI7 61 aa17.21■□□□□ 0.35
HOXB3-210ENST00000489475 TCL1BO95988 128 aa17.21■□□□□ 0.35
HOXB3-210ENST00000489475 IGLV6-57P01721 117 aa17.21■□□□□ 0.35
HOXB3-210ENST00000489475 SERTAD4-AS1Q5TG53 156 aa17.21■□□□□ 0.35
HOXB3-210ENST00000489475 H3BMG7 143 aa17.19■□□□□ 0.34
HOXB3-210ENST00000489475 DNAH2Q9P225 4427 aa17.19■□□□□ 0.34
HOXB3-210ENST00000489475 IGKV2-24A0A0C4DH68 120 aa17.18■□□□□ 0.34
HOXB3-210ENST00000489475 TRBV10-3A0A0K0K1G6 114 aa17.18■□□□□ 0.34
HOXB3-210ENST00000489475 PCP4P48539 62 aa17.18■□□□□ 0.34
HOXB3-210ENST00000489475 FAM168BA1KXE4 195 aa17.17■□□□□ 0.34
HOXB3-210ENST00000489475 TNP2Q05952 138 aa17.17■□□□□ 0.34
HOXB3-210ENST00000489475 LINC01620Q4KN68 170 aa17.17■□□□□ 0.34
HOXB3-210ENST00000489475 RTL8CO15255 209 aa17.16■□□□□ 0.34
HOXB3-210ENST00000489475 LCE6AA0A183 80 aa17.15■□□□□ 0.34
HOXB3-210ENST00000489475 ATXN8Q156A1 80 aa17.15■□□□□ 0.34
HOXB3-210ENST00000489475 SDIM1Q6ZPB5 146 aa17.15■□□□□ 0.34
HOXB3-210ENST00000489475 CLEC2BQ92478 149 aa17.15■□□□□ 0.34
HOXB3-210ENST00000489475 IGLV5-37A0A075B6J1 123 aa17.14■□□□□ 0.34
HOXB3-210ENST00000489475 FAM19A5Q7Z5A7 132 aaPredicted RBP17.13■□□□□ 0.33
HOXB3-210ENST00000489475 TRAV23DV6A0A075B6W5 121 aa17.11■□□□□ 0.33
HOXB3-210ENST00000489475 H0YGX0 51 aa17.11■□□□□ 0.33
HOXB3-210ENST00000489475 LINC00474Q9P2X8 69 aa17.11■□□□□ 0.33
HOXB3-210ENST00000489475 KRTAP7-1Q8IUC3 87 aa17.1■□□□□ 0.33
HOXB3-210ENST00000489475 C7orf33Q8WU49 177 aa17.1■□□□□ 0.33
HOXB3-210ENST00000489475 C6orf99Q4VX62 202 aa17.1■□□□□ 0.33
HOXB3-210ENST00000489475 C22orf24Q9Y442 160 aa17.1■□□□□ 0.33
HOXB3-210ENST00000489475 IGLV5-52A0A0A0MRZ9 124 aa17.09■□□□□ 0.33
HOXB3-210ENST00000489475 LST1O00453 97 aa17.09■□□□□ 0.33
HOXB3-210ENST00000489475 CHTF8P0CG12 524 aa17.09■□□□□ 0.33
HOXB3-210ENST00000489475 FUSP35637 526 aaKnown RBP eCLIP17.08■□□□□ 0.33
HOXB3-210ENST00000489475 MRPL55Q7Z7F7 128 aaKnown RBP17.06■□□□□ 0.32
HOXB3-210ENST00000489475 A0A1W2PNN7 141 aa17.05■□□□□ 0.32
HOXB3-210ENST00000489475 DNAH17Q9UFH2 4485 aa17.04■□□□□ 0.32
HOXB3-210ENST00000489475 ZNF73O43830 326 aaPredicted RBP17.04■□□□□ 0.32
HOXB3-210ENST00000489475 DIRC1Q969H9 104 aa17.04■□□□□ 0.32
HOXB3-210ENST00000489475 FAM218AQ96MZ4 157 aa17.04■□□□□ 0.32
HOXB3-210ENST00000489475 LINC00167Q96N53 147 aa17.03■□□□□ 0.32
HOXB3-210ENST00000489475 F8W1H4 67 aa17.03■□□□□ 0.32
HOXB3-210ENST00000489475 M0QXV9 152 aa17.03■□□□□ 0.32
HOXB3-210ENST00000489475 MTURNQ8N3F0 131 aa17.03■□□□□ 0.32
HOXB3-210ENST00000489475 HYDINQ4G0P3 5121 aa17.02■□□□□ 0.31
HOXB3-210ENST00000489475 RPL37AP8A6NKH3 93 aa17.01■□□□□ 0.31
HOXB3-210ENST00000489475 C9JAW5 83 aa17.01■□□□□ 0.31
HOXB3-210ENST00000489475 KCNQ1DNQ9H478 68 aa17.01■□□□□ 0.31
HOXB3-210ENST00000489475 DPH3Q96FX2 82 aa17■□□□□ 0.31
HOXB3-210ENST00000489475 IGLV1-50A0A075B6I6 118 aa17■□□□□ 0.31
HOXB3-210ENST00000489475 TRACP01848 142 aa17■□□□□ 0.31
HOXB3-210ENST00000489475 PRO0461Q9UI25 63 aa17■□□□□ 0.31
HOXB3-210ENST00000489475 A0A087WYN8 130 aa16.98■□□□□ 0.31
HOXB3-210ENST00000489475 SPACA4Q8TDM5 124 aa16.98■□□□□ 0.31
HOXB3-210ENST00000489475 PANO1I0J062 215 aa16.97■□□□□ 0.31
HOXB3-210ENST00000489475 FRAS1Q86XX4 4008 aa16.96■□□□□ 0.31
HOXB3-210ENST00000489475 TRBV7-6A0A0J9YX20 115 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms