RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 LINC00158P58513 81 aa14.86□□□□□ -0.03
HMGN1-217ENST00000489072 RPL24P83731 157 aaKnown RBP14.86□□□□□ -0.03
HMGN1-217ENST00000489072 A0A0U1RRA0 63 aa14.85□□□□□ -0.03
HMGN1-217ENST00000489072 LEPROTL1O95214 131 aa14.85□□□□□ -0.03
HMGN1-217ENST00000489072 UBE2AP49459 152 aa14.83□□□□□ -0.04
HMGN1-217ENST00000489072 TMEM238C9JI98 176 aa14.82□□□□□ -0.04
HMGN1-217ENST00000489072 A0A087X002 238 aa14.81□□□□□ -0.04
HMGN1-217ENST00000489072 SMIM13P0DJ93 91 aa14.81□□□□□ -0.04
HMGN1-217ENST00000489072 TMEM126AQ9H061 195 aa14.8□□□□□ -0.04
HMGN1-217ENST00000489072 FABP4P15090 132 aa14.79□□□□□ -0.04
HMGN1-217ENST00000489072 M0R378 163 aa14.78□□□□□ -0.04
HMGN1-217ENST00000489072 TSPEAR-AS2P59090 65 aa14.78□□□□□ -0.04
HMGN1-217ENST00000489072 PRLHP81277 87 aa14.78□□□□□ -0.04
HMGN1-217ENST00000489072 ANAPC11Q9NYG5 84 aa14.78□□□□□ -0.04
HMGN1-217ENST00000489072 NDUFA12Q9UI09 145 aa14.78□□□□□ -0.04
HMGN1-217ENST00000489072 HERV-K104P63124 156 aa14.77□□□□□ -0.05
HMGN1-217ENST00000489072 MEIG1Q5JSS6 88 aa14.77□□□□□ -0.05
HMGN1-217ENST00000489072 HSPB8Q9UJY1 196 aa14.77□□□□□ -0.05
HMGN1-217ENST00000489072 LPAP08519 4548 aa14.76□□□□□ -0.05
HMGN1-217ENST00000489072 FAM19A1Q7Z5A9 133 aa14.76□□□□□ -0.05
HMGN1-217ENST00000489072 MIR7-3HGQ8N6C7 128 aa14.75□□□□□ -0.05
HMGN1-217ENST00000489072 PMCHL2Q9BQD1 86 aa14.75□□□□□ -0.05
HMGN1-217ENST00000489072 RNF213Q63HN8 5207 aa14.75□□□□□ -0.05
HMGN1-217ENST00000489072 CRYGAP11844 174 aa14.74□□□□□ -0.05
HMGN1-217ENST00000489072 PLNP26678 52 aa14.74□□□□□ -0.05
HMGN1-217ENST00000489072 MYMXA0A1B0GTQ4 84 aa14.73□□□□□ -0.05
HMGN1-217ENST00000489072 LEPROTO15243 131 aa14.73□□□□□ -0.05
HMGN1-217ENST00000489072 ATP6V1G1O75348 118 aa14.73□□□□□ -0.05
HMGN1-217ENST00000489072 DPM2O94777 84 aa14.72□□□□□ -0.05
HMGN1-217ENST00000489072 BOD1L2Q8IYS8 172 aa14.72□□□□□ -0.05
HMGN1-217ENST00000489072 KRTAP13-2Q52LG2 175 aa14.7□□□□□ -0.06
HMGN1-217ENST00000489072 TYMSOSQ8TAI1 123 aa14.7□□□□□ -0.06
HMGN1-217ENST00000489072 PLEKHB2Q96CS7 222 aa14.7□□□□□ -0.06
HMGN1-217ENST00000489072 LINC00587B1AMM8 73 aa14.68□□□□□ -0.06
HMGN1-217ENST00000489072 NCR3O14931 201 aa14.68□□□□□ -0.06
HMGN1-217ENST00000489072 IGKCP01834 107 aa14.68□□□□□ -0.06
HMGN1-217ENST00000489072 J3QQQ9 107 aa14.67□□□□□ -0.06
HMGN1-217ENST00000489072 HIST1H2BKO60814 126 aa14.67□□□□□ -0.06
HMGN1-217ENST00000489072 HIST1H2BJP06899 126 aa14.67□□□□□ -0.06
HMGN1-217ENST00000489072 HIST1H2BOP23527 126 aa14.67□□□□□ -0.06
HMGN1-217ENST00000489072 HIST1H2BBP33778 126 aa14.67□□□□□ -0.06
HMGN1-217ENST00000489072 HIST1H2BDP58876 126 aa14.67□□□□□ -0.06
HMGN1-217ENST00000489072 HIST1H2BCP62807 126 aa14.67□□□□□ -0.06
HMGN1-217ENST00000489072 HIST2H2BEQ16778 126 aa14.67□□□□□ -0.06
HMGN1-217ENST00000489072 FAM229BQ4G0N7 80 aa14.67□□□□□ -0.06
HMGN1-217ENST00000489072 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.67□□□□□ -0.06
HMGN1-217ENST00000489072 HIST1H2BHQ93079 126 aa14.67□□□□□ -0.06
HMGN1-217ENST00000489072 HIST1H2BNQ99877 126 aa14.67□□□□□ -0.06
HMGN1-217ENST00000489072 HIST1H2BMQ99879 126 aa14.67□□□□□ -0.06
HMGN1-217ENST00000489072 MAP1LC3CQ9BXW4 147 aa14.66□□□□□ -0.06
HMGN1-217ENST00000489072 TSPAN13O95857 204 aa14.65□□□□□ -0.06
HMGN1-217ENST00000489072 HERVK_113P61574 105 aa14.65□□□□□ -0.06
HMGN1-217ENST00000489072 LCE2DQ5TA82 110 aaPredicted RBP14.65□□□□□ -0.06
HMGN1-217ENST00000489072 DAND5Q8N907 189 aa14.65□□□□□ -0.06
HMGN1-217ENST00000489072 IGKV2D-26A0A0A0MRZ7 120 aa14.62□□□□□ -0.07
HMGN1-217ENST00000489072 PRYO14603 147 aa14.62□□□□□ -0.07
HMGN1-217ENST00000489072 HIGD2AQ9BW72 106 aa14.62□□□□□ -0.07
HMGN1-217ENST00000489072 LOC107984156A0A0G2JMH3 177 aa14.61□□□□□ -0.07
HMGN1-217ENST00000489072 LGALS3P17931 250 aaKnown RBP14.61□□□□□ -0.07
HMGN1-217ENST00000489072 NMUP48645 174 aa14.61□□□□□ -0.07
HMGN1-217ENST00000489072 PRR4Q16378 134 aa14.61□□□□□ -0.07
HMGN1-217ENST00000489072 ARL17AQ8IVW1 177 aa14.61□□□□□ -0.07
HMGN1-217ENST00000489072 KCNQ1DNQ9H478 68 aa14.6□□□□□ -0.07
HMGN1-217ENST00000489072 TRBV10-3A0A0K0K1G6 114 aa14.59□□□□□ -0.07
HMGN1-217ENST00000489072 SPRR1AP35321 89 aa14.59□□□□□ -0.07
HMGN1-217ENST00000489072 SYS1-DBNDD2H3BUS1 97 aa14.58□□□□□ -0.08
HMGN1-217ENST00000489072 KRTAP4-16G5E9R7 235 aaPredicted RBP14.57□□□□□ -0.08
HMGN1-217ENST00000489072 LINC00337Q8N6G1 96 aa14.56□□□□□ -0.08
HMGN1-217ENST00000489072 E9PLD3 99 aa14.55□□□□□ -0.08
HMGN1-217ENST00000489072 SPRR4Q96PI1 79 aa14.55□□□□□ -0.08
HMGN1-217ENST00000489072 C3orf22Q8N5N4 141 aa14.53□□□□□ -0.08
HMGN1-217ENST00000489072 LINC00304Q8N9R0 145 aa14.53□□□□□ -0.08
HMGN1-217ENST00000489072 A0A0J9YXY3 114 aa14.52□□□□□ -0.09
HMGN1-217ENST00000489072 TRBV10-2A0A0K0K1G8 114 aa14.52□□□□□ -0.09
HMGN1-217ENST00000489072 LINC01545Q5VT33 79 aa14.52□□□□□ -0.09
HMGN1-217ENST00000489072 ETDCA0A1B0GVM5 59 aa14.51□□□□□ -0.09
HMGN1-217ENST00000489072 EIF4EBP3O60516 100 aaPredicted RBP14.51□□□□□ -0.09
HMGN1-217ENST00000489072 ADAMTSL4-AS1Q5T5F5 129 aa14.51□□□□□ -0.09
HMGN1-217ENST00000489072 SOSTDC1Q6X4U4 206 aa14.51□□□□□ -0.09
HMGN1-217ENST00000489072 DDTP30046 118 aa14.5□□□□□ -0.09
HMGN1-217ENST00000489072 MIEN1Q9BRT3 115 aa14.5□□□□□ -0.09
HMGN1-217ENST00000489072 SMCR5Q8TEV8 140 aa14.49□□□□□ -0.09
HMGN1-217ENST00000489072 SPANXB1Q9NS25 103 aaPredicted RBP14.49□□□□□ -0.09
HMGN1-217ENST00000489072 NPC2P61916 151 aa14.48□□□□□ -0.09
HMGN1-217ENST00000489072 PET117Q6UWS5 81 aa14.48□□□□□ -0.09
HMGN1-217ENST00000489072 NDUFC2O95298 119 aa14.47□□□□□ -0.09
HMGN1-217ENST00000489072 ZNF706Q9Y5V0 76 aaPredicted RBP14.47□□□□□ -0.09
HMGN1-217ENST00000489072 B5MCH6 92 aa14.46□□□□□ -0.09
HMGN1-217ENST00000489072 COA6Q5JTJ3 125 aaKnown RBP14.46□□□□□ -0.09
HMGN1-217ENST00000489072 C3orf79P0CE67 100 aa14.45□□□□□ -0.1
HMGN1-217ENST00000489072 S100A12P80511 92 aa14.45□□□□□ -0.1
HMGN1-217ENST00000489072 IGLV6-57P01721 117 aa14.44□□□□□ -0.1
HMGN1-217ENST00000489072 LITAFQ99732 161 aa14.44□□□□□ -0.1
HMGN1-217ENST00000489072 RETNLBQ9BQ08 111 aa14.44□□□□□ -0.1
HMGN1-217ENST00000489072 PPDPFQ9H3Y8 114 aa14.42□□□□□ -0.1
HMGN1-217ENST00000489072 ERC2-IT1O76042 136 aa14.41□□□□□ -0.1
HMGN1-217ENST00000489072 S100A7L2Q5SY68 101 aa14.41□□□□□ -0.1
HMGN1-217ENST00000489072 Q9BRP9 147 aa14.4□□□□□ -0.1
HMGN1-217ENST00000489072 TTTY13Q9BZ97 58 aa14.4□□□□□ -0.1
HMGN1-217ENST00000489072 KRTDAPP60985 99 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms