RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 TRBV10-3A0A0K0K1G6 114 aa13.35□□□□□ -0.27
HMG20B-213ENST00000488973 FLNAP21333 2647 aaKnown RBP13.35□□□□□ -0.27
HMG20B-213ENST00000488973 ATP5EP56381 51 aaPredicted RBP13.35□□□□□ -0.27
HMG20B-213ENST00000488973 TRAV7A0A075B6U4 112 aa13.34□□□□□ -0.27
HMG20B-213ENST00000488973 HILS1P60008 231 aa13.34□□□□□ -0.27
HMG20B-213ENST00000488973 LINC00269Q8N2A0 174 aa13.34□□□□□ -0.27
HMG20B-213ENST00000488973 TRAV23DV6A0A075B6W5 121 aa13.34□□□□□ -0.27
HMG20B-213ENST00000488973 FAM19A1Q7Z5A9 133 aa13.34□□□□□ -0.27
HMG20B-213ENST00000488973 CHCHD10Q8WYQ3 142 aaPredicted RBP13.33□□□□□ -0.27
HMG20B-213ENST00000488973 TRBV7-6A0A0J9YX20 115 aa13.33□□□□□ -0.28
HMG20B-213ENST00000488973 C6orf99Q4VX62 202 aa13.33□□□□□ -0.28
HMG20B-213ENST00000488973 UBL5Q9BZL1 73 aa13.32□□□□□ -0.28
HMG20B-213ENST00000488973 SETD2Q9BYW2 2564 aaPredicted RBP13.32□□□□□ -0.28
HMG20B-213ENST00000488973 A0A096LPF7 62 aa13.32□□□□□ -0.28
HMG20B-213ENST00000488973 LINC00575Q6W349 94 aa13.31□□□□□ -0.28
HMG20B-213ENST00000488973 X6R8D5 127 aa13.31□□□□□ -0.28
HMG20B-213ENST00000488973 PMAIP1Q13794 54 aa13.31□□□□□ -0.28
HMG20B-213ENST00000488973 LINC00474Q9P2X8 69 aa13.31□□□□□ -0.28
HMG20B-213ENST00000488973 ITPR2Q14571 2701 aa13.3□□□□□ -0.28
HMG20B-213ENST00000488973 NDUFC1O43677 76 aa13.3□□□□□ -0.28
HMG20B-213ENST00000488973 C9orf116Q5BN46 136 aaPredicted RBP13.3□□□□□ -0.28
HMG20B-213ENST00000488973 ENHOQ6UWT2 76 aa13.29□□□□□ -0.28
HMG20B-213ENST00000488973 Q8NDZ9 215 aa13.29□□□□□ -0.28
HMG20B-213ENST00000488973 REG3AQ06141 175 aa13.29□□□□□ -0.28
HMG20B-213ENST00000488973 WFDC9Q8NEX5 89 aa13.29□□□□□ -0.28
HMG20B-213ENST00000488973 MUC7Q8TAX7 377 aa13.29□□□□□ -0.28
HMG20B-213ENST00000488973 RBM3P98179 157 aaKnown RBP13.28□□□□□ -0.28
HMG20B-213ENST00000488973 IGLV10-54A0A075B6I4 117 aa13.27□□□□□ -0.29
HMG20B-213ENST00000488973 ZNF561-AS1K7EIQ3 104 aa13.27□□□□□ -0.29
HMG20B-213ENST00000488973 ANGP03950 147 aaKnown RBP13.27□□□□□ -0.29
HMG20B-213ENST00000488973 LOC110117498A0A087WWA1 95 aa13.27□□□□□ -0.29
HMG20B-213ENST00000488973 Q6ZQT0 140 aa13.27□□□□□ -0.29
HMG20B-213ENST00000488973 FN1P02751 2386 aaKnown RBP13.26□□□□□ -0.29
HMG20B-213ENST00000488973 LYRM9A8MSI8 78 aa13.26□□□□□ -0.29
HMG20B-213ENST00000488973 ANK3Q12955 4377 aaKnown RBP13.25□□□□□ -0.29
HMG20B-213ENST00000488973 SMR3AQ99954 134 aa13.25□□□□□ -0.29
HMG20B-213ENST00000488973 F8WEM9 126 aa13.24□□□□□ -0.29
HMG20B-213ENST00000488973 C6orf223Q8N319 242 aa13.24□□□□□ -0.29
HMG20B-213ENST00000488973 GCN1Q92616 2671 aaKnown RBP13.24□□□□□ -0.29
HMG20B-213ENST00000488973 LAMTOR3Q9UHA4 124 aa13.24□□□□□ -0.29
HMG20B-213ENST00000488973 PRR15Q8IV56 129 aa13.23□□□□□ -0.29
HMG20B-213ENST00000488973 Q8N3U1 123 aa13.23□□□□□ -0.29
HMG20B-213ENST00000488973 ACANP16112 2415 aa13.22□□□□□ -0.29
HMG20B-213ENST00000488973 FASNP49327 2511 aaKnown RBP13.21□□□□□ -0.29
HMG20B-213ENST00000488973 IGLV6-57P01721 117 aa13.21□□□□□ -0.29
HMG20B-213ENST00000488973 Q6ZRU5 148 aa13.21□□□□□ -0.29
HMG20B-213ENST00000488973 A0A0J9YWU9 116 aa13.21□□□□□ -0.3
HMG20B-213ENST00000488973 H3BQ85 93 aa13.21□□□□□ -0.3
HMG20B-213ENST00000488973 IGHV4-30-4P0DP06 118 aa13.21□□□□□ -0.3
HMG20B-213ENST00000488973 SPAG11BQ08648 103 aa13.2□□□□□ -0.3
HMG20B-213ENST00000488973 C10orf25Q5T742 122 aa13.2□□□□□ -0.3
HMG20B-213ENST00000488973 UNQ6190/PRO20217Q6UXQ8 127 aa13.2□□□□□ -0.3
HMG20B-213ENST00000488973 RMI2Q96E14 147 aa13.19□□□□□ -0.3
HMG20B-213ENST00000488973 CD164Q04900 197 aa13.19□□□□□ -0.3
HMG20B-213ENST00000488973 PDE6GP18545 87 aa13.18□□□□□ -0.3
HMG20B-213ENST00000488973 CYSRT1A8MQ03 144 aa13.16□□□□□ -0.3
HMG20B-213ENST00000488973 LINC01547P58512 204 aaPredicted RBP13.16□□□□□ -0.3
HMG20B-213ENST00000488973 C9orf66Q5T8R8 295 aa13.16□□□□□ -0.3
HMG20B-213ENST00000488973 SNURFQ9Y675 71 aa13.16□□□□□ -0.3
HMG20B-213ENST00000488973 HECTD1Q9ULT8 2610 aa13.16□□□□□ -0.3
HMG20B-213ENST00000488973 Q6ZQY7 126 aa13.15□□□□□ -0.3
HMG20B-213ENST00000488973 M0R2N4 97 aa13.14□□□□□ -0.31
HMG20B-213ENST00000488973 Q6ZVQ6 151 aa13.14□□□□□ -0.31
HMG20B-213ENST00000488973 GVQW2A0A096LPI5 108 aaPredicted RBP13.14□□□□□ -0.31
HMG20B-213ENST00000488973 DAD1P61803 113 aa13.14□□□□□ -0.31
HMG20B-213ENST00000488973 NBEAL2Q6ZNJ1 2754 aa13.13□□□□□ -0.31
HMG20B-213ENST00000488973 HIVEP2P31629 2446 aa13.13□□□□□ -0.31
HMG20B-213ENST00000488973 DEFB4AO15263 64 aa13.12□□□□□ -0.31
HMG20B-213ENST00000488973 KRTAP10-3P60369 221 aa13.12□□□□□ -0.31
HMG20B-213ENST00000488973 CXCL6P80162 114 aa13.12□□□□□ -0.31
HMG20B-213ENST00000488973 LELP1Q5T871 98 aa13.12□□□□□ -0.31
HMG20B-213ENST00000488973 PRR34Q9NV39 138 aa13.12□□□□□ -0.31
HMG20B-213ENST00000488973 HAMPP81172 84 aa13.11□□□□□ -0.31
HMG20B-213ENST00000488973 DEFB135Q30KP9 77 aa13.11□□□□□ -0.31
HMG20B-213ENST00000488973 MTORP42345 2549 aa13.1□□□□□ -0.31
HMG20B-213ENST00000488973 MPLKIPQ8TAP9 179 aa13.1□□□□□ -0.31
HMG20B-213ENST00000488973 DIRC1Q969H9 104 aa13.1□□□□□ -0.31
HMG20B-213ENST00000488973 RETNQ9HD89 108 aa13.1□□□□□ -0.31
HMG20B-213ENST00000488973 INAFM1C9JVW0 142 aa13.09□□□□□ -0.31
HMG20B-213ENST00000488973 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.09□□□□□ -0.31
HMG20B-213ENST00000488973 OTOGQ6ZRI0 2925 aa13.08□□□□□ -0.32
HMG20B-213ENST00000488973 FAM229BQ4G0N7 80 aa13.08□□□□□ -0.32
HMG20B-213ENST00000488973 SPATA3Q8NHX4 192 aa13.08□□□□□ -0.32
HMG20B-213ENST00000488973 APOC4P55056 127 aa13.07□□□□□ -0.32
HMG20B-213ENST00000488973 KLK12Q9UKR0 248 aa13.07□□□□□ -0.32
HMG20B-213ENST00000488973 TRBV7-4A0A0J9YYF1 115 aa13.07□□□□□ -0.32
HMG20B-213ENST00000488973 MIFP14174 115 aa13.07□□□□□ -0.32
HMG20B-213ENST00000488973 C6orf48Q9UBA6 75 aa13.07□□□□□ -0.32
HMG20B-213ENST00000488973 CELA1Q9UNI1 258 aa13.06□□□□□ -0.32
HMG20B-213ENST00000488973 ESRGQ1W209 222 aa13.05□□□□□ -0.32
HMG20B-213ENST00000488973 ZNF73O43830 326 aaPredicted RBP13.05□□□□□ -0.32
HMG20B-213ENST00000488973 COX7BP24311 80 aa13.04□□□□□ -0.32
HMG20B-213ENST00000488973 TRAV10A0A0B4J240 114 aa13.04□□□□□ -0.32
HMG20B-213ENST00000488973 Q8NAQ8 132 aa13.04□□□□□ -0.32
HMG20B-213ENST00000488973 NOTCH2Q04721 2471 aa13.04□□□□□ -0.32
HMG20B-213ENST00000488973 ELOF1P60002 83 aaKnown RBP13.03□□□□□ -0.32
HMG20B-213ENST00000488973 XAGE1AQ9HD64 81 aa13.03□□□□□ -0.32
HMG20B-213ENST00000488973 SPART-AS1P0CW21 52 aa13.01□□□□□ -0.33
HMG20B-213ENST00000488973 ERC2-IT1O76042 136 aa13.01□□□□□ -0.33
HMG20B-213ENST00000488973 HTN3P15516 51 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms