RNA–Protein interactions for RNA: ENST00000488918.2

ARHGEF39-204, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 347 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-204ENST00000488918 ZNF861PO60384 105 aa6.85□□□□□ -1.31
ARHGEF39-204ENST00000488918 BCE1O60756 84 aa6.85□□□□□ -1.31
ARHGEF39-204ENST00000488918 IGKCP01834 107 aa6.85□□□□□ -1.31
ARHGEF39-204ENST00000488918 KRTAP7-1Q8IUC3 87 aa6.85□□□□□ -1.31
ARHGEF39-204ENST00000488918 IGKV2-28A0A075B6P5 120 aa6.84□□□□□ -1.31
ARHGEF39-204ENST00000488918 IGKV2D-28P01615 120 aa6.84□□□□□ -1.31
ARHGEF39-204ENST00000488918 MIEN1Q9BRT3 115 aa6.84□□□□□ -1.31
ARHGEF39-204ENST00000488918 MYCBP2O75592 4640 aa6.83□□□□□ -1.32
ARHGEF39-204ENST00000488918 IGLV5-37A0A075B6J1 123 aa6.83□□□□□ -1.32
ARHGEF39-204ENST00000488918 LEPROTO15243 131 aa6.83□□□□□ -1.32
ARHGEF39-204ENST00000488918 HIST1H2BKO60814 126 aa6.82□□□□□ -1.32
ARHGEF39-204ENST00000488918 HIST1H2BJP06899 126 aa6.82□□□□□ -1.32
ARHGEF39-204ENST00000488918 SMIM13P0DJ93 91 aa6.82□□□□□ -1.32
ARHGEF39-204ENST00000488918 MT1HL1P0DM35 61 aa6.82□□□□□ -1.32
ARHGEF39-204ENST00000488918 HIST1H2BOP23527 126 aa6.82□□□□□ -1.32
ARHGEF39-204ENST00000488918 HIST1H2BBP33778 126 aa6.82□□□□□ -1.32
ARHGEF39-204ENST00000488918 RPL13AP40429 203 aaKnown RBP6.82□□□□□ -1.32
ARHGEF39-204ENST00000488918 NMUP48645 174 aa6.82□□□□□ -1.32
ARHGEF39-204ENST00000488918 HIST1H2BDP58876 126 aa6.82□□□□□ -1.32
ARHGEF39-204ENST00000488918 HIST1H2BCP62807 126 aa6.82□□□□□ -1.32
ARHGEF39-204ENST00000488918 HIST2H2BEQ16778 126 aa6.82□□□□□ -1.32
ARHGEF39-204ENST00000488918 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.82□□□□□ -1.32
ARHGEF39-204ENST00000488918 KRTAP11-1Q8IUC1 163 aa6.82□□□□□ -1.32
ARHGEF39-204ENST00000488918 BOD1L2Q8IYS8 172 aa6.82□□□□□ -1.32
ARHGEF39-204ENST00000488918 HIST1H2BHQ93079 126 aa6.82□□□□□ -1.32
ARHGEF39-204ENST00000488918 HIST1H2BNQ99877 126 aa6.82□□□□□ -1.32
ARHGEF39-204ENST00000488918 HIST1H2BMQ99879 126 aa6.82□□□□□ -1.32
ARHGEF39-204ENST00000488918 PMCHL2Q9BQD1 86 aa6.82□□□□□ -1.32
ARHGEF39-204ENST00000488918 IGLV1-50A0A075B6I6 118 aa6.81□□□□□ -1.32
ARHGEF39-204ENST00000488918 J3QQQ9 107 aa6.81□□□□□ -1.32
ARHGEF39-204ENST00000488918 FAM19A1Q7Z5A9 133 aa6.81□□□□□ -1.32
ARHGEF39-204ENST00000488918 MIR7-3HGQ8N6C7 128 aa6.81□□□□□ -1.32
ARHGEF39-204ENST00000488918 C20orf202A1L168 122 aa6.8□□□□□ -1.32
ARHGEF39-204ENST00000488918 M0R378 163 aa6.8□□□□□ -1.32
ARHGEF39-204ENST00000488918 LINC00310P59036 64 aa6.8□□□□□ -1.32
ARHGEF39-204ENST00000488918 SYS1-DBNDD2H3BUS1 97 aa6.79□□□□□ -1.32
ARHGEF39-204ENST00000488918 VPREB1P12018 145 aa6.79□□□□□ -1.32
ARHGEF39-204ENST00000488918 PRR26Q8N8Z3 221 aa6.79□□□□□ -1.32
ARHGEF39-204ENST00000488918 KRTDAPP60985 99 aa6.78□□□□□ -1.32
ARHGEF39-204ENST00000488918 PET117Q6UWS5 81 aa6.78□□□□□ -1.32
ARHGEF39-204ENST00000488918 IGKV2D-26A0A0A0MRZ7 120 aa6.77□□□□□ -1.33
ARHGEF39-204ENST00000488918 C5orf52A6NGY3 159 aa6.77□□□□□ -1.33
ARHGEF39-204ENST00000488918 NCR3O14931 201 aa6.77□□□□□ -1.33
ARHGEF39-204ENST00000488918 KRTAP10-8P60410 259 aa6.77□□□□□ -1.33
ARHGEF39-204ENST00000488918 TMEM126AQ9H061 195 aa6.77□□□□□ -1.33
ARHGEF39-204ENST00000488918 LOC105371267A0A1B0GV96 52 aa6.76□□□□□ -1.33
ARHGEF39-204ENST00000488918 CRYGAP11844 174 aa6.76□□□□□ -1.33
ARHGEF39-204ENST00000488918 S100A2P29034 98 aa6.76□□□□□ -1.33
ARHGEF39-204ENST00000488918 AKR1D1P51857 326 aa6.76□□□□□ -1.33
ARHGEF39-204ENST00000488918 S100A7L2Q5SY68 101 aa6.76□□□□□ -1.33
ARHGEF39-204ENST00000488918 ETDCA0A1B0GVM5 59 aa6.75□□□□□ -1.33
ARHGEF39-204ENST00000488918 TMEM238C9JI98 176 aa6.75□□□□□ -1.33
ARHGEF39-204ENST00000488918 SNRPEP62304 92 aaKnown RBP6.75□□□□□ -1.33
ARHGEF39-204ENST00000488918 PRLHP81277 87 aa6.75□□□□□ -1.33
ARHGEF39-204ENST00000488918 COA6Q5JTJ3 125 aaKnown RBP6.75□□□□□ -1.33
ARHGEF39-204ENST00000488918 HERC1Q15751 4861 aa6.75□□□□□ -1.33
ARHGEF39-204ENST00000488918 E9PLD3 99 aa6.74□□□□□ -1.33
ARHGEF39-204ENST00000488918 DAND5Q8N907 189 aa6.74□□□□□ -1.33
ARHGEF39-204ENST00000488918 HIGD2AQ9BW72 106 aa6.74□□□□□ -1.33
ARHGEF39-204ENST00000488918 CBY1Q9Y3M2 126 aa6.74□□□□□ -1.33
ARHGEF39-204ENST00000488918 PRYO14603 147 aa6.73□□□□□ -1.33
ARHGEF39-204ENST00000488918 TSPEAR-AS2P59090 65 aa6.73□□□□□ -1.33
ARHGEF39-204ENST00000488918 LINC01545Q5VT33 79 aa6.73□□□□□ -1.33
ARHGEF39-204ENST00000488918 TYMSOSQ8TAI1 123 aa6.73□□□□□ -1.33
ARHGEF39-204ENST00000488918 ZNF706Q9Y5V0 76 aaPredicted RBP6.73□□□□□ -1.33
ARHGEF39-204ENST00000488918 ZNF815PA8K554 130 aa6.72□□□□□ -1.33
ARHGEF39-204ENST00000488918 C3orf79P0CE67 100 aa6.72□□□□□ -1.33
ARHGEF39-204ENST00000488918 DDTP30046 118 aa6.72□□□□□ -1.33
ARHGEF39-204ENST00000488918 SCGB1D4Q6XE38 83 aa6.72□□□□□ -1.33
ARHGEF39-204ENST00000488918 SPANXB1Q9NS25 103 aaPredicted RBP6.72□□□□□ -1.33
ARHGEF39-204ENST00000488918 LRP1Q07954 4544 aaKnown RBP6.71□□□□□ -1.34
ARHGEF39-204ENST00000488918 KRTAP1-4P0C5Y4 121 aa6.71□□□□□ -1.34
ARHGEF39-204ENST00000488918 HINT1P49773 126 aaPredicted RBP6.71□□□□□ -1.34
ARHGEF39-204ENST00000488918 NPC2P61916 151 aa6.71□□□□□ -1.34
ARHGEF39-204ENST00000488918 COPS9Q8WXC6 57 aa6.71□□□□□ -1.34
ARHGEF39-204ENST00000488918 A0A0J9YXY3 114 aa6.7□□□□□ -1.34
ARHGEF39-204ENST00000488918 TRBV10-3A0A0K0K1G6 114 aa6.7□□□□□ -1.34
ARHGEF39-204ENST00000488918 TRBV10-2A0A0K0K1G8 114 aa6.7□□□□□ -1.34
ARHGEF39-204ENST00000488918 HSBP1L1C9JCN9 74 aa6.69□□□□□ -1.34
ARHGEF39-204ENST00000488918 NDUFC2O95298 119 aa6.69□□□□□ -1.34
ARHGEF39-204ENST00000488918 FAM229BQ4G0N7 80 aa6.69□□□□□ -1.34
ARHGEF39-204ENST00000488918 HIST3H2BBQ8N257 126 aa6.69□□□□□ -1.34
ARHGEF39-204ENST00000488918 Q8NDZ9 215 aa6.69□□□□□ -1.34
ARHGEF39-204ENST00000488918 OR13C6PQ8NH95 151 aa6.69□□□□□ -1.34
ARHGEF39-204ENST00000488918 KCNQ1DNQ9H478 68 aa6.69□□□□□ -1.34
ARHGEF39-204ENST00000488918 LOC107984156A0A0G2JMH3 177 aa6.68□□□□□ -1.34
ARHGEF39-204ENST00000488918 JOSD1Q15040 202 aaPredicted RBP6.68□□□□□ -1.34
ARHGEF39-204ENST00000488918 ARL17AQ8IVW1 177 aa6.68□□□□□ -1.34
ARHGEF39-204ENST00000488918 LINC00337Q8N6G1 96 aa6.68□□□□□ -1.34
ARHGEF39-204ENST00000488918 PKHD1L1Q86WI1 4243 aa6.68□□□□□ -1.34
ARHGEF39-204ENST00000488918 FAT3Q8TDW7 4589 aa6.67□□□□□ -1.34
ARHGEF39-204ENST00000488918 TIMM17BO60830 172 aa6.67□□□□□ -1.34
ARHGEF39-204ENST00000488918 TSPAN13O95857 204 aa6.67□□□□□ -1.34
ARHGEF39-204ENST00000488918 SMIM6P0DI80 62 aa6.67□□□□□ -1.34
ARHGEF39-204ENST00000488918 KRTAP13-1Q8IUC0 172 aa6.67□□□□□ -1.34
ARHGEF39-204ENST00000488918 ANAPC11Q9NYG5 84 aa6.67□□□□□ -1.34
ARHGEF39-204ENST00000488918 PRR4Q16378 134 aa6.66□□□□□ -1.34
ARHGEF39-204ENST00000488918 C4orf48Q5BLP8 95 aa6.66□□□□□ -1.34
ARHGEF39-204ENST00000488918 SPANXCQ9NY87 97 aa6.66□□□□□ -1.34
ARHGEF39-204ENST00000488918 TRAV23DV6A0A075B6W5 121 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms