RNA–Protein interactions for RNA: ENST00000488857.5

VAMP2-204, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene VAMP2, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-204ENST00000488857 HIST2H2BEQ16778 126 aa13.48□□□□□ -0.25
VAMP2-204ENST00000488857 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.48□□□□□ -0.25
VAMP2-204ENST00000488857 HIST1H2BHQ93079 126 aa13.48□□□□□ -0.25
VAMP2-204ENST00000488857 HIST1H2BNQ99877 126 aa13.48□□□□□ -0.25
VAMP2-204ENST00000488857 HIST1H2BMQ99879 126 aa13.48□□□□□ -0.25
VAMP2-204ENST00000488857 LINC00158P58513 81 aa13.47□□□□□ -0.25
VAMP2-204ENST00000488857 HERV-K104P63124 156 aa13.47□□□□□ -0.25
VAMP2-204ENST00000488857 DPM2O94777 84 aa13.45□□□□□ -0.26
VAMP2-204ENST00000488857 RPL28P46779 137 aaKnown RBP13.45□□□□□ -0.26
VAMP2-204ENST00000488857 NDUFA12Q9UI09 145 aa13.45□□□□□ -0.26
VAMP2-204ENST00000488857 IGLV1-50A0A075B6I6 118 aa13.44□□□□□ -0.26
VAMP2-204ENST00000488857 PRR26Q8N8Z3 221 aa13.44□□□□□ -0.26
VAMP2-204ENST00000488857 Q8NDZ9 215 aa13.44□□□□□ -0.26
VAMP2-204ENST00000488857 LEPROTO15243 131 aa13.43□□□□□ -0.26
VAMP2-204ENST00000488857 MAP1LC3CQ9BXW4 147 aa13.43□□□□□ -0.26
VAMP2-204ENST00000488857 IGKV2-28A0A075B6P5 120 aa13.42□□□□□ -0.26
VAMP2-204ENST00000488857 MYMXA0A1B0GTQ4 84 aa13.42□□□□□ -0.26
VAMP2-204ENST00000488857 LINC00587B1AMM8 73 aa13.42□□□□□ -0.26
VAMP2-204ENST00000488857 IGKV2D-28P01615 120 aa13.42□□□□□ -0.26
VAMP2-204ENST00000488857 IGKCP01834 107 aa13.42□□□□□ -0.26
VAMP2-204ENST00000488857 SMIM13P0DJ93 91 aa13.42□□□□□ -0.26
VAMP2-204ENST00000488857 KRTAP13-1Q8IUC0 172 aa13.42□□□□□ -0.26
VAMP2-204ENST00000488857 PLEKHB2Q96CS7 222 aa13.42□□□□□ -0.26
VAMP2-204ENST00000488857 TSPEAR-AS2P59090 65 aa13.41□□□□□ -0.26
VAMP2-204ENST00000488857 A0A0U1RRA0 63 aa13.4□□□□□ -0.26
VAMP2-204ENST00000488857 MEIG1Q5JSS6 88 aa13.4□□□□□ -0.26
VAMP2-204ENST00000488857 PMCHL2Q9BQD1 86 aa13.4□□□□□ -0.26
VAMP2-204ENST00000488857 HERVK_113P61574 105 aa13.39□□□□□ -0.27
VAMP2-204ENST00000488857 J3QQQ9 107 aa13.38□□□□□ -0.27
VAMP2-204ENST00000488857 ATP6V1G1O75348 118 aa13.38□□□□□ -0.27
VAMP2-204ENST00000488857 MIR7-3HGQ8N6C7 128 aa13.38□□□□□ -0.27
VAMP2-204ENST00000488857 RPL13AP40429 203 aaKnown RBP13.37□□□□□ -0.27
VAMP2-204ENST00000488857 NMUP48645 174 aa13.37□□□□□ -0.27
VAMP2-204ENST00000488857 TMEM126AQ9H061 195 aa13.37□□□□□ -0.27
VAMP2-204ENST00000488857 SYS1-DBNDD2H3BUS1 97 aa13.36□□□□□ -0.27
VAMP2-204ENST00000488857 UBE2AP49459 152 aa13.35□□□□□ -0.27
VAMP2-204ENST00000488857 COA6Q5JTJ3 125 aaKnown RBP13.35□□□□□ -0.27
VAMP2-204ENST00000488857 TMEM238C9JI98 176 aa13.34□□□□□ -0.27
VAMP2-204ENST00000488857 M0R378 163 aa13.34□□□□□ -0.27
VAMP2-204ENST00000488857 BOD1L2Q8IYS8 172 aa13.33□□□□□ -0.28
VAMP2-204ENST00000488857 IGKV2D-26A0A0A0MRZ7 120 aa13.32□□□□□ -0.28
VAMP2-204ENST00000488857 LOC107984156A0A0G2JMH3 177 aa13.32□□□□□ -0.28
VAMP2-204ENST00000488857 LGALS3P17931 250 aaKnown RBP13.32□□□□□ -0.28
VAMP2-204ENST00000488857 ARL17AQ8IVW1 177 aa13.32□□□□□ -0.28
VAMP2-204ENST00000488857 E9PLD3 99 aa13.31□□□□□ -0.28
VAMP2-204ENST00000488857 LINC01545Q5VT33 79 aa13.31□□□□□ -0.28
VAMP2-204ENST00000488857 PET117Q6UWS5 81 aa13.3□□□□□ -0.28
VAMP2-204ENST00000488857 FAM19A1Q7Z5A9 133 aa13.29□□□□□ -0.28
VAMP2-204ENST00000488857 PRLHP81277 87 aa13.28□□□□□ -0.28
VAMP2-204ENST00000488857 UBR4Q5T4S7 5183 aa13.27□□□□□ -0.29
VAMP2-204ENST00000488857 LRP2P98164 4655 aa13.27□□□□□ -0.29
VAMP2-204ENST00000488857 A0A087X002 238 aa13.26□□□□□ -0.29
VAMP2-204ENST00000488857 DAND5Q8N907 189 aa13.26□□□□□ -0.29
VAMP2-204ENST00000488857 PRYO14603 147 aa13.25□□□□□ -0.29
VAMP2-204ENST00000488857 NCR3O14931 201 aa13.25□□□□□ -0.29
VAMP2-204ENST00000488857 CRYGAP11844 174 aa13.25□□□□□ -0.29
VAMP2-204ENST00000488857 KCNQ1DNQ9H478 68 aa13.25□□□□□ -0.29
VAMP2-204ENST00000488857 C3orf79P0CE67 100 aa13.24□□□□□ -0.29
VAMP2-204ENST00000488857 A0A0J9YXY3 114 aa13.23□□□□□ -0.29
VAMP2-204ENST00000488857 FAM229BQ4G0N7 80 aa13.23□□□□□ -0.29
VAMP2-204ENST00000488857 TRBV10-2A0A0K0K1G8 114 aa13.22□□□□□ -0.29
VAMP2-204ENST00000488857 SPRR1AP35321 89 aa13.22□□□□□ -0.29
VAMP2-204ENST00000488857 LINC00337Q8N6G1 96 aa13.21□□□□□ -0.29
VAMP2-204ENST00000488857 TRBV10-3A0A0K0K1G6 114 aa13.2□□□□□ -0.3
VAMP2-204ENST00000488857 MIEN1Q9BRT3 115 aa13.2□□□□□ -0.3
VAMP2-204ENST00000488857 ANAPC11Q9NYG5 84 aa13.2□□□□□ -0.3
VAMP2-204ENST00000488857 KRTAP4-16G5E9R7 235 aaPredicted RBP13.19□□□□□ -0.3
VAMP2-204ENST00000488857 NDUFC2O95298 119 aa13.19□□□□□ -0.3
VAMP2-204ENST00000488857 S100A1P23297 94 aa13.19□□□□□ -0.3
VAMP2-204ENST00000488857 ADAMTSL4-AS1Q5T5F5 129 aa13.18□□□□□ -0.3
VAMP2-204ENST00000488857 TYMSOSQ8TAI1 123 aa13.18□□□□□ -0.3
VAMP2-204ENST00000488857 SPANXB1Q9NS25 103 aaPredicted RBP13.18□□□□□ -0.3
VAMP2-204ENST00000488857 KRTDAPP60985 99 aa13.17□□□□□ -0.3
VAMP2-204ENST00000488857 KRTAP13-2Q52LG2 175 aa13.17□□□□□ -0.3
VAMP2-204ENST00000488857 HIGD2AQ9BW72 106 aa13.17□□□□□ -0.3
VAMP2-204ENST00000488857 TIMM17BO60830 172 aa13.15□□□□□ -0.3
VAMP2-204ENST00000488857 S100A12P80511 92 aa13.15□□□□□ -0.3
VAMP2-204ENST00000488857 SOSTDC1Q6X4U4 206 aa13.15□□□□□ -0.3
VAMP2-204ENST00000488857 LITAFQ99732 161 aa13.15□□□□□ -0.3
VAMP2-204ENST00000488857 DDTP30046 118 aa13.14□□□□□ -0.31
VAMP2-204ENST00000488857 C20orf202A1L168 122 aa13.13□□□□□ -0.31
VAMP2-204ENST00000488857 EIF4EBP3O60516 100 aaPredicted RBP13.13□□□□□ -0.31
VAMP2-204ENST00000488857 ETDCA0A1B0GVM5 59 aa13.12□□□□□ -0.31
VAMP2-204ENST00000488857 IGLV6-57P01721 117 aa13.12□□□□□ -0.31
VAMP2-204ENST00000488857 ZNF815PA8K554 130 aa13.11□□□□□ -0.31
VAMP2-204ENST00000488857 SPRR4Q96PI1 79 aa13.11□□□□□ -0.31
VAMP2-204ENST00000488857 ZNF706Q9Y5V0 76 aaPredicted RBP13.1□□□□□ -0.31
VAMP2-204ENST00000488857 AKR1D1P51857 326 aa13.09□□□□□ -0.31
VAMP2-204ENST00000488857 NPC2P61916 151 aa13.09□□□□□ -0.31
VAMP2-204ENST00000488857 TTTY13Q9BZ97 58 aa13.09□□□□□ -0.31
VAMP2-204ENST00000488857 B5MCH6 92 aa13.08□□□□□ -0.32
VAMP2-204ENST00000488857 S100A7L2Q5SY68 101 aa13.08□□□□□ -0.32
VAMP2-204ENST00000488857 LINC00308Q8TCZ7 52 aa13.08□□□□□ -0.32
VAMP2-204ENST00000488857 SMCR5Q8TEV8 140 aa13.08□□□□□ -0.32
VAMP2-204ENST00000488857 SPANXCQ9NY87 97 aa13.07□□□□□ -0.32
VAMP2-204ENST00000488857 ANKRD39Q53RE8 183 aa13.05□□□□□ -0.32
VAMP2-204ENST00000488857 HIST3H2BBQ8N257 126 aa13.05□□□□□ -0.32
VAMP2-204ENST00000488857 LPAP08519 4548 aa13.05□□□□□ -0.32
VAMP2-204ENST00000488857 TRAV23DV6A0A075B6W5 121 aa13.04□□□□□ -0.32
VAMP2-204ENST00000488857 TSPAN13O95857 204 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 176.4 ms