RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 ATRQ13535 2644 aa11.2□□□□□ -0.62
MCF2L-229ENST00000488765 NREPQ16612 68 aa11.2□□□□□ -0.62
MCF2L-229ENST00000488765 TEP1Q99973 2627 aaKnown RBP11.2□□□□□ -0.62
MCF2L-229ENST00000488765 IGHV3OR16-9A0A0B4J2B5 98 aa11.19□□□□□ -0.62
MCF2L-229ENST00000488765 Q8NDZ9 215 aa11.19□□□□□ -0.62
MCF2L-229ENST00000488765 Q6ZQY7 126 aa11.18□□□□□ -0.62
MCF2L-229ENST00000488765 IGHV4-31P0DP07 118 aa11.18□□□□□ -0.62
MCF2L-229ENST00000488765 HIGD2AQ9BW72 106 aa11.18□□□□□ -0.62
MCF2L-229ENST00000488765 LINC00269Q8N2A0 174 aa11.17□□□□□ -0.62
MCF2L-229ENST00000488765 F8P00451 2351 aa11.16□□□□□ -0.62
MCF2L-229ENST00000488765 BPY2O14599 106 aa11.16□□□□□ -0.62
MCF2L-229ENST00000488765 DEFB113Q30KQ7 82 aa11.16□□□□□ -0.62
MCF2L-229ENST00000488765 INSP01308 110 aa11.15□□□□□ -0.62
MCF2L-229ENST00000488765 CELA1Q9UNI1 258 aa11.15□□□□□ -0.62
MCF2L-229ENST00000488765 TRBV7-4A0A0J9YYF1 115 aa11.15□□□□□ -0.62
MCF2L-229ENST00000488765 TRBV10-3A0A0K0K1G6 114 aa11.15□□□□□ -0.62
MCF2L-229ENST00000488765 H3BUA1 57 aa11.15□□□□□ -0.62
MCF2L-229ENST00000488765 TMEM89A2RUT3 159 aa11.14□□□□□ -0.63
MCF2L-229ENST00000488765 A8MU10 97 aa11.14□□□□□ -0.63
MCF2L-229ENST00000488765 DSCR9P59020 149 aa11.14□□□□□ -0.63
MCF2L-229ENST00000488765 MAP6D1Q9H9H5 199 aa11.14□□□□□ -0.63
MCF2L-229ENST00000488765 RETNQ9HD89 108 aa11.14□□□□□ -0.63
MCF2L-229ENST00000488765 LINC01006Q8NI28 216 aa11.13□□□□□ -0.63
MCF2L-229ENST00000488765 TRGV4A0A0C4DH28 118 aa11.13□□□□□ -0.63
MCF2L-229ENST00000488765 FUSP35637 526 aaKnown RBP eCLIP11.13□□□□□ -0.63
MCF2L-229ENST00000488765 C1orf158Q8N1D5 194 aa11.13□□□□□ -0.63
MCF2L-229ENST00000488765 PMAIP1Q13794 54 aa11.12□□□□□ -0.63
MCF2L-229ENST00000488765 DYNLRB2Q8TF09 96 aa11.12□□□□□ -0.63
MCF2L-229ENST00000488765 LY6G6DO95868 133 aa11.11□□□□□ -0.63
MCF2L-229ENST00000488765 FAM19A3Q7Z5A8 133 aa11.11□□□□□ -0.63
MCF2L-229ENST00000488765 ESRGQ1W209 222 aa11.11□□□□□ -0.63
MCF2L-229ENST00000488765 SMR3AQ99954 134 aa11.1□□□□□ -0.63
MCF2L-229ENST00000488765 ZNF702PQ9H963 129 aa11.1□□□□□ -0.63
MCF2L-229ENST00000488765 OTOGQ6ZRI0 2925 aa11.1□□□□□ -0.63
MCF2L-229ENST00000488765 LINC00959A0A1B0GUT2 108 aa11.09□□□□□ -0.63
MCF2L-229ENST00000488765 LINC00575Q6W349 94 aa11.09□□□□□ -0.63
MCF2L-229ENST00000488765 Q6YL49 198 aa11.09□□□□□ -0.63
MCF2L-229ENST00000488765 STHQ8IWL8 128 aa11.09□□□□□ -0.63
MCF2L-229ENST00000488765 WFDC10AQ9H1F0 79 aa11.09□□□□□ -0.63
MCF2L-229ENST00000488765 VWFP04275 2813 aa11.09□□□□□ -0.63
MCF2L-229ENST00000488765 IGHV4-28A0A0C4DH34 117 aa11.08□□□□□ -0.64
MCF2L-229ENST00000488765 FAM30AQ9NZY2 134 aa11.08□□□□□ -0.64
MCF2L-229ENST00000488765 C3orf84H3BNL1 204 aa11.07□□□□□ -0.64
MCF2L-229ENST00000488765 DEFB130BP0DP73 79 aa11.07□□□□□ -0.64
MCF2L-229ENST00000488765 DEFB130AP0DP74 79 aa11.07□□□□□ -0.64
MCF2L-229ENST00000488765 LINC00167Q96N53 147 aa11.07□□□□□ -0.64
MCF2L-229ENST00000488765 ZNF561-AS1K7EIQ3 104 aa11.07□□□□□ -0.64
MCF2L-229ENST00000488765 MUC7Q8TAX7 377 aa11.07□□□□□ -0.64
MCF2L-229ENST00000488765 PRYO14603 147 aa11.07□□□□□ -0.64
MCF2L-229ENST00000488765 C6orf223Q8N319 242 aa11.06□□□□□ -0.64
MCF2L-229ENST00000488765 CD164L2Q6UWJ8 174 aa11.05□□□□□ -0.64
MCF2L-229ENST00000488765 ESM1Q9NQ30 184 aa11.05□□□□□ -0.64
MCF2L-229ENST00000488765 TRBV6-8A0A0A6YYG3 113 aa11.05□□□□□ -0.64
MCF2L-229ENST00000488765 NDUFC1O43677 76 aa11.04□□□□□ -0.64
MCF2L-229ENST00000488765 C10orf25Q5T742 122 aa11.04□□□□□ -0.64
MCF2L-229ENST00000488765 XAGE1AQ9HD64 81 aa11.04□□□□□ -0.64
MCF2L-229ENST00000488765 KLK12Q9UKR0 248 aa11.03□□□□□ -0.64
MCF2L-229ENST00000488765 Q6ZTC4 211 aa11.02□□□□□ -0.64
MCF2L-229ENST00000488765 ODF3L2Q3SX64 289 aa11.01□□□□□ -0.65
MCF2L-229ENST00000488765 CXCL6P80162 114 aa11.01□□□□□ -0.65
MCF2L-229ENST00000488765 PDZD2O15018 2839 aa11□□□□□ -0.65
MCF2L-229ENST00000488765 TENM1Q9UKZ4 2725 aa11□□□□□ -0.65
MCF2L-229ENST00000488765 DNAJC9-AS1A6NH13 148 aa10.99□□□□□ -0.65
MCF2L-229ENST00000488765 UNQ6190/PRO20217Q6UXQ8 127 aa10.99□□□□□ -0.65
MCF2L-229ENST00000488765 Q6ZRP5 223 aa10.99□□□□□ -0.65
MCF2L-229ENST00000488765 LOC110117498A0A087WWA1 95 aa10.99□□□□□ -0.65
MCF2L-229ENST00000488765 DEFB105AQ8NG35 78 aa10.97□□□□□ -0.65
MCF2L-229ENST00000488765 C1orf64Q8NEQ6 169 aa10.97□□□□□ -0.65
MCF2L-229ENST00000488765 HIVEP1P15822 2718 aa10.96□□□□□ -0.65
MCF2L-229ENST00000488765 PLAC8L1A1L4L8 177 aa10.96□□□□□ -0.66
MCF2L-229ENST00000488765 DEFB114Q30KQ6 69 aa10.96□□□□□ -0.66
MCF2L-229ENST00000488765 BCE1O60756 84 aa10.95□□□□□ -0.66
MCF2L-229ENST00000488765 KRTAP1-3Q8IUG1 177 aa10.95□□□□□ -0.66
MCF2L-229ENST00000488765 ATP5EP56381 51 aaPredicted RBP10.94□□□□□ -0.66
MCF2L-229ENST00000488765 SMIM29Q86T20 159 aa10.94□□□□□ -0.66
MCF2L-229ENST00000488765 Q8IZM0 81 aa10.94□□□□□ -0.66
MCF2L-229ENST00000488765 A8MUN3 132 aa10.94□□□□□ -0.66
MCF2L-229ENST00000488765 GYPEP15421 78 aa10.94□□□□□ -0.66
MCF2L-229ENST00000488765 LINC00612Q8N6U2 182 aa10.94□□□□□ -0.66
MCF2L-229ENST00000488765 OCR1Q9BZK8 76 aa10.94□□□□□ -0.66
MCF2L-229ENST00000488765 ANGP03950 147 aaKnown RBP10.93□□□□□ -0.66
MCF2L-229ENST00000488765 CCL24O00175 119 aa10.93□□□□□ -0.66
MCF2L-229ENST00000488765 IGKV4-1P06312 121 aa10.93□□□□□ -0.66
MCF2L-229ENST00000488765 SPTSSBQ8NFR3 76 aa10.93□□□□□ -0.66
MCF2L-229ENST00000488765 MAST4O15021 2626 aa10.91□□□□□ -0.66
MCF2L-229ENST00000488765 TRRAPQ9Y4A5 3859 aa10.91□□□□□ -0.66
MCF2L-229ENST00000488765 J3QKU1 62 aa10.91□□□□□ -0.66
MCF2L-229ENST00000488765 KIAA0087Q14695 138 aa10.91□□□□□ -0.66
MCF2L-229ENST00000488765 CHCHD10Q8WYQ3 142 aaPredicted RBP10.91□□□□□ -0.66
MCF2L-229ENST00000488765 DEFB116Q30KQ4 102 aa10.9□□□□□ -0.66
MCF2L-229ENST00000488765 TRAV22A0A0B4J277 110 aa10.9□□□□□ -0.66
MCF2L-229ENST00000488765 FSHBP01225 129 aa10.9□□□□□ -0.66
MCF2L-229ENST00000488765 STAB1Q9NY15 2570 aa10.9□□□□□ -0.66
MCF2L-229ENST00000488765 hDV103S1A0JD37 113 aa10.89□□□□□ -0.67
MCF2L-229ENST00000488765 PRR15Q8IV56 129 aa10.89□□□□□ -0.67
MCF2L-229ENST00000488765 NOTCH1P46531 2555 aa10.89□□□□□ -0.67
MCF2L-229ENST00000488765 NSD1Q96L73 2696 aaPredicted RBP10.89□□□□□ -0.67
MCF2L-229ENST00000488765 DEFB4AO15263 64 aa10.88□□□□□ -0.67
MCF2L-229ENST00000488765 C4orf3Q8WVX3 66 aa10.87□□□□□ -0.67
MCF2L-229ENST00000488765 DIRC1Q969H9 104 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms