RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 ARL17AQ8IVW1 177 aa1.07□□□□□ -2.24
ITGB1-214ENST00000488427 SFRP2Q96HF1 295 aa1.07□□□□□ -2.24
ITGB1-214ENST00000488427 TP53RKQ96S44 253 aa1.07□□□□□ -2.24
ITGB1-214ENST00000488427 VCX3BQ9H321 246 aa1.07□□□□□ -2.24
ITGB1-214ENST00000488427 TMEM242Q9NWH2 141 aa1.07□□□□□ -2.24
ITGB1-214ENST00000488427 H3BVH4 76 aa1.06□□□□□ -2.24
ITGB1-214ENST00000488427 M0R381 172 aa1.06□□□□□ -2.24
ITGB1-214ENST00000488427 SULT1A3P0DMM9 295 aa1.06□□□□□ -2.24
ITGB1-214ENST00000488427 SULT1A4P0DMN0 295 aa1.06□□□□□ -2.24
ITGB1-214ENST00000488427 MYL12AP19105 171 aa1.06□□□□□ -2.24
ITGB1-214ENST00000488427 HIST1H4AP62805 103 aaKnown RBP1.06□□□□□ -2.24
ITGB1-214ENST00000488427 KTN1-AS1Q86SY8 53 aa1.06□□□□□ -2.24
ITGB1-214ENST00000488427 TERB2Q8NHR7 220 aa1.06□□□□□ -2.24
ITGB1-214ENST00000488427 C3orf85A0A1B0GTC6 90 aa1.05□□□□□ -2.24
ITGB1-214ENST00000488427 PMP2P02689 132 aa1.05□□□□□ -2.24
ITGB1-214ENST00000488427 PYYP10082 97 aa1.05□□□□□ -2.24
ITGB1-214ENST00000488427 DNAL1Q4LDG9 190 aa1.05□□□□□ -2.24
ITGB1-214ENST00000488427 C9orf153Q5TBE3 101 aa1.05□□□□□ -2.24
ITGB1-214ENST00000488427 C12orf45Q8N5I9 185 aaPredicted RBP1.05□□□□□ -2.24
ITGB1-214ENST00000488427 OBSCN-AS1Q96MR7 158 aa1.05□□□□□ -2.24
ITGB1-214ENST00000488427 SPRR2GQ9BYE4 73 aa1.05□□□□□ -2.24
ITGB1-214ENST00000488427 XAGE1AQ9HD64 81 aa1.05□□□□□ -2.24
ITGB1-214ENST00000488427 TRBV30A0A0K0K1B3 111 aa1.04□□□□□ -2.24
ITGB1-214ENST00000488427 HMSDA8MTL9 139 aa1.04□□□□□ -2.24
ITGB1-214ENST00000488427 ARMS2P0C7Q2 107 aa1.04□□□□□ -2.24
ITGB1-214ENST00000488427 IAPPP10997 89 aa1.04□□□□□ -2.24
ITGB1-214ENST00000488427 TPT1P13693 172 aaKnown RBP1.04□□□□□ -2.24
ITGB1-214ENST00000488427 ZNF25P17030 456 aaPredicted RBP1.04□□□□□ -2.24
ITGB1-214ENST00000488427 FGF7P21781 194 aa1.04□□□□□ -2.24
ITGB1-214ENST00000488427 COTL1Q14019 142 aa1.04□□□□□ -2.24
ITGB1-214ENST00000488427 C5orf38Q86SI9 138 aa1.04□□□□□ -2.24
ITGB1-214ENST00000488427 MBD3L1Q8WWY6 194 aa1.04□□□□□ -2.24
ITGB1-214ENST00000488427 NMES1Q9C002 83 aa1.04□□□□□ -2.24
ITGB1-214ENST00000488427 TMEM126AQ9H061 195 aa1.04□□□□□ -2.24
ITGB1-214ENST00000488427 LYRM2Q9NU23 88 aaPredicted RBP1.04□□□□□ -2.24
ITGB1-214ENST00000488427 TMEM14CQ9P0S9 112 aa1.04□□□□□ -2.24
ITGB1-214ENST00000488427 AP4S1Q9Y587 144 aa1.04□□□□□ -2.24
ITGB1-214ENST00000488427 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.03□□□□□ -2.24
ITGB1-214ENST00000488427 FAM236AA0A1B0GUQ0 79 aa1.03□□□□□ -2.24
ITGB1-214ENST00000488427 FAM236BA0A1B0GV22 79 aa1.03□□□□□ -2.24
ITGB1-214ENST00000488427 ZNF727A8MUV8 499 aa1.03□□□□□ -2.24
ITGB1-214ENST00000488427 C1orf196B1AJZ1 125 aa1.03□□□□□ -2.24
ITGB1-214ENST00000488427 TMEM238C9JI98 176 aa1.03□□□□□ -2.24
ITGB1-214ENST00000488427 ERC2-IT1O76042 136 aa1.03□□□□□ -2.24
ITGB1-214ENST00000488427 RPL12P30050 165 aaKnown RBP1.03□□□□□ -2.24
ITGB1-214ENST00000488427 FABP5Q01469 135 aa1.03□□□□□ -2.24
ITGB1-214ENST00000488427 HRCT1Q6UXD1 115 aa1.03□□□□□ -2.24
ITGB1-214ENST00000488427 PACRGLQ8N7B6 248 aa1.03□□□□□ -2.24
ITGB1-214ENST00000488427 PFDN5Q99471 154 aa1.03□□□□□ -2.24
ITGB1-214ENST00000488427 SPANXB1Q9NS25 103 aaPredicted RBP1.03□□□□□ -2.24
ITGB1-214ENST00000488427 COPZ2Q9P299 210 aa1.03□□□□□ -2.24
ITGB1-214ENST00000488427 IRGMA1A4Y4 181 aa1.02□□□□□ -2.25
ITGB1-214ENST00000488427 FAM25EA8MYX2 175 aa1.02□□□□□ -2.25
ITGB1-214ENST00000488427 NBEAP1P0C6P0 100 aa1.02□□□□□ -2.25
ITGB1-214ENST00000488427 MAGOHP61326 146 aaKnown RBP1.02□□□□□ -2.25
ITGB1-214ENST00000488427 RRAS2P62070 204 aaPredicted RBP1.02□□□□□ -2.25
ITGB1-214ENST00000488427 SMCO1Q147U7 214 aa1.02□□□□□ -2.25
ITGB1-214ENST00000488427 SPANXN5Q5MJ07 72 aa1.02□□□□□ -2.25
ITGB1-214ENST00000488427 C1orf195Q5TG92 126 aa1.02□□□□□ -2.25
ITGB1-214ENST00000488427 KRTAP19-3Q7Z4W3 81 aa1.02□□□□□ -2.25
ITGB1-214ENST00000488427 CROCCP2Q86T23 111 aa1.02□□□□□ -2.25
ITGB1-214ENST00000488427 SPATA24Q86W54 205 aa1.02□□□□□ -2.25
ITGB1-214ENST00000488427 CLVS1Q8IUQ0 354 aaPredicted RBP1.02□□□□□ -2.25
ITGB1-214ENST00000488427 SYNE1Q8NF91 8797 aaKnown RBP1.02□□□□□ -2.25
ITGB1-214ENST00000488427 CIB3Q96Q77 187 aaPredicted RBP1.02□□□□□ -2.25
ITGB1-214ENST00000488427 ARL2-SNX15V9GYD0 113 aa1.02□□□□□ -2.25
ITGB1-214ENST00000488427 EFCAB10A6NFE3 127 aa1.01□□□□□ -2.25
ITGB1-214ENST00000488427 IFITM5A6NNB3 132 aa1.01□□□□□ -2.25
ITGB1-214ENST00000488427 M0R378 163 aa1.01□□□□□ -2.25
ITGB1-214ENST00000488427 SMIM17P0DL12 118 aa1.01□□□□□ -2.25
ITGB1-214ENST00000488427 NCS1P62166 190 aa1.01□□□□□ -2.25
ITGB1-214ENST00000488427 RANP62826 216 aaKnown RBP1.01□□□□□ -2.25
ITGB1-214ENST00000488427 GOLT1AQ6ZVE7 132 aa1.01□□□□□ -2.25
ITGB1-214ENST00000488427 AKAP14Q86UN6 197 aa1.01□□□□□ -2.25
ITGB1-214ENST00000488427 DEFB107AQ8IZN7 70 aa1.01□□□□□ -2.25
ITGB1-214ENST00000488427 HYLS1Q96M11 299 aa1.01□□□□□ -2.25
ITGB1-214ENST00000488427 RSL24D1Q9UHA3 163 aaKnown RBP1.01□□□□□ -2.25
ITGB1-214ENST00000488427 H7C2G1 150 aa1□□□□□ -2.25
ITGB1-214ENST00000488427 PDCD5O14737 125 aa1□□□□□ -2.25
ITGB1-214ENST00000488427 TMBIM6P55061 237 aa1□□□□□ -2.25
ITGB1-214ENST00000488427 FOXA3P55318 350 aaPredicted RBP1□□□□□ -2.25
ITGB1-214ENST00000488427 DEFA3P59666 94 aa1□□□□□ -2.25
ITGB1-214ENST00000488427 MT1XP80297 61 aa1□□□□□ -2.25
ITGB1-214ENST00000488427 SMAGPQ0VAQ4 97 aa1□□□□□ -2.25
ITGB1-214ENST00000488427 C2orf82Q6UX34 121 aa1□□□□□ -2.25
ITGB1-214ENST00000488427 TRAV13-1A0A0B4J241 112 aa0.99□□□□□ -2.25
ITGB1-214ENST00000488427 HSBP1L1C9JCN9 74 aa0.99□□□□□ -2.25
ITGB1-214ENST00000488427 M0QY20 66 aa0.99□□□□□ -2.25
ITGB1-214ENST00000488427 NCR2O95944 276 aa0.99□□□□□ -2.25
ITGB1-214ENST00000488427 MGPP08493 103 aa0.99□□□□□ -2.25
ITGB1-214ENST00000488427 DDTP30046 118 aa0.99□□□□□ -2.25
ITGB1-214ENST00000488427 FAM74A1Q5RGS3 127 aa0.99□□□□□ -2.25
ITGB1-214ENST00000488427 MIC13Q5XKP0 118 aa0.99□□□□□ -2.25
ITGB1-214ENST00000488427 TMEM91Q6ZNR0 172 aa0.99□□□□□ -2.25
ITGB1-214ENST00000488427 MGST2Q99735 147 aa0.99□□□□□ -2.25
ITGB1-214ENST00000488427 CDC42SE2Q9NRR3 84 aa0.99□□□□□ -2.25
ITGB1-214ENST00000488427 TRAV7A0A075B6U4 112 aa0.98□□□□□ -2.25
ITGB1-214ENST00000488427 C9orf170A2RU37 121 aa0.98□□□□□ -2.25
ITGB1-214ENST00000488427 FABP5P3A8MUU1 101 aa0.98□□□□□ -2.25
ITGB1-214ENST00000488427 PLA2G10O15496 165 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms