RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 NDUFA5Q16718 116 aa11.35□□□□□ -0.59
CD55-209ENST00000488171 LCE2CQ5TA81 110 aa11.35□□□□□ -0.59
CD55-209ENST00000488171 CHTOPQ9Y3Y2 248 aaKnown RBP11.35□□□□□ -0.59
CD55-209ENST00000488171 TMEM238C9JI98 176 aa11.34□□□□□ -0.59
CD55-209ENST00000488171 RPL24P83731 157 aaKnown RBP11.34□□□□□ -0.59
CD55-209ENST00000488171 KRTAP13-2Q52LG2 175 aa11.34□□□□□ -0.59
CD55-209ENST00000488171 SFTA2Q6UW10 78 aa11.34□□□□□ -0.59
CD55-209ENST00000488171 PRLHP81277 87 aa11.33□□□□□ -0.6
CD55-209ENST00000488171 TMEM126AQ9H061 195 aa11.33□□□□□ -0.6
CD55-209ENST00000488171 CHCHD1Q96BP2 118 aaKnown RBP11.32□□□□□ -0.6
CD55-209ENST00000488171 TRAV12-1A0A0B4J245 112 aa11.31□□□□□ -0.6
CD55-209ENST00000488171 TMEM223A0PJW6 202 aa11.31□□□□□ -0.6
CD55-209ENST00000488171 M0R378 163 aa11.31□□□□□ -0.6
CD55-209ENST00000488171 FAM19A1Q7Z5A9 133 aa11.31□□□□□ -0.6
CD55-209ENST00000488171 FAM229BQ4G0N7 80 aa11.3□□□□□ -0.6
CD55-209ENST00000488171 IFI27L1Q96BM0 104 aa11.3□□□□□ -0.6
CD55-209ENST00000488171 LINC00158P58513 81 aa11.28□□□□□ -0.6
CD55-209ENST00000488171 A0A0U1RRA0 63 aa11.27□□□□□ -0.61
CD55-209ENST00000488171 FAM19A2Q8N3H0 131 aa11.25□□□□□ -0.61
CD55-209ENST00000488171 CBLN2Q8IUK8 224 aa11.24□□□□□ -0.61
CD55-209ENST00000488171 PLEKHB2Q96CS7 222 aa11.24□□□□□ -0.61
CD55-209ENST00000488171 IGKV2D-26A0A0A0MRZ7 120 aa11.23□□□□□ -0.61
CD55-209ENST00000488171 SMIM13P0DJ93 91 aa11.23□□□□□ -0.61
CD55-209ENST00000488171 LINC00304Q8N9R0 145 aa11.23□□□□□ -0.61
CD55-209ENST00000488171 HSBP1O75506 76 aa11.22□□□□□ -0.61
CD55-209ENST00000488171 HIGD2AQ9BW72 106 aa11.2□□□□□ -0.62
CD55-209ENST00000488171 HERV-K104P63124 156 aa11.19□□□□□ -0.62
CD55-209ENST00000488171 MEIG1Q5JSS6 88 aa11.19□□□□□ -0.62
CD55-209ENST00000488171 BOD1L2Q8IYS8 172 aa11.19□□□□□ -0.62
CD55-209ENST00000488171 MIR7-3HGQ8N6C7 128 aa11.19□□□□□ -0.62
CD55-209ENST00000488171 RETNLBQ9BQ08 111 aa11.19□□□□□ -0.62
CD55-209ENST00000488171 ATP6V1G1O75348 118 aa11.18□□□□□ -0.62
CD55-209ENST00000488171 TRGC2P03986 189 aa11.18□□□□□ -0.62
CD55-209ENST00000488171 LINC00310P59036 64 aa11.18□□□□□ -0.62
CD55-209ENST00000488171 C3orf22Q8N5N4 141 aa11.18□□□□□ -0.62
CD55-209ENST00000488171 NDUFA12Q9UI09 145 aa11.18□□□□□ -0.62
CD55-209ENST00000488171 H0Y8G0 127 aa11.16□□□□□ -0.62
CD55-209ENST00000488171 NCR3O14931 201 aa11.16□□□□□ -0.62
CD55-209ENST00000488171 MUC2Q02817 5179 aa11.16□□□□□ -0.62
CD55-209ENST00000488171 PRYO14603 147 aa11.16□□□□□ -0.62
CD55-209ENST00000488171 SERF1AO75920 110 aa11.16□□□□□ -0.62
CD55-209ENST00000488171 TSPEAR-AS2P59090 65 aa11.16□□□□□ -0.62
CD55-209ENST00000488171 SPRR4Q96PI1 79 aa11.16□□□□□ -0.62
CD55-209ENST00000488171 MYMXA0A1B0GTQ4 84 aa11.15□□□□□ -0.63
CD55-209ENST00000488171 LINC00587B1AMM8 73 aa11.15□□□□□ -0.63
CD55-209ENST00000488171 LEPROTL1O95214 131 aa11.15□□□□□ -0.63
CD55-209ENST00000488171 SPRR1AP35321 89 aa11.15□□□□□ -0.63
CD55-209ENST00000488171 CTAG1AP78358 180 aa11.14□□□□□ -0.63
CD55-209ENST00000488171 KCNQ1DNQ9H478 68 aa11.14□□□□□ -0.63
CD55-209ENST00000488171 KRTAP4-16G5E9R7 235 aaPredicted RBP11.13□□□□□ -0.63
CD55-209ENST00000488171 LINC00337Q8N6G1 96 aa11.13□□□□□ -0.63
CD55-209ENST00000488171 LEPROTO15243 131 aa11.12□□□□□ -0.63
CD55-209ENST00000488171 TRBV10-3A0A0K0K1G6 114 aa11.11□□□□□ -0.63
CD55-209ENST00000488171 LORP23490 312 aaPredicted RBP11.11□□□□□ -0.63
CD55-209ENST00000488171 MAP1LC3CQ9BXW4 147 aa11.11□□□□□ -0.63
CD55-209ENST00000488171 PLNP26678 52 aa11.1□□□□□ -0.63
CD55-209ENST00000488171 ZNF706Q9Y5V0 76 aaPredicted RBP11.1□□□□□ -0.63
CD55-209ENST00000488171 LOC107984156A0A0G2JMH3 177 aa11.09□□□□□ -0.63
CD55-209ENST00000488171 ARL17AQ8IVW1 177 aa11.09□□□□□ -0.63
CD55-209ENST00000488171 DAND5Q8N907 189 aa11.09□□□□□ -0.63
CD55-209ENST00000488171 TPRXLQ17RH7 258 aa11.08□□□□□ -0.64
CD55-209ENST00000488171 SMCR5Q8TEV8 140 aa11.08□□□□□ -0.64
CD55-209ENST00000488171 HSPB8Q9UJY1 196 aa11.08□□□□□ -0.64
CD55-209ENST00000488171 IGLV7-46A0A075B6I9 117 aa11.07□□□□□ -0.64
CD55-209ENST00000488171 ETDCA0A1B0GVM5 59 aa11.07□□□□□ -0.64
CD55-209ENST00000488171 J3QQQ9 107 aa11.07□□□□□ -0.64
CD55-209ENST00000488171 DPM2O94777 84 aa11.07□□□□□ -0.64
CD55-209ENST00000488171 FABP4P15090 132 aa11.07□□□□□ -0.64
CD55-209ENST00000488171 PMCHL2Q9BQD1 86 aa11.07□□□□□ -0.64
CD55-209ENST00000488171 SPAG11AQ6PDA7 123 aa11.06□□□□□ -0.64
CD55-209ENST00000488171 COLCA2A8K830 154 aa11.05□□□□□ -0.64
CD55-209ENST00000488171 SLC7A5P1Q8MH63 180 aa11.05□□□□□ -0.64
CD55-209ENST00000488171 B5MCH6 92 aa11.04□□□□□ -0.64
CD55-209ENST00000488171 HERVK_113P61574 105 aa11.04□□□□□ -0.64
CD55-209ENST00000488171 PPDPFQ9H3Y8 114 aa11.04□□□□□ -0.64
CD55-209ENST00000488171 TRBV10-2A0A0K0K1G8 114 aa11.03□□□□□ -0.64
CD55-209ENST00000488171 IGKCP01834 107 aa11.03□□□□□ -0.64
CD55-209ENST00000488171 NMUP48645 174 aa11.03□□□□□ -0.64
CD55-209ENST00000488171 CDIP1Q9H305 208 aa11.03□□□□□ -0.64
CD55-209ENST00000488171 DDTP30046 118 aa11.03□□□□□ -0.64
CD55-209ENST00000488171 LINC00483Q53H64 154 aa11.03□□□□□ -0.64
CD55-209ENST00000488171 Q8NBF4 154 aa11.03□□□□□ -0.64
CD55-209ENST00000488171 LGALS3P17931 250 aaKnown RBP11.02□□□□□ -0.65
CD55-209ENST00000488171 S100A12P80511 92 aa11.02□□□□□ -0.65
CD55-209ENST00000488171 A0A0U1RQV1 116 aa11.01□□□□□ -0.65
CD55-209ENST00000488171 ERC2-IT1O76042 136 aa11.01□□□□□ -0.65
CD55-209ENST00000488171 SPANXB1Q9NS25 103 aaPredicted RBP11.01□□□□□ -0.65
CD55-209ENST00000488171 Q9BRP9 147 aa11□□□□□ -0.65
CD55-209ENST00000488171 NDUFC2O95298 119 aa10.99□□□□□ -0.65
CD55-209ENST00000488171 GAGE2AQ6NT46 116 aa10.99□□□□□ -0.65
CD55-209ENST00000488171 MIEN1Q9BRT3 115 aa10.99□□□□□ -0.65
CD55-209ENST00000488171 MUC17Q685J3 4493 aa10.98□□□□□ -0.65
CD55-209ENST00000488171 IGLV6-57P01721 117 aa10.98□□□□□ -0.65
CD55-209ENST00000488171 SOSTDC1Q6X4U4 206 aa10.98□□□□□ -0.65
CD55-209ENST00000488171 EIF4EBP3O60516 100 aaPredicted RBP10.97□□□□□ -0.65
CD55-209ENST00000488171 ADAMTSL4-AS1Q5T5F5 129 aa10.97□□□□□ -0.65
CD55-209ENST00000488171 Q6ZRX8 168 aa10.97□□□□□ -0.65
CD55-209ENST00000488171 A0A0J9YXY3 114 aa10.96□□□□□ -0.65
CD55-209ENST00000488171 E9PLD3 99 aa10.96□□□□□ -0.65
CD55-209ENST00000488171 FP248Q71RG6 208 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms