RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 ADAMTSL4-AS1Q5T5F5 129 aa8.88□□□□□ -0.99
NUP188-207ENST00000487952 NKAPP1Q8N9T2 125 aa8.88□□□□□ -0.99
NUP188-207ENST00000487952 COPS9Q8WXC6 57 aa8.88□□□□□ -0.99
NUP188-207ENST00000487952 LITAFQ99732 161 aa8.88□□□□□ -0.99
NUP188-207ENST00000487952 SPANXDQ9BXN6 97 aa8.88□□□□□ -0.99
NUP188-207ENST00000487952 SPANXCQ9NY87 97 aa8.88□□□□□ -0.99
NUP188-207ENST00000487952 LRP1BQ9NZR2 4599 aa8.88□□□□□ -0.99
NUP188-207ENST00000487952 EPPK1P58107 5090 aaKnown RBP8.87□□□□□ -0.99
NUP188-207ENST00000487952 M0QXV9 152 aa8.87□□□□□ -0.99
NUP188-207ENST00000487952 SRSF9Q13242 221 aaKnown RBP eCLIP8.87□□□□□ -0.99
NUP188-207ENST00000487952 SERTAD4-AS1Q5TG53 156 aa8.87□□□□□ -0.99
NUP188-207ENST00000487952 Q6ZVH6 145 aa8.87□□□□□ -0.99
NUP188-207ENST00000487952 PLA2G2DQ9UNK4 145 aa8.87□□□□□ -0.99
NUP188-207ENST00000487952 LINC00308Q8TCZ7 52 aa8.86□□□□□ -0.99
NUP188-207ENST00000487952 C7orf33Q8WU49 177 aa8.86□□□□□ -0.99
NUP188-207ENST00000487952 TP73-AS1Q9UF72 201 aa8.86□□□□□ -0.99
NUP188-207ENST00000487952 IFITM1P13164 125 aa8.85□□□□□ -0.99
NUP188-207ENST00000487952 LBHQ53QV2 105 aaPredicted RBP8.85□□□□□ -0.99
NUP188-207ENST00000487952 C22orf24Q9Y442 160 aa8.85□□□□□ -0.99
NUP188-207ENST00000487952 IGLV5-37A0A075B6J1 123 aa8.84□□□□□ -0.99
NUP188-207ENST00000487952 LOC107984156A0A0G2JMH3 177 aa8.84□□□□□ -0.99
NUP188-207ENST00000487952 VPREB1P12018 145 aa8.84□□□□□ -0.99
NUP188-207ENST00000487952 PHF5AQ7RTV0 110 aaKnown RBP8.84□□□□□ -0.99
NUP188-207ENST00000487952 ARL17AQ8IVW1 177 aa8.84□□□□□ -0.99
NUP188-207ENST00000487952 SPANXB1Q9NS25 103 aaPredicted RBP8.84□□□□□ -0.99
NUP188-207ENST00000487952 UQCR10Q9UDW1 63 aa8.84□□□□□ -0.99
NUP188-207ENST00000487952 EPM2AB3EWF7 344 aa8.83□□□□□ -1
NUP188-207ENST00000487952 UBE2BP63146 152 aa8.83□□□□□ -1
NUP188-207ENST00000487952 SOSTDC1Q6X4U4 206 aa8.83□□□□□ -1
NUP188-207ENST00000487952 MRPL55Q7Z7F7 128 aaKnown RBP8.83□□□□□ -1
NUP188-207ENST00000487952 HIST1H4GQ99525 98 aa8.83□□□□□ -1
NUP188-207ENST00000487952 C12orf57Q99622 126 aa8.83□□□□□ -1
NUP188-207ENST00000487952 HIGD1BQ9P298 99 aa8.83□□□□□ -1
NUP188-207ENST00000487952 NCR3O14931 201 aa8.82□□□□□ -1
NUP188-207ENST00000487952 SMR3BP02814 79 aaPredicted RBP8.82□□□□□ -1
NUP188-207ENST00000487952 KRTAP7-1Q8IUC3 87 aa8.82□□□□□ -1
NUP188-207ENST00000487952 GAGE10A6NGK3 116 aa8.81□□□□□ -1
NUP188-207ENST00000487952 NDUFC2O95298 119 aa8.81□□□□□ -1
NUP188-207ENST00000487952 MUSTN1Q8IVN3 82 aa8.81□□□□□ -1
NUP188-207ENST00000487952 LINC00528Q8N1L1 170 aa8.81□□□□□ -1
NUP188-207ENST00000487952 DNAH8Q96JB1 4490 aa8.8□□□□□ -1
NUP188-207ENST00000487952 M0R378 163 aa8.8□□□□□ -1
NUP188-207ENST00000487952 EIF4EBP3O60516 100 aaPredicted RBP8.8□□□□□ -1
NUP188-207ENST00000487952 C2orf91Q6ZV80 131 aa8.8□□□□□ -1
NUP188-207ENST00000487952 Q8NDZ9 215 aa8.8□□□□□ -1
NUP188-207ENST00000487952 PRO1933Q9H354 126 aa8.8□□□□□ -1
NUP188-207ENST00000487952 PPDPFQ9H3Y8 114 aa8.8□□□□□ -1
NUP188-207ENST00000487952 BIRC6Q9NR09 4857 aa8.79□□□□□ -1
NUP188-207ENST00000487952 FAM229AH3BQW9 127 aa8.79□□□□□ -1
NUP188-207ENST00000487952 PRR3P79522 188 aaKnown RBP8.79□□□□□ -1
NUP188-207ENST00000487952 LINC00167Q96N53 147 aa8.79□□□□□ -1
NUP188-207ENST00000487952 TRBV10-2A0A0K0K1G8 114 aa8.78□□□□□ -1
NUP188-207ENST00000487952 HNRNPA3P51991 378 aaKnown RBP8.78□□□□□ -1
NUP188-207ENST00000487952 RPL37AP8A6NKH3 93 aa8.77□□□□□ -1.01
NUP188-207ENST00000487952 TSTD3H0UI37 97 aa8.77□□□□□ -1.01
NUP188-207ENST00000487952 RPL37AP61513 92 aaKnown RBP8.77□□□□□ -1.01
NUP188-207ENST00000487952 TAL2Q16559 108 aa8.77□□□□□ -1.01
NUP188-207ENST00000487952 S100A7L2Q5SY68 101 aa8.77□□□□□ -1.01
NUP188-207ENST00000487952 LINC00518Q8N0U6 118 aa8.77□□□□□ -1.01
NUP188-207ENST00000487952 IGKV2-28A0A075B6P5 120 aa8.76□□□□□ -1.01
NUP188-207ENST00000487952 IGKV2D-28P01615 120 aa8.76□□□□□ -1.01
NUP188-207ENST00000487952 APOBP04114 4563 aaKnown RBP8.76□□□□□ -1.01
NUP188-207ENST00000487952 PLA2G1BP04054 148 aaKnown RBP8.75□□□□□ -1.01
NUP188-207ENST00000487952 OR13C6PQ8NH95 151 aa8.75□□□□□ -1.01
NUP188-207ENST00000487952 A4D1N5 150 aa8.74□□□□□ -1.01
NUP188-207ENST00000487952 DDTP30046 118 aa8.74□□□□□ -1.01
NUP188-207ENST00000487952 HSD52Q0P140 79 aa8.74□□□□□ -1.01
NUP188-207ENST00000487952 IGLV1-50A0A075B6I6 118 aa8.73□□□□□ -1.01
NUP188-207ENST00000487952 TRBV10-3A0A0K0K1G6 114 aa8.73□□□□□ -1.01
NUP188-207ENST00000487952 TMEM238LA0A1B0GVL6 79 aa8.73□□□□□ -1.01
NUP188-207ENST00000487952 A6NJY4 79 aa8.73□□□□□ -1.01
NUP188-207ENST00000487952 Q5VSD8 79 aa8.73□□□□□ -1.01
NUP188-207ENST00000487952 CEND1Q8N111 149 aa8.73□□□□□ -1.01
NUP188-207ENST00000487952 Q8N1X5 172 aa8.73□□□□□ -1.01
NUP188-207ENST00000487952 PSORS1C2Q9UIG4 136 aa8.73□□□□□ -1.01
NUP188-207ENST00000487952 CBY1Q9Y3M2 126 aa8.73□□□□□ -1.01
NUP188-207ENST00000487952 C1orf137Q5JT78 98 aa8.72□□□□□ -1.01
NUP188-207ENST00000487952 RYR1P21817 5038 aa8.71□□□□□ -1.02
NUP188-207ENST00000487952 TRAV13-2A0A0B4J235 113 aa8.71□□□□□ -1.02
NUP188-207ENST00000487952 A6NDN8 102 aa8.71□□□□□ -1.02
NUP188-207ENST00000487952 PRYO14603 147 aa8.71□□□□□ -1.02
NUP188-207ENST00000487952 KRTAP11-1Q8IUC1 163 aa8.71□□□□□ -1.02
NUP188-207ENST00000487952 TMEM126AQ9H061 195 aa8.71□□□□□ -1.02
NUP188-207ENST00000487952 REG3GQ6UW15 175 aa8.7□□□□□ -1.02
NUP188-207ENST00000487952 LINC00337Q8N6G1 96 aa8.7□□□□□ -1.02
NUP188-207ENST00000487952 KIAA1109Q2LD37 5005 aa8.69□□□□□ -1.02
NUP188-207ENST00000487952 IGLV6-57P01721 117 aa8.69□□□□□ -1.02
NUP188-207ENST00000487952 KCNQ1DNQ9H478 68 aa8.69□□□□□ -1.02
NUP188-207ENST00000487952 TRAV23DV6A0A075B6W5 121 aa8.68□□□□□ -1.02
NUP188-207ENST00000487952 RAB37Q96AX2 223 aa8.68□□□□□ -1.02
NUP188-207ENST00000487952 ETDCA0A1B0GVM5 59 aa8.67□□□□□ -1.02
NUP188-207ENST00000487952 BCE1O60756 84 aa8.67□□□□□ -1.02
NUP188-207ENST00000487952 UBE2AP49459 152 aa8.67□□□□□ -1.02
NUP188-207ENST00000487952 FXYD2P54710 66 aa8.67□□□□□ -1.02
NUP188-207ENST00000487952 CTAG1AP78358 180 aa8.67□□□□□ -1.02
NUP188-207ENST00000487952 HSPG2P98160 4391 aa8.66□□□□□ -1.02
NUP188-207ENST00000487952 FAM19A1Q7Z5A9 133 aa8.66□□□□□ -1.02
NUP188-207ENST00000487952 A0A0B4J2C4 111 aa8.65□□□□□ -1.02
NUP188-207ENST00000487952 M0R143 59 aa8.65□□□□□ -1.02
NUP188-207ENST00000487952 IGLV7-43P04211 117 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms