RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 HIST1H2BHQ93079 126 aa10.4□□□□□ -0.74
HMG20B-212ENST00000487894 HIST1H2BNQ99877 126 aa10.4□□□□□ -0.74
HMG20B-212ENST00000487894 HIST1H2BMQ99879 126 aa10.4□□□□□ -0.74
HMG20B-212ENST00000487894 HSPB8Q9UJY1 196 aa10.4□□□□□ -0.74
HMG20B-212ENST00000487894 COX17Q14061 63 aa10.39□□□□□ -0.75
HMG20B-212ENST00000487894 MRPL55Q7Z7F7 128 aaKnown RBP10.39□□□□□ -0.75
HMG20B-212ENST00000487894 IGLV5-37A0A075B6J1 123 aa10.38□□□□□ -0.75
HMG20B-212ENST00000487894 LBHQ53QV2 105 aaPredicted RBP10.38□□□□□ -0.75
HMG20B-212ENST00000487894 SND1-IT1Q9HBX3 110 aa10.37□□□□□ -0.75
HMG20B-212ENST00000487894 HMCN2Q8NDA2 5059 aa10.36□□□□□ -0.75
HMG20B-212ENST00000487894 LCE2BO14633 110 aa10.35□□□□□ -0.75
HMG20B-212ENST00000487894 PLNP26678 52 aa10.35□□□□□ -0.75
HMG20B-212ENST00000487894 LINC00167Q96N53 147 aa10.35□□□□□ -0.75
HMG20B-212ENST00000487894 H0Y9J4 135 aa10.34□□□□□ -0.75
HMG20B-212ENST00000487894 NKAPP1Q8N9T2 125 aa10.34□□□□□ -0.75
HMG20B-212ENST00000487894 DIRC1Q969H9 104 aa10.34□□□□□ -0.75
HMG20B-212ENST00000487894 PMCHL2Q9BQD1 86 aa10.34□□□□□ -0.75
HMG20B-212ENST00000487894 GAGE10A6NGK3 116 aa10.33□□□□□ -0.76
HMG20B-212ENST00000487894 DPM2O94777 84 aa10.33□□□□□ -0.76
HMG20B-212ENST00000487894 VPREB1P12018 145 aa10.33□□□□□ -0.76
HMG20B-212ENST00000487894 TSPEAR-AS2P59090 65 aa10.33□□□□□ -0.76
HMG20B-212ENST00000487894 RPL37AP8A6NKH3 93 aa10.32□□□□□ -0.76
HMG20B-212ENST00000487894 KRTAP10-8P60410 259 aa10.32□□□□□ -0.76
HMG20B-212ENST00000487894 Q8NDZ9 215 aa10.32□□□□□ -0.76
HMG20B-212ENST00000487894 MAP1LC3CQ9BXW4 147 aa10.32□□□□□ -0.76
HMG20B-212ENST00000487894 IGKCP01834 107 aa10.31□□□□□ -0.76
HMG20B-212ENST00000487894 LINC00158P58513 81 aa10.31□□□□□ -0.76
HMG20B-212ENST00000487894 NDUFA12Q9UI09 145 aa10.31□□□□□ -0.76
HMG20B-212ENST00000487894 A0A0U1RRA0 63 aa10.3□□□□□ -0.76
HMG20B-212ENST00000487894 LEPROTO15243 131 aa10.3□□□□□ -0.76
HMG20B-212ENST00000487894 SMIM13P0DJ93 91 aa10.3□□□□□ -0.76
HMG20B-212ENST00000487894 HERV-K104P63124 156 aa10.3□□□□□ -0.76
HMG20B-212ENST00000487894 UBR4Q5T4S7 5183 aa10.3□□□□□ -0.76
HMG20B-212ENST00000487894 ZNF861PO60384 105 aa10.29□□□□□ -0.76
HMG20B-212ENST00000487894 BCE1O60756 84 aa10.29□□□□□ -0.76
HMG20B-212ENST00000487894 MEIG1Q5JSS6 88 aa10.29□□□□□ -0.76
HMG20B-212ENST00000487894 PLEKHB2Q96CS7 222 aa10.29□□□□□ -0.76
HMG20B-212ENST00000487894 MYMXA0A1B0GTQ4 84 aa10.28□□□□□ -0.76
HMG20B-212ENST00000487894 HERVK_113P61574 105 aa10.28□□□□□ -0.76
HMG20B-212ENST00000487894 RPL24P83731 157 aaKnown RBP10.28□□□□□ -0.76
HMG20B-212ENST00000487894 COA6Q5JTJ3 125 aaKnown RBP10.28□□□□□ -0.76
HMG20B-212ENST00000487894 IGKV2-28A0A075B6P5 120 aa10.27□□□□□ -0.77
HMG20B-212ENST00000487894 SYS1-DBNDD2H3BUS1 97 aa10.27□□□□□ -0.77
HMG20B-212ENST00000487894 IGKV2D-28P01615 120 aa10.27□□□□□ -0.77
HMG20B-212ENST00000487894 KRTAP1-4P0C5Y4 121 aa10.27□□□□□ -0.77
HMG20B-212ENST00000487894 J3QQQ9 107 aa10.26□□□□□ -0.77
HMG20B-212ENST00000487894 MIR7-3HGQ8N6C7 128 aa10.26□□□□□ -0.77
HMG20B-212ENST00000487894 IGLV1-50A0A075B6I6 118 aa10.25□□□□□ -0.77
HMG20B-212ENST00000487894 LINC01545Q5VT33 79 aa10.24□□□□□ -0.77
HMG20B-212ENST00000487894 LINC00587B1AMM8 73 aa10.23□□□□□ -0.77
HMG20B-212ENST00000487894 RPL28P46779 137 aaKnown RBP10.23□□□□□ -0.77
HMG20B-212ENST00000487894 NMUP48645 174 aa10.23□□□□□ -0.77
HMG20B-212ENST00000487894 KRTAP13-1Q8IUC0 172 aa10.23□□□□□ -0.77
HMG20B-212ENST00000487894 PRR26Q8N8Z3 221 aa10.23□□□□□ -0.77
HMG20B-212ENST00000487894 E9PLD3 99 aa10.22□□□□□ -0.77
HMG20B-212ENST00000487894 C3orf79P0CE67 100 aa10.22□□□□□ -0.77
HMG20B-212ENST00000487894 LGALS3P17931 250 aaKnown RBP10.22□□□□□ -0.77
HMG20B-212ENST00000487894 PET117Q6UWS5 81 aa10.22□□□□□ -0.77
HMG20B-212ENST00000487894 TMEM238C9JI98 176 aa10.21□□□□□ -0.77
HMG20B-212ENST00000487894 BOD1L2Q8IYS8 172 aa10.21□□□□□ -0.77
HMG20B-212ENST00000487894 TMEM126AQ9H061 195 aa10.21□□□□□ -0.77
HMG20B-212ENST00000487894 DAND5Q8N907 189 aa10.2□□□□□ -0.78
HMG20B-212ENST00000487894 M0R378 163 aa10.19□□□□□ -0.78
HMG20B-212ENST00000487894 UBE2AP49459 152 aa10.19□□□□□ -0.78
HMG20B-212ENST00000487894 NCR3O14931 201 aa10.18□□□□□ -0.78
HMG20B-212ENST00000487894 LOC107984156A0A0G2JMH3 177 aa10.17□□□□□ -0.78
HMG20B-212ENST00000487894 KRTDAPP60985 99 aa10.17□□□□□ -0.78
HMG20B-212ENST00000487894 PRLHP81277 87 aa10.17□□□□□ -0.78
HMG20B-212ENST00000487894 ARL17AQ8IVW1 177 aa10.17□□□□□ -0.78
HMG20B-212ENST00000487894 A0A0J9YXY3 114 aa10.16□□□□□ -0.78
HMG20B-212ENST00000487894 LCE2CQ5TA81 110 aa10.16□□□□□ -0.78
HMG20B-212ENST00000487894 FAM19A1Q7Z5A9 133 aa10.16□□□□□ -0.78
HMG20B-212ENST00000487894 IGKV2D-26A0A0A0MRZ7 120 aa10.15□□□□□ -0.78
HMG20B-212ENST00000487894 PRYO14603 147 aa10.13□□□□□ -0.79
HMG20B-212ENST00000487894 RPL13AP40429 203 aaKnown RBP10.13□□□□□ -0.79
HMG20B-212ENST00000487894 A0A087X002 238 aa10.12□□□□□ -0.79
HMG20B-212ENST00000487894 ADAMTSL4-AS1Q5T5F5 129 aa10.12□□□□□ -0.79
HMG20B-212ENST00000487894 TRBV10-3A0A0K0K1G6 114 aa10.11□□□□□ -0.79
HMG20B-212ENST00000487894 SOSTDC1Q6X4U4 206 aa10.11□□□□□ -0.79
HMG20B-212ENST00000487894 MIEN1Q9BRT3 115 aa10.11□□□□□ -0.79
HMG20B-212ENST00000487894 C20orf202A1L168 122 aa10.1□□□□□ -0.79
HMG20B-212ENST00000487894 SPRR1AP35321 89 aa10.1□□□□□ -0.79
HMG20B-212ENST00000487894 LITAFQ99732 161 aa10.1□□□□□ -0.79
HMG20B-212ENST00000487894 TTTY13Q9BZ97 58 aa10.1□□□□□ -0.79
HMG20B-212ENST00000487894 KCNQ1DNQ9H478 68 aa10.1□□□□□ -0.79
HMG20B-212ENST00000487894 TRBV10-2A0A0K0K1G8 114 aa10.09□□□□□ -0.79
HMG20B-212ENST00000487894 NDUFC2O95298 119 aa10.09□□□□□ -0.79
HMG20B-212ENST00000487894 NPC2P61916 151 aa10.09□□□□□ -0.79
HMG20B-212ENST00000487894 HIST3H2BBQ8N257 126 aa10.09□□□□□ -0.79
HMG20B-212ENST00000487894 SPANXB1Q9NS25 103 aaPredicted RBP10.09□□□□□ -0.79
HMG20B-212ENST00000487894 ANAPC11Q9NYG5 84 aa10.09□□□□□ -0.79
HMG20B-212ENST00000487894 ZNF815PA8K554 130 aa10.08□□□□□ -0.8
HMG20B-212ENST00000487894 LINC00337Q8N6G1 96 aa10.08□□□□□ -0.8
HMG20B-212ENST00000487894 KRTAP4-16G5E9R7 235 aaPredicted RBP10.07□□□□□ -0.8
HMG20B-212ENST00000487894 TIMM17BO60830 172 aa10.07□□□□□ -0.8
HMG20B-212ENST00000487894 CRYGAP11844 174 aa10.07□□□□□ -0.8
HMG20B-212ENST00000487894 ATOH7Q8N100 152 aa10.07□□□□□ -0.8
HMG20B-212ENST00000487894 HIGD2AQ9BW72 106 aa10.07□□□□□ -0.8
HMG20B-212ENST00000487894 DDTP30046 118 aa10.06□□□□□ -0.8
HMG20B-212ENST00000487894 FAM229BQ4G0N7 80 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms