RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 C15orf56Q8N910 161 aa13.56□□□□□ -0.24
PHF1-209ENST00000487667 LST1O00453 97 aa13.55□□□□□ -0.24
PHF1-209ENST00000487667 C10orf25Q5T742 122 aa13.54□□□□□ -0.24
PHF1-209ENST00000487667 CDIP1Q9H305 208 aa13.54□□□□□ -0.24
PHF1-209ENST00000487667 STAB2Q8WWQ8 2551 aa13.54□□□□□ -0.24
PHF1-209ENST00000487667 HIGD2BQ4VC39 106 aa13.52□□□□□ -0.25
PHF1-209ENST00000487667 IGKV2-28A0A075B6P5 120 aa13.51□□□□□ -0.25
PHF1-209ENST00000487667 IGKV2D-28P01615 120 aa13.51□□□□□ -0.25
PHF1-209ENST00000487667 C9orf116Q5BN46 136 aaPredicted RBP13.51□□□□□ -0.25
PHF1-209ENST00000487667 C6orf48Q9UBA6 75 aa13.51□□□□□ -0.25
PHF1-209ENST00000487667 LINC00526Q96FQ7 95 aa13.51□□□□□ -0.25
PHF1-209ENST00000487667 RPL28P46779 137 aaKnown RBP13.49□□□□□ -0.25
PHF1-209ENST00000487667 LINC00337Q8N6G1 96 aa13.49□□□□□ -0.25
PHF1-209ENST00000487667 SYCNQ0VAF6 134 aa13.47□□□□□ -0.25
PHF1-209ENST00000487667 TTC32Q5I0X7 151 aa13.47□□□□□ -0.25
PHF1-209ENST00000487667 CLEC2BQ92478 149 aa13.47□□□□□ -0.25
PHF1-209ENST00000487667 Q6ZRU5 148 aa13.46□□□□□ -0.25
PHF1-209ENST00000487667 NDUFC2-KCTD14E9PQ53 114 aa13.45□□□□□ -0.26
PHF1-209ENST00000487667 OR13C6PQ8NH95 151 aa13.45□□□□□ -0.26
PHF1-209ENST00000487667 TMEM126AQ9H061 195 aa13.45□□□□□ -0.26
PHF1-209ENST00000487667 USP17L23D6RBM5 183 aa13.43□□□□□ -0.26
PHF1-209ENST00000487667 H0YGX0 51 aa13.42□□□□□ -0.26
PHF1-209ENST00000487667 TRACP01848 142 aa13.42□□□□□ -0.26
PHF1-209ENST00000487667 TEX49A0A1B0GTD5 131 aa13.4□□□□□ -0.26
PHF1-209ENST00000487667 XGP55808 180 aa13.4□□□□□ -0.26
PHF1-209ENST00000487667 SMIM11BQ8TCY0 68 aa13.4□□□□□ -0.26
PHF1-209ENST00000487667 TLX1NBP0CAT3 122 aa13.39□□□□□ -0.27
PHF1-209ENST00000487667 DYNC2H1Q8NCM8 4307 aaKnown RBP13.39□□□□□ -0.27
PHF1-209ENST00000487667 FAM240AA0A1B0GVK7 77 aa13.37□□□□□ -0.27
PHF1-209ENST00000487667 MT-ATP8P03928 68 aa13.37□□□□□ -0.27
PHF1-209ENST00000487667 C14orf177Q52M58 125 aa13.37□□□□□ -0.27
PHF1-209ENST00000487667 S100A7L2Q5SY68 101 aa13.37□□□□□ -0.27
PHF1-209ENST00000487667 PSCAO43653 123 aa13.37□□□□□ -0.27
PHF1-209ENST00000487667 NBDYA0A0U1RRE5 68 aa13.35□□□□□ -0.27
PHF1-209ENST00000487667 KRTAP1-5Q9BYS1 174 aa13.35□□□□□ -0.27
PHF1-209ENST00000487667 XAGE1AQ9HD64 81 aa13.34□□□□□ -0.27
PHF1-209ENST00000487667 NCR3O14931 201 aa13.33□□□□□ -0.28
PHF1-209ENST00000487667 CASC10Q5T4H9 136 aa13.33□□□□□ -0.28
PHF1-209ENST00000487667 PRR3P79522 188 aaKnown RBP13.33□□□□□ -0.28
PHF1-209ENST00000487667 A0A1B0GV72 72 aa13.32□□□□□ -0.28
PHF1-209ENST00000487667 A0A1B0GX51 115 aa13.31□□□□□ -0.28
PHF1-209ENST00000487667 SNCGO76070 127 aa13.31□□□□□ -0.28
PHF1-209ENST00000487667 IGLV6-57P01721 117 aa13.31□□□□□ -0.28
PHF1-209ENST00000487667 GAGE2EQ4V326 116 aa13.31□□□□□ -0.28
PHF1-209ENST00000487667 Q6ZRP5 223 aa13.31□□□□□ -0.28
PHF1-209ENST00000487667 GAGE2DQ9UEU5 116 aa13.31□□□□□ -0.28
PHF1-209ENST00000487667 DNAH7Q8WXX0 4024 aa13.3□□□□□ -0.28
PHF1-209ENST00000487667 WWC2-AS2Q96NR7 200 aa13.3□□□□□ -0.28
PHF1-209ENST00000487667 M0R378 163 aa13.29□□□□□ -0.28
PHF1-209ENST00000487667 VPREB1P12018 145 aa13.29□□□□□ -0.28
PHF1-209ENST00000487667 RPL18AQ02543 176 aaKnown RBP13.29□□□□□ -0.28
PHF1-209ENST00000487667 Q8NDZ9 215 aa13.29□□□□□ -0.28
PHF1-209ENST00000487667 ACYP1P07311 99 aa13.29□□□□□ -0.28
PHF1-209ENST00000487667 PLA2G2DQ9UNK4 145 aa13.29□□□□□ -0.28
PHF1-209ENST00000487667 SLPIP03973 132 aa13.28□□□□□ -0.28
PHF1-209ENST00000487667 CNBPP62633 177 aaKnown RBP13.28□□□□□ -0.28
PHF1-209ENST00000487667 LOC107984640A0A0U1RRK4 108 aa13.27□□□□□ -0.28
PHF1-209ENST00000487667 DNAL4O96015 105 aa13.27□□□□□ -0.28
PHF1-209ENST00000487667 CSMD3Q7Z407 3707 aa13.27□□□□□ -0.28
PHF1-209ENST00000487667 BAALC-AS2P0C853 105 aa13.27□□□□□ -0.29
PHF1-209ENST00000487667 Q6Q795 121 aa13.27□□□□□ -0.29
PHF1-209ENST00000487667 PKIGQ9Y2B9 76 aa13.27□□□□□ -0.29
PHF1-209ENST00000487667 TGP01266 2768 aa13.26□□□□□ -0.29
PHF1-209ENST00000487667 DNAH1Q9P2D7 4330 aa13.26□□□□□ -0.29
PHF1-209ENST00000487667 LECT2O14960 151 aa13.26□□□□□ -0.29
PHF1-209ENST00000487667 FAM218AQ96MZ4 157 aa13.26□□□□□ -0.29
PHF1-209ENST00000487667 C9orf129Q5T035 196 aaKnown RBP13.23□□□□□ -0.29
PHF1-209ENST00000487667 NKAPP1Q8N9T2 125 aa13.23□□□□□ -0.29
PHF1-209ENST00000487667 TRAV23DV6A0A075B6W5 121 aa13.22□□□□□ -0.29
PHF1-209ENST00000487667 TRBV10-3A0A0K0K1G6 114 aa13.22□□□□□ -0.29
PHF1-209ENST00000487667 C6orf99Q4VX62 202 aa13.22□□□□□ -0.29
PHF1-209ENST00000487667 STARD9Q9P2P6 4700 aa13.22□□□□□ -0.29
PHF1-209ENST00000487667 TRBV7-6A0A0J9YX20 115 aa13.21□□□□□ -0.29
PHF1-209ENST00000487667 INAFM2P0DMQ5 153 aa13.21□□□□□ -0.29
PHF1-209ENST00000487667 GAGE2BQ13066 116 aa13.21□□□□□ -0.29
PHF1-209ENST00000487667 PLECQ15149 4684 aaKnown RBP13.21□□□□□ -0.29
PHF1-209ENST00000487667 IGLV5-37A0A075B6J1 123 aa13.2□□□□□ -0.3
PHF1-209ENST00000487667 DIRC1Q969H9 104 aa13.2□□□□□ -0.3
PHF1-209ENST00000487667 C22orf24Q9Y442 160 aa13.19□□□□□ -0.3
PHF1-209ENST00000487667 A0A087WYN8 130 aa13.19□□□□□ -0.3
PHF1-209ENST00000487667 Q6ZRN7 208 aaPredicted RBP13.17□□□□□ -0.3
PHF1-209ENST00000487667 ZNF73O43830 326 aaPredicted RBP13.17□□□□□ -0.3
PHF1-209ENST00000487667 LRCOL1A6NCL2 159 aa13.16□□□□□ -0.3
PHF1-209ENST00000487667 Q8N814 137 aa13.15□□□□□ -0.3
PHF1-209ENST00000487667 LINC00167Q96N53 147 aa13.15□□□□□ -0.3
PHF1-209ENST00000487667 ORMDL1Q9P0S3 153 aa13.15□□□□□ -0.3
PHF1-209ENST00000487667 C16orf90A8MZG2 172 aa13.14□□□□□ -0.31
PHF1-209ENST00000487667 H3BQ85 93 aa13.14□□□□□ -0.31
PHF1-209ENST00000487667 LINC00575Q6W349 94 aa13.14□□□□□ -0.31
PHF1-209ENST00000487667 LYSTQ99698 3801 aa13.14□□□□□ -0.31
PHF1-209ENST00000487667 Q6ZR54 194 aa13.13□□□□□ -0.31
PHF1-209ENST00000487667 C3orf84H3BNL1 204 aa13.13□□□□□ -0.31
PHF1-209ENST00000487667 SDIM1Q6ZPB5 146 aa13.13□□□□□ -0.31
PHF1-209ENST00000487667 TENM2Q9NT68 2774 aa13.13□□□□□ -0.31
PHF1-209ENST00000487667 GHRHP01286 108 aa13.12□□□□□ -0.31
PHF1-209ENST00000487667 SERTAD4-AS1Q5TG53 156 aa13.12□□□□□ -0.31
PHF1-209ENST00000487667 OBSCN-AS1Q96MR7 158 aa13.12□□□□□ -0.31
PHF1-209ENST00000487667 TRBV7-7A0A0K0K1E9 115 aa13.11□□□□□ -0.31
PHF1-209ENST00000487667 hADV29S1A0JD25 119 aa13.11□□□□□ -0.31
PHF1-209ENST00000487667 COX7BP24311 80 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms