RNA–Protein interactions for RNA: ENST00000487621.5

SEMA3C-209, Transcript of semaphorin 3C, humanhuman

TSL 5

Gene SEMA3C, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-209ENST00000487621 PRLHP81277 87 aa14.5□□□□□ -0.09
SEMA3C-209ENST00000487621 FAM229BQ4G0N7 80 aa14.5□□□□□ -0.09
SEMA3C-209ENST00000487621 CHTOPQ9Y3Y2 248 aaKnown RBP14.5□□□□□ -0.09
SEMA3C-209ENST00000487621 TMEM223A0PJW6 202 aa14.48□□□□□ -0.09
SEMA3C-209ENST00000487621 TRAV12-1A0A0B4J245 112 aa14.47□□□□□ -0.09
SEMA3C-209ENST00000487621 NDUFA5Q16718 116 aa14.47□□□□□ -0.09
SEMA3C-209ENST00000487621 CHCHD1Q96BP2 118 aaKnown RBP14.47□□□□□ -0.09
SEMA3C-209ENST00000487621 FAM19A1Q7Z5A9 133 aa14.46□□□□□ -0.09
SEMA3C-209ENST00000487621 IFI27L1Q96BM0 104 aa14.44□□□□□ -0.1
SEMA3C-209ENST00000487621 LINC00158P58513 81 aa14.42□□□□□ -0.1
SEMA3C-209ENST00000487621 PLEKHB2Q96CS7 222 aa14.41□□□□□ -0.1
SEMA3C-209ENST00000487621 A0A0U1RRA0 63 aa14.39□□□□□ -0.11
SEMA3C-209ENST00000487621 LINC00304Q8N9R0 145 aa14.39□□□□□ -0.11
SEMA3C-209ENST00000487621 IGKV2D-26A0A0A0MRZ7 120 aa14.37□□□□□ -0.11
SEMA3C-209ENST00000487621 CBLN2Q8IUK8 224 aa14.37□□□□□ -0.11
SEMA3C-209ENST00000487621 SMIM13P0DJ93 91 aa14.36□□□□□ -0.11
SEMA3C-209ENST00000487621 FAM19A2Q8N3H0 131 aa14.36□□□□□ -0.11
SEMA3C-209ENST00000487621 C3orf22Q8N5N4 141 aa14.33□□□□□ -0.12
SEMA3C-209ENST00000487621 RETNLBQ9BQ08 111 aa14.33□□□□□ -0.12
SEMA3C-209ENST00000487621 HIGD2AQ9BW72 106 aa14.33□□□□□ -0.12
SEMA3C-209ENST00000487621 HSBP1O75506 76 aa14.32□□□□□ -0.12
SEMA3C-209ENST00000487621 CTAG1AP78358 180 aa14.32□□□□□ -0.12
SEMA3C-209ENST00000487621 MIR7-3HGQ8N6C7 128 aa14.32□□□□□ -0.12
SEMA3C-209ENST00000487621 HERV-K104P63124 156 aa14.31□□□□□ -0.12
SEMA3C-209ENST00000487621 SPRR1AP35321 89 aa14.3□□□□□ -0.12
SEMA3C-209ENST00000487621 LINC00310P59036 64 aa14.3□□□□□ -0.12
SEMA3C-209ENST00000487621 MEIG1Q5JSS6 88 aa14.3□□□□□ -0.12
SEMA3C-209ENST00000487621 BOD1L2Q8IYS8 172 aa14.3□□□□□ -0.12
SEMA3C-209ENST00000487621 SPRR4Q96PI1 79 aa14.3□□□□□ -0.12
SEMA3C-209ENST00000487621 PRYO14603 147 aa14.29□□□□□ -0.12
SEMA3C-209ENST00000487621 NDUFA12Q9UI09 145 aa14.29□□□□□ -0.12
SEMA3C-209ENST00000487621 TRGC2P03986 189 aa14.28□□□□□ -0.12
SEMA3C-209ENST00000487621 MUC17Q685J3 4493 aa14.28□□□□□ -0.12
SEMA3C-209ENST00000487621 KRTAP4-16G5E9R7 235 aaPredicted RBP14.27□□□□□ -0.13
SEMA3C-209ENST00000487621 NCR3O14931 201 aa14.27□□□□□ -0.13
SEMA3C-209ENST00000487621 ATP6V1G1O75348 118 aa14.27□□□□□ -0.13
SEMA3C-209ENST00000487621 TSPEAR-AS2P59090 65 aa14.27□□□□□ -0.13
SEMA3C-209ENST00000487621 KCNQ1DNQ9H478 68 aa14.27□□□□□ -0.13
SEMA3C-209ENST00000487621 LINC00337Q8N6G1 96 aa14.26□□□□□ -0.13
SEMA3C-209ENST00000487621 MYMXA0A1B0GTQ4 84 aa14.25□□□□□ -0.13
SEMA3C-209ENST00000487621 LINC00587B1AMM8 73 aa14.25□□□□□ -0.13
SEMA3C-209ENST00000487621 H0Y8G0 127 aa14.24□□□□□ -0.13
SEMA3C-209ENST00000487621 SERF1AO75920 110 aa14.24□□□□□ -0.13
SEMA3C-209ENST00000487621 LEPROTL1O95214 131 aa14.23□□□□□ -0.13
SEMA3C-209ENST00000487621 TPRXLQ17RH7 258 aa14.23□□□□□ -0.13
SEMA3C-209ENST00000487621 LOC107984156A0A0G2JMH3 177 aa14.22□□□□□ -0.13
SEMA3C-209ENST00000487621 TRBV10-3A0A0K0K1G6 114 aa14.22□□□□□ -0.13
SEMA3C-209ENST00000487621 ARL17AQ8IVW1 177 aa14.22□□□□□ -0.13
SEMA3C-209ENST00000487621 LEPROTO15243 131 aa14.21□□□□□ -0.13
SEMA3C-209ENST00000487621 ZNF706Q9Y5V0 76 aaPredicted RBP14.21□□□□□ -0.13
SEMA3C-209ENST00000487621 IGLV7-46A0A075B6I9 117 aa14.2□□□□□ -0.14
SEMA3C-209ENST00000487621 SMCR5Q8TEV8 140 aa14.2□□□□□ -0.14
SEMA3C-209ENST00000487621 MAP1LC3CQ9BXW4 147 aa14.2□□□□□ -0.14
SEMA3C-209ENST00000487621 FAT4Q6V0I7 4981 aa14.19□□□□□ -0.14
SEMA3C-209ENST00000487621 SPAG11AQ6PDA7 123 aa14.19□□□□□ -0.14
SEMA3C-209ENST00000487621 PLNP26678 52 aa14.18□□□□□ -0.14
SEMA3C-209ENST00000487621 DAND5Q8N907 189 aa14.17□□□□□ -0.14
SEMA3C-209ENST00000487621 ETDCA0A1B0GVM5 59 aa14.16□□□□□ -0.14
SEMA3C-209ENST00000487621 J3QQQ9 107 aa14.15□□□□□ -0.14
SEMA3C-209ENST00000487621 LINC00483Q53H64 154 aa14.15□□□□□ -0.14
SEMA3C-209ENST00000487621 B5MCH6 92 aa14.14□□□□□ -0.15
SEMA3C-209ENST00000487621 HSPB8Q9UJY1 196 aa14.14□□□□□ -0.15
SEMA3C-209ENST00000487621 TRBV10-2A0A0K0K1G8 114 aa14.13□□□□□ -0.15
SEMA3C-209ENST00000487621 A0A0U1RQV1 116 aa14.13□□□□□ -0.15
SEMA3C-209ENST00000487621 DPM2O94777 84 aa14.13□□□□□ -0.15
SEMA3C-209ENST00000487621 FABP4P15090 132 aa14.13□□□□□ -0.15
SEMA3C-209ENST00000487621 PMCHL2Q9BQD1 86 aa14.13□□□□□ -0.15
SEMA3C-209ENST00000487621 CDIP1Q9H305 208 aa14.13□□□□□ -0.15
SEMA3C-209ENST00000487621 PPDPFQ9H3Y8 114 aa14.13□□□□□ -0.15
SEMA3C-209ENST00000487621 COLCA2A8K830 154 aa14.12□□□□□ -0.15
SEMA3C-209ENST00000487621 Q8NBF4 154 aa14.12□□□□□ -0.15
SEMA3C-209ENST00000487621 NMUP48645 174 aa14.11□□□□□ -0.15
SEMA3C-209ENST00000487621 ERC2-IT1O76042 136 aa14.1□□□□□ -0.15
SEMA3C-209ENST00000487621 IGKCP01834 107 aa14.1□□□□□ -0.15
SEMA3C-209ENST00000487621 DDTP30046 118 aa14.1□□□□□ -0.15
SEMA3C-209ENST00000487621 HERVK_113P61574 105 aa14.1□□□□□ -0.15
SEMA3C-209ENST00000487621 SLC7A5P1Q8MH63 180 aa14.08□□□□□ -0.16
SEMA3C-209ENST00000487621 Q9BRP9 147 aa14.08□□□□□ -0.16
SEMA3C-209ENST00000487621 SPANXB1Q9NS25 103 aaPredicted RBP14.08□□□□□ -0.16
SEMA3C-209ENST00000487621 NDUFC2O95298 119 aa14.07□□□□□ -0.16
SEMA3C-209ENST00000487621 LGALS3P17931 250 aaKnown RBP14.07□□□□□ -0.16
SEMA3C-209ENST00000487621 S100A12P80511 92 aa14.07□□□□□ -0.16
SEMA3C-209ENST00000487621 C4orf48Q5BLP8 95 aa14.07□□□□□ -0.16
SEMA3C-209ENST00000487621 IGLV6-57P01721 117 aa14.06□□□□□ -0.16
SEMA3C-209ENST00000487621 GAGE2AQ6NT46 116 aa14.06□□□□□ -0.16
SEMA3C-209ENST00000487621 FP248Q71RG6 208 aaPredicted RBP14.06□□□□□ -0.16
SEMA3C-209ENST00000487621 EIF4EBP3O60516 100 aaPredicted RBP14.05□□□□□ -0.16
SEMA3C-209ENST00000487621 LCE2AQ5TA79 106 aaPredicted RBP14.05□□□□□ -0.16
SEMA3C-209ENST00000487621 SOSTDC1Q6X4U4 206 aa14.05□□□□□ -0.16
SEMA3C-209ENST00000487621 Q6ZRX8 168 aa14.04□□□□□ -0.16
SEMA3C-209ENST00000487621 SPINK1P00995 79 aa14.03□□□□□ -0.16
SEMA3C-209ENST00000487621 ADAMTSL4-AS1Q5T5F5 129 aa14.03□□□□□ -0.16
SEMA3C-209ENST00000487621 MIEN1Q9BRT3 115 aa14.03□□□□□ -0.16
SEMA3C-209ENST00000487621 A0A0J9YXY3 114 aa14.01□□□□□ -0.17
SEMA3C-209ENST00000487621 E9PLD3 99 aa14.01□□□□□ -0.17
SEMA3C-209ENST00000487621 MOBPQ13875 183 aa13.99□□□□□ -0.17
SEMA3C-209ENST00000487621 KRTAP13-3Q3SY46 172 aa13.99□□□□□ -0.17
SEMA3C-209ENST00000487621 S100A7L2Q5SY68 101 aa13.99□□□□□ -0.17
SEMA3C-209ENST00000487621 SSBP3-AS1Q7Z2R9 100 aa13.98□□□□□ -0.17
SEMA3C-209ENST00000487621 TRAV23DV6A0A075B6W5 121 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms