RNA–Protein interactions for RNA: ENST00000487241.1

TRIM5-210, Transcript of tripartite motif containing 5, human

TSL 1 (best)

Gene TRIM5, Length 756 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM5-210	ENST00000487241	KRTAP26-1	Q6PEX3	210 aa		5.09	□□□□□ -1.59
TRIM5-210	ENST00000487241	SCGB1D4	Q6XE38	83 aa		5.09	□□□□□ -1.59
TRIM5-210	ENST00000487241	CDC42SE2	Q9NRR3	84 aa		5.09	□□□□□ -1.59
TRIM5-210	ENST00000487241	SPANXB1	Q9NS25	103 aa	Predicted RBP	5.09	□□□□□ -1.59
TRIM5-210	ENST00000487241	IGHV1-58	A0A0C4DH39	117 aa		5.08	□□□□□ -1.6
TRIM5-210	ENST00000487241		H7C423	109 aa		5.08	□□□□□ -1.6
TRIM5-210	ENST00000487241	OXT	P01178	125 aa		5.08	□□□□□ -1.6
TRIM5-210	ENST00000487241	SPINK8	P0C7L1	97 aa		5.08	□□□□□ -1.6
TRIM5-210	ENST00000487241	SMIM13	P0DJ93	91 aa		5.08	□□□□□ -1.6
TRIM5-210	ENST00000487241	COX6A2	Q02221	97 aa		5.08	□□□□□ -1.6
TRIM5-210	ENST00000487241	SMAGP	Q0VAQ4	97 aa		5.08	□□□□□ -1.6
TRIM5-210	ENST00000487241	VAMP3	Q15836	100 aa		5.08	□□□□□ -1.6
TRIM5-210	ENST00000487241	LCE1D	Q5T752	114 aa		5.08	□□□□□ -1.6
TRIM5-210	ENST00000487241	C9orf163	Q8N9P6	203 aa		5.08	□□□□□ -1.6
TRIM5-210	ENST00000487241	RAB37	Q96AX2	223 aa		5.08	□□□□□ -1.6
TRIM5-210	ENST00000487241	NAA38	Q9BRA0	125 aa	Known RBP	5.08	□□□□□ -1.6
TRIM5-210	ENST00000487241	NHP2	Q9NX24	153 aa	Known RBP	5.08	□□□□□ -1.6
TRIM5-210	ENST00000487241		H3BUT2	72 aa		5.07	□□□□□ -1.6
TRIM5-210	ENST00000487241	LINC00242	Q5T6M2	205 aa		5.07	□□□□□ -1.6
TRIM5-210	ENST00000487241	AMMECR1L	Q6DCA0	310 aa		5.07	□□□□□ -1.6
TRIM5-210	ENST00000487241	KRTAP9-3	Q9BYQ3	159 aa		5.07	□□□□□ -1.6
TRIM5-210	ENST00000487241	GEMIN7	Q9H840	131 aa	Known RBP	5.07	□□□□□ -1.6
TRIM5-210	ENST00000487241	CDKN2A-AS1	Q9UH64	79 aa		5.07	□□□□□ -1.6
TRIM5-210	ENST00000487241	IGKV3OR2-268	A0A0C4DH90	116 aa		5.06	□□□□□ -1.6
TRIM5-210	ENST00000487241	IGLV5-39	A0A0G2JS06	123 aa		5.06	□□□□□ -1.6
TRIM5-210	ENST00000487241		A0A0J9YXY3	114 aa		5.06	□□□□□ -1.6
TRIM5-210	ENST00000487241		A0A1W2PPM0	123 aa		5.06	□□□□□ -1.6
TRIM5-210	ENST00000487241	HERVK_113	P63121	156 aa		5.06	□□□□□ -1.6
TRIM5-210	ENST00000487241	TMEM101	Q96IK0	257 aa		5.06	□□□□□ -1.6
TRIM5-210	ENST00000487241	LITAF	Q99732	161 aa		5.06	□□□□□ -1.6
TRIM5-210	ENST00000487241	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	5.05	□□□□□ -1.6
TRIM5-210	ENST00000487241	TRAV13-1	A0A0B4J241	112 aa		5.05	□□□□□ -1.6
TRIM5-210	ENST00000487241		K7EP34	96 aa		5.05	□□□□□ -1.6
TRIM5-210	ENST00000487241	RPL37A	P61513	92 aa	Known RBP	5.05	□□□□□ -1.6
TRIM5-210	ENST00000487241	CNBP	P62633	177 aa	Known RBP	5.05	□□□□□ -1.6
TRIM5-210	ENST00000487241	SRSF9	Q13242	221 aa	Known RBP eCLIP	5.05	□□□□□ -1.6
TRIM5-210	ENST00000487241	NDUFA12	Q9UI09	145 aa		5.05	□□□□□ -1.6
TRIM5-210	ENST00000487241	SMIM1	B2RUZ4	78 aa		5.04	□□□□□ -1.6
TRIM5-210	ENST00000487241	KRTAP10-4	P60372	401 aa	Predicted RBP	5.04	□□□□□ -1.6
TRIM5-210	ENST00000487241	CFAP161	Q6P656	301 aa		5.04	□□□□□ -1.6
TRIM5-210	ENST00000487241	SDIM1	Q6ZPB5	146 aa		5.04	□□□□□ -1.6
TRIM5-210	ENST00000487241	GAGE10	A6NGK3	116 aa		5.03	□□□□□ -1.6
TRIM5-210	ENST00000487241	TMEM238	C9JI98	176 aa		5.03	□□□□□ -1.6
TRIM5-210	ENST00000487241	PANO1	I0J062	215 aa		5.03	□□□□□ -1.6
TRIM5-210	ENST00000487241	NDUFA1	O15239	70 aa		5.03	□□□□□ -1.6
TRIM5-210	ENST00000487241	SLPI	P03973	132 aa		5.03	□□□□□ -1.6
TRIM5-210	ENST00000487241	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	5.03	□□□□□ -1.6
TRIM5-210	ENST00000487241	DPH3	Q96FX2	82 aa		5.03	□□□□□ -1.6
TRIM5-210	ENST00000487241	SPANXD	Q9BXN6	97 aa		5.03	□□□□□ -1.6
TRIM5-210	ENST00000487241	SPANXC	Q9NY87	97 aa		5.03	□□□□□ -1.6
TRIM5-210	ENST00000487241	TIMM17B	O60830	172 aa		5.02	□□□□□ -1.61
TRIM5-210	ENST00000487241	CFC1B	P0CG36	223 aa		5.02	□□□□□ -1.61
TRIM5-210	ENST00000487241	CFC1	P0CG37	223 aa		5.02	□□□□□ -1.61
TRIM5-210	ENST00000487241	FABP2	P12104	132 aa		5.02	□□□□□ -1.61
TRIM5-210	ENST00000487241	HIGD2B	Q4VC39	106 aa		5.02	□□□□□ -1.61
TRIM5-210	ENST00000487241	ADAMTSL4-AS1	Q5T5F5	129 aa		5.02	□□□□□ -1.61
TRIM5-210	ENST00000487241	MUSTN1	Q8IVN3	82 aa		5.02	□□□□□ -1.61
TRIM5-210	ENST00000487241	C15orf56	Q8N910	161 aa		5.02	□□□□□ -1.61
TRIM5-210	ENST00000487241	SPCS1	Q9Y6A9	102 aa		5.02	□□□□□ -1.61
TRIM5-210	ENST00000487241	LINC00959	A0A1B0GUT2	108 aa		5.01	□□□□□ -1.61
TRIM5-210	ENST00000487241		A4D1N5	150 aa		5.01	□□□□□ -1.61
TRIM5-210	ENST00000487241	APOM	O95445	188 aa		5.01	□□□□□ -1.61
TRIM5-210	ENST00000487241	TSPAN13	O95857	204 aa		5.01	□□□□□ -1.61
TRIM5-210	ENST00000487241	CHTF8	P0CG12	524 aa		5.01	□□□□□ -1.61
TRIM5-210	ENST00000487241	CIRBP	Q14011	172 aa	Known RBP	5.01	□□□□□ -1.61
TRIM5-210	ENST00000487241	GTF2H5	Q6ZYL4	71 aa		5.01	□□□□□ -1.61
TRIM5-210	ENST00000487241	ZNF625	Q96I27	306 aa	Predicted RBP	5.01	□□□□□ -1.61
TRIM5-210	ENST00000487241		A0A087WYN8	130 aa		5	□□□□□ -1.61
TRIM5-210	ENST00000487241	GVQW2	A0A096LPI5	108 aa	Predicted RBP	5	□□□□□ -1.61
TRIM5-210	ENST00000487241	IGHV3OR16-9	A0A0B4J2B5	98 aa		5	□□□□□ -1.61
TRIM5-210	ENST00000487241		A0A0B4J2C4	111 aa		5	□□□□□ -1.61
TRIM5-210	ENST00000487241	XCL1	P47992	114 aa		5	□□□□□ -1.61
TRIM5-210	ENST00000487241	SS18	Q15532	418 aa		5	□□□□□ -1.61
TRIM5-210	ENST00000487241	SPACA4	Q8TDM5	124 aa		5	□□□□□ -1.61
TRIM5-210	ENST00000487241		A0A087WZ39	114 aa		4.99	□□□□□ -1.61
TRIM5-210	ENST00000487241	RPL24	P83731	157 aa	Known RBP	4.99	□□□□□ -1.61
TRIM5-210	ENST00000487241	IGKV2-24	A0A0C4DH68	120 aa		4.98	□□□□□ -1.61
TRIM5-210	ENST00000487241	IFITM1	P13164	125 aa		4.98	□□□□□ -1.61
TRIM5-210	ENST00000487241	HERV-K104	P63124	156 aa		4.98	□□□□□ -1.61
TRIM5-210	ENST00000487241	DAND5	Q8N907	189 aa		4.98	□□□□□ -1.61
TRIM5-210	ENST00000487241	COX7B2	Q8TF08	81 aa		4.98	□□□□□ -1.61
TRIM5-210	ENST00000487241	PRO1854	Q9UHT4	67 aa		4.98	□□□□□ -1.61
TRIM5-210	ENST00000487241	LRP1	Q07954	4544 aa	Known RBP	4.98	□□□□□ -1.61
TRIM5-210	ENST00000487241	NPC2	P61916	151 aa		4.97	□□□□□ -1.61
TRIM5-210	ENST00000487241	CD164L2	Q6UWJ8	174 aa		4.97	□□□□□ -1.61
TRIM5-210	ENST00000487241	SOSTDC1	Q6X4U4	206 aa		4.97	□□□□□ -1.61
TRIM5-210	ENST00000487241	C5orf38	Q86SI9	138 aa		4.97	□□□□□ -1.61
TRIM5-210	ENST00000487241	LINC01561	Q8N1V8	128 aa		4.97	□□□□□ -1.61
TRIM5-210	ENST00000487241	C7orf33	Q8WU49	177 aa		4.97	□□□□□ -1.61
TRIM5-210	ENST00000487241	LINC00526	Q96FQ7	95 aa		4.97	□□□□□ -1.61
TRIM5-210	ENST00000487241	KRTAP4-7	Q9BYR0	210 aa		4.97	□□□□□ -1.61
TRIM5-210	ENST00000487241	PLAC8	Q9NZF1	115 aa		4.97	□□□□□ -1.61
TRIM5-210	ENST00000487241	PKIG	Q9Y2B9	76 aa		4.97	□□□□□ -1.61
TRIM5-210	ENST00000487241	LRP2	P98164	4655 aa		4.96	□□□□□ -1.62
TRIM5-210	ENST00000487241		A0A096LNI7	61 aa		4.96	□□□□□ -1.62
TRIM5-210	ENST00000487241	PRSS2	P07478	247 aa		4.96	□□□□□ -1.62
TRIM5-210	ENST00000487241	MEIG1	Q5JSS6	88 aa		4.96	□□□□□ -1.62
TRIM5-210	ENST00000487241		Q6ZRU5	148 aa		4.96	□□□□□ -1.62
TRIM5-210	ENST00000487241	LINC00308	Q8TCZ7	52 aa		4.96	□□□□□ -1.62
TRIM5-210	ENST00000487241	CARD19	Q96LW7	228 aa		4.96	□□□□□ -1.62

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