RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 HIST1H2BOP23527 126 aa3.9□□□□□ -1.79
RTFDC1-209ENST00000487211 HIST1H2BBP33778 126 aa3.9□□□□□ -1.79
RTFDC1-209ENST00000487211 HIST1H2BDP58876 126 aa3.9□□□□□ -1.79
RTFDC1-209ENST00000487211 HIST1H2BCP62807 126 aa3.9□□□□□ -1.79
RTFDC1-209ENST00000487211 KIAA0087Q14695 138 aa3.9□□□□□ -1.79
RTFDC1-209ENST00000487211 PMVKQ15126 192 aa3.9□□□□□ -1.79
RTFDC1-209ENST00000487211 HIST2H2BEQ16778 126 aa3.9□□□□□ -1.79
RTFDC1-209ENST00000487211 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.9□□□□□ -1.79
RTFDC1-209ENST00000487211 Q6ZSA8 131 aa3.9□□□□□ -1.79
RTFDC1-209ENST00000487211 HIST1H2BHQ93079 126 aa3.9□□□□□ -1.79
RTFDC1-209ENST00000487211 HIST1H2BNQ99877 126 aa3.9□□□□□ -1.79
RTFDC1-209ENST00000487211 HIST1H2BMQ99879 126 aa3.9□□□□□ -1.79
RTFDC1-209ENST00000487211 C2orf88Q9BSF0 95 aa3.9□□□□□ -1.79
RTFDC1-209ENST00000487211 CDKN2A-AS1Q9UH64 79 aa3.9□□□□□ -1.79
RTFDC1-209ENST00000487211 TINCRA0A1B0GVN0 87 aa3.89□□□□□ -1.79
RTFDC1-209ENST00000487211 NDUFA6P56556 154 aa3.89□□□□□ -1.79
RTFDC1-209ENST00000487211 HERVK_113P63121 156 aa3.89□□□□□ -1.79
RTFDC1-209ENST00000487211 Q6ZRU5 148 aa3.89□□□□□ -1.79
RTFDC1-209ENST00000487211 HSBP1O75506 76 aa3.88□□□□□ -1.79
RTFDC1-209ENST00000487211 ATP5LO75964 103 aa3.88□□□□□ -1.79
RTFDC1-209ENST00000487211 APOMO95445 188 aa3.88□□□□□ -1.79
RTFDC1-209ENST00000487211 SMR3BP02814 79 aaPredicted RBP3.88□□□□□ -1.79
RTFDC1-209ENST00000487211 FABP4P15090 132 aa3.88□□□□□ -1.79
RTFDC1-209ENST00000487211 SEC11AP67812 179 aa3.88□□□□□ -1.79
RTFDC1-209ENST00000487211 SYCNQ0VAF6 134 aa3.88□□□□□ -1.79
RTFDC1-209ENST00000487211 UNQ6190/PRO20217Q6UXQ8 127 aa3.88□□□□□ -1.79
RTFDC1-209ENST00000487211 OR10D4PQ8NGN7 298 aa3.88□□□□□ -1.79
RTFDC1-209ENST00000487211 ORAOV1Q8WV07 137 aa3.88□□□□□ -1.79
RTFDC1-209ENST00000487211 IFI27L1Q96BM0 104 aa3.88□□□□□ -1.79
RTFDC1-209ENST00000487211 GEMIN7Q9H840 131 aaKnown RBP3.88□□□□□ -1.79
RTFDC1-209ENST00000487211 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.87□□□□□ -1.79
RTFDC1-209ENST00000487211 CHTF8P0CG12 524 aa3.87□□□□□ -1.79
RTFDC1-209ENST00000487211 IGLC3P0DOY3 106 aa3.87□□□□□ -1.79
RTFDC1-209ENST00000487211 SPAG11BQ08648 103 aa3.87□□□□□ -1.79
RTFDC1-209ENST00000487211 CIRBPQ14011 172 aaKnown RBP3.87□□□□□ -1.79
RTFDC1-209ENST00000487211 MAJINQ3KP22 176 aa3.87□□□□□ -1.79
RTFDC1-209ENST00000487211 C2orf82Q6UX34 121 aa3.87□□□□□ -1.79
RTFDC1-209ENST00000487211 LINC00469Q8N7U9 141 aa3.87□□□□□ -1.79
RTFDC1-209ENST00000487211 CIRBP-AS1Q8TBR5 109 aa3.87□□□□□ -1.79
RTFDC1-209ENST00000487211 CARD19Q96LW7 228 aa3.87□□□□□ -1.79
RTFDC1-209ENST00000487211 CAMK2N2Q96S95 79 aa3.87□□□□□ -1.79
RTFDC1-209ENST00000487211 CHAC1Q9BUX1 264 aa3.87□□□□□ -1.79
RTFDC1-209ENST00000487211 TRAV12-1A0A0B4J245 112 aa3.86□□□□□ -1.79
RTFDC1-209ENST00000487211 C11orf86A6NJI1 115 aa3.86□□□□□ -1.79
RTFDC1-209ENST00000487211 LEPROTL1O95214 131 aa3.86□□□□□ -1.79
RTFDC1-209ENST00000487211 SPINK8P0C7L1 97 aa3.86□□□□□ -1.79
RTFDC1-209ENST00000487211 ZNF22P17026 224 aaPredicted RBP3.86□□□□□ -1.79
RTFDC1-209ENST00000487211 COA6Q5JTJ3 125 aaKnown RBP3.86□□□□□ -1.79
RTFDC1-209ENST00000487211 C9orf129Q5T035 196 aaKnown RBP3.86□□□□□ -1.79
RTFDC1-209ENST00000487211 SCXQ7RTU7 201 aa3.86□□□□□ -1.79
RTFDC1-209ENST00000487211 MRPL35Q9NZE8 188 aaKnown RBP3.86□□□□□ -1.79
RTFDC1-209ENST00000487211 TOMM7Q9P0U1 55 aa3.86□□□□□ -1.79
RTFDC1-209ENST00000487211 C6orf48Q9UBA6 75 aa3.86□□□□□ -1.79
RTFDC1-209ENST00000487211 CHTOPQ9Y3Y2 248 aaKnown RBP3.86□□□□□ -1.79
RTFDC1-209ENST00000487211 A0A096LNI7 61 aa3.85□□□□□ -1.79
RTFDC1-209ENST00000487211 A0A1B0GWB2 263 aa3.85□□□□□ -1.79
RTFDC1-209ENST00000487211 C9orf116Q5BN46 136 aaPredicted RBP3.85□□□□□ -1.79
RTFDC1-209ENST00000487211 C6orf226Q5I0X4 101 aa3.85□□□□□ -1.79
RTFDC1-209ENST00000487211 Q8IZM0 81 aa3.85□□□□□ -1.79
RTFDC1-209ENST00000487211 DPH3Q96FX2 82 aa3.85□□□□□ -1.79
RTFDC1-209ENST00000487211 PACRGQ96M98 296 aaPredicted RBP3.85□□□□□ -1.79
RTFDC1-209ENST00000487211 IGKV2-24A0A0C4DH68 120 aa3.84□□□□□ -1.79
RTFDC1-209ENST00000487211 F8VRH5 84 aa3.84□□□□□ -1.79
RTFDC1-209ENST00000487211 H0Y8G0 127 aa3.84□□□□□ -1.79
RTFDC1-209ENST00000487211 NDUFA1O15239 70 aa3.84□□□□□ -1.79
RTFDC1-209ENST00000487211 TMEM170BQ5T4T1 132 aa3.84□□□□□ -1.79
RTFDC1-209ENST00000487211 LCE3CQ5T5A8 94 aa3.84□□□□□ -1.79
RTFDC1-209ENST00000487211 CEND1Q8N111 149 aa3.84□□□□□ -1.79
RTFDC1-209ENST00000487211 SPACA4Q8TDM5 124 aa3.84□□□□□ -1.79
RTFDC1-209ENST00000487211 COX7B2Q8TF08 81 aa3.84□□□□□ -1.79
RTFDC1-209ENST00000487211 PMCHL2Q9BQD1 86 aa3.84□□□□□ -1.79
RTFDC1-209ENST00000487211 HSPB8Q9UJY1 196 aa3.84□□□□□ -1.79
RTFDC1-209ENST00000487211 LOC107984640A0A0U1RRK4 108 aa3.83□□□□□ -1.8
RTFDC1-209ENST00000487211 A0A1W2PNN7 141 aa3.83□□□□□ -1.8
RTFDC1-209ENST00000487211 TMEM223A0PJW6 202 aa3.83□□□□□ -1.8
RTFDC1-209ENST00000487211 H3BRM9 83 aa3.83□□□□□ -1.8
RTFDC1-209ENST00000487211 KRTAP10-7P60409 375 aaPredicted RBP3.83□□□□□ -1.8
RTFDC1-209ENST00000487211 CKS1BP61024 79 aa3.83□□□□□ -1.8
RTFDC1-209ENST00000487211 PLAC8Q9NZF1 115 aa3.83□□□□□ -1.8
RTFDC1-209ENST00000487211 TRBV30A0A0K0K1B3 111 aa3.82□□□□□ -1.8
RTFDC1-209ENST00000487211 SYS1-DBNDD2H3BUS1 97 aa3.82□□□□□ -1.8
RTFDC1-209ENST00000487211 TLX1NBP0CAT3 122 aa3.82□□□□□ -1.8
RTFDC1-209ENST00000487211 MAP1LC3CQ9BXW4 147 aa3.82□□□□□ -1.8
RTFDC1-209ENST00000487211 NDUFC2-KCTD14E9PQ53 114 aa3.81□□□□□ -1.8
RTFDC1-209ENST00000487211 C3orf79P0CE67 100 aa3.81□□□□□ -1.8
RTFDC1-209ENST00000487211 KRTAP10-4P60372 401 aaPredicted RBP3.81□□□□□ -1.8
RTFDC1-209ENST00000487211 RPL18AQ02543 176 aaKnown RBP3.81□□□□□ -1.8
RTFDC1-209ENST00000487211 Q5VSD8 79 aa3.81□□□□□ -1.8
RTFDC1-209ENST00000487211 LINC00474Q9P2X8 69 aa3.81□□□□□ -1.8
RTFDC1-209ENST00000487211 DPM2O94777 84 aa3.8□□□□□ -1.8
RTFDC1-209ENST00000487211 IGKCP01834 107 aa3.8□□□□□ -1.8
RTFDC1-209ENST00000487211 CXCL5P42830 114 aa3.8□□□□□ -1.8
RTFDC1-209ENST00000487211 LINC01545Q5VT33 79 aa3.8□□□□□ -1.8
RTFDC1-209ENST00000487211 HIST3H2BBQ8N257 126 aa3.8□□□□□ -1.8
RTFDC1-209ENST00000487211 ZNF625Q96I27 306 aaPredicted RBP3.8□□□□□ -1.8
RTFDC1-209ENST00000487211 INAFM2P0DMQ5 153 aa3.79□□□□□ -1.8
RTFDC1-209ENST00000487211 PLNP26678 52 aa3.79□□□□□ -1.8
RTFDC1-209ENST00000487211 PFN2P35080 140 aa3.79□□□□□ -1.8
RTFDC1-209ENST00000487211 RPL13AP40429 203 aaKnown RBP3.79□□□□□ -1.8
RTFDC1-209ENST00000487211 HNRNPA3P51991 378 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms