RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 S100PP25815 95 aa11.41□□□□□ -0.58
PHF1-208ENST00000486845 HIGD2AQ9BW72 106 aa11.41□□□□□ -0.58
PHF1-208ENST00000486845 ERG28Q9UKR5 140 aa11.41□□□□□ -0.58
PHF1-208ENST00000486845 C4orf48Q5BLP8 95 aa11.4□□□□□ -0.58
PHF1-208ENST00000486845 IGLV5-39A0A0G2JS06 123 aa11.39□□□□□ -0.59
PHF1-208ENST00000486845 LINC01546A6NGU7 62 aa11.39□□□□□ -0.59
PHF1-208ENST00000486845 LINC01547P58512 204 aaPredicted RBP11.39□□□□□ -0.59
PHF1-208ENST00000486845 COX17Q14061 63 aa11.39□□□□□ -0.59
PHF1-208ENST00000486845 ASB16-AS1Q495Z4 193 aa11.38□□□□□ -0.59
PHF1-208ENST00000486845 SPRR4Q96PI1 79 aa11.38□□□□□ -0.59
PHF1-208ENST00000486845 SMCO4Q9NRQ5 59 aa11.38□□□□□ -0.59
PHF1-208ENST00000486845 KRTAP13-3Q3SY46 172 aa11.37□□□□□ -0.59
PHF1-208ENST00000486845 TRAV9-1A0A075B6T8 112 aa11.36□□□□□ -0.59
PHF1-208ENST00000486845 IGLC3P0DOY3 106 aa11.36□□□□□ -0.59
PHF1-208ENST00000486845 ZNF706Q9Y5V0 76 aaPredicted RBP11.36□□□□□ -0.59
PHF1-208ENST00000486845 Q8NDZ9 215 aa11.35□□□□□ -0.59
PHF1-208ENST00000486845 YPEL4Q96NS1 127 aa11.35□□□□□ -0.59
PHF1-208ENST00000486845 LCE2DQ5TA82 110 aaPredicted RBP11.34□□□□□ -0.59
PHF1-208ENST00000486845 FA2HQ7L5A8 372 aa11.33□□□□□ -0.6
PHF1-208ENST00000486845 ZNF625Q96I27 306 aaPredicted RBP11.33□□□□□ -0.6
PHF1-208ENST00000486845 ZNF22P17026 224 aaPredicted RBP11.32□□□□□ -0.6
PHF1-208ENST00000486845 SEC61BP60468 96 aaKnown RBP11.32□□□□□ -0.6
PHF1-208ENST00000486845 SFTA2Q6UW10 78 aa11.32□□□□□ -0.6
PHF1-208ENST00000486845 Q8NBF4 154 aa11.32□□□□□ -0.6
PHF1-208ENST00000486845 DAND5Q8N907 189 aa11.31□□□□□ -0.6
PHF1-208ENST00000486845 NDUFA6P56556 154 aa11.3□□□□□ -0.6
PHF1-208ENST00000486845 SPINK1P00995 79 aa11.29□□□□□ -0.6
PHF1-208ENST00000486845 COLCA2A8K830 154 aa11.28□□□□□ -0.6
PHF1-208ENST00000486845 KRTAP4-1Q9BYQ7 146 aa11.28□□□□□ -0.6
PHF1-208ENST00000486845 COX19Q49B96 90 aa11.27□□□□□ -0.61
PHF1-208ENST00000486845 NDUFA12Q9UI09 145 aa11.26□□□□□ -0.61
PHF1-208ENST00000486845 PRYO14603 147 aa11.25□□□□□ -0.61
PHF1-208ENST00000486845 LINC00158P58513 81 aa11.25□□□□□ -0.61
PHF1-208ENST00000486845 TRAPPC1Q9Y5R8 145 aa11.24□□□□□ -0.61
PHF1-208ENST00000486845 FABP9Q0Z7S8 132 aa11.23□□□□□ -0.61
PHF1-208ENST00000486845 TMEM170BQ5T4T1 132 aa11.23□□□□□ -0.61
PHF1-208ENST00000486845 CRCT1Q9UGL9 99 aa11.23□□□□□ -0.61
PHF1-208ENST00000486845 C11orf86A6NJI1 115 aa11.22□□□□□ -0.61
PHF1-208ENST00000486845 FAM19A2Q8N3H0 131 aa11.22□□□□□ -0.61
PHF1-208ENST00000486845 SMCR5Q8TEV8 140 aa11.22□□□□□ -0.61
PHF1-208ENST00000486845 A0A096LNJ9 63 aa11.21□□□□□ -0.61
PHF1-208ENST00000486845 A0A0U1RRA0 63 aa11.2□□□□□ -0.62
PHF1-208ENST00000486845 ETDCA0A1B0GVM5 59 aa11.2□□□□□ -0.62
PHF1-208ENST00000486845 SPRR1AP35321 89 aa11.2□□□□□ -0.62
PHF1-208ENST00000486845 LINC00483Q53H64 154 aa11.2□□□□□ -0.62
PHF1-208ENST00000486845 FSIP2Q5CZC0 6907 aa11.2□□□□□ -0.62
PHF1-208ENST00000486845 HBDP02042 147 aa11.19□□□□□ -0.62
PHF1-208ENST00000486845 RPS29P62273 56 aaKnown RBP11.19□□□□□ -0.62
PHF1-208ENST00000486845 KCNQ1DNQ9H478 68 aa11.19□□□□□ -0.62
PHF1-208ENST00000486845 TRGC2P03986 189 aa11.18□□□□□ -0.62
PHF1-208ENST00000486845 BAGE3Q86Y29 109 aa11.18□□□□□ -0.62
PHF1-208ENST00000486845 BOD1L2Q8IYS8 172 aa11.18□□□□□ -0.62
PHF1-208ENST00000486845 KRTAP4-16G5E9R7 235 aaPredicted RBP11.17□□□□□ -0.62
PHF1-208ENST00000486845 Q8N377 158 aa11.17□□□□□ -0.62
PHF1-208ENST00000486845 NCR3O14931 201 aa11.16□□□□□ -0.62
PHF1-208ENST00000486845 MOBPQ13875 183 aa11.16□□□□□ -0.62
PHF1-208ENST00000486845 GAGE2AQ6NT46 116 aa11.16□□□□□ -0.62
PHF1-208ENST00000486845 SLC25A20O43772 301 aa11.15□□□□□ -0.62
PHF1-208ENST00000486845 LINC00614P0C842 121 aa11.15□□□□□ -0.62
PHF1-208ENST00000486845 XP32Q5T750 250 aa11.15□□□□□ -0.62
PHF1-208ENST00000486845 SSBP3-AS1Q7Z2R9 100 aa11.15□□□□□ -0.62
PHF1-208ENST00000486845 IGLV9-49A0A0B4J1Y8 123 aa11.14□□□□□ -0.63
PHF1-208ENST00000486845 SMIM13P0DJ93 91 aa11.14□□□□□ -0.63
PHF1-208ENST00000486845 URB1-AS1Q96HZ7 61 aa11.14□□□□□ -0.63
PHF1-208ENST00000486845 S100A12P80511 92 aa11.13□□□□□ -0.63
PHF1-208ENST00000486845 PMCHL1Q16048 86 aa11.13□□□□□ -0.63
PHF1-208ENST00000486845 CHTOPQ9Y3Y2 248 aaKnown RBP11.13□□□□□ -0.63
PHF1-208ENST00000486845 TRBV10-3A0A0K0K1G6 114 aa11.12□□□□□ -0.63
PHF1-208ENST00000486845 MEIG1Q5JSS6 88 aa11.12□□□□□ -0.63
PHF1-208ENST00000486845 C18orf32Q8TCD1 76 aa11.12□□□□□ -0.63
PHF1-208ENST00000486845 TMEM223A0PJW6 202 aa11.11□□□□□ -0.63
PHF1-208ENST00000486845 MIR7-3HGQ8N6C7 128 aa11.11□□□□□ -0.63
PHF1-208ENST00000486845 B5MCH6 92 aa11.09□□□□□ -0.63
PHF1-208ENST00000486845 HERV-K104P63124 156 aa11.09□□□□□ -0.63
PHF1-208ENST00000486845 LCE2CQ5TA81 110 aa11.09□□□□□ -0.63
PHF1-208ENST00000486845 LINC00587B1AMM8 73 aa11.07□□□□□ -0.64
PHF1-208ENST00000486845 ERC2-IT1O76042 136 aa11.07□□□□□ -0.64
PHF1-208ENST00000486845 MAP1LC3CQ9BXW4 147 aa11.05□□□□□ -0.64
PHF1-208ENST00000486845 TRAV12-1A0A0B4J245 112 aa11.04□□□□□ -0.64
PHF1-208ENST00000486845 HIST1H2BKO60814 126 aa11.03□□□□□ -0.64
PHF1-208ENST00000486845 HIST1H2BJP06899 126 aa11.03□□□□□ -0.64
PHF1-208ENST00000486845 HIST1H2BOP23527 126 aa11.03□□□□□ -0.64
PHF1-208ENST00000486845 HIST1H2BBP33778 126 aa11.03□□□□□ -0.64
PHF1-208ENST00000486845 HIST1H2BDP58876 126 aa11.03□□□□□ -0.64
PHF1-208ENST00000486845 HIST1H2BCP62807 126 aa11.03□□□□□ -0.64
PHF1-208ENST00000486845 HIST2H2BEQ16778 126 aa11.03□□□□□ -0.64
PHF1-208ENST00000486845 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.03□□□□□ -0.64
PHF1-208ENST00000486845 HIST1H2BHQ93079 126 aa11.03□□□□□ -0.64
PHF1-208ENST00000486845 HIST1H2BNQ99877 126 aa11.03□□□□□ -0.64
PHF1-208ENST00000486845 HIST1H2BMQ99879 126 aa11.03□□□□□ -0.64
PHF1-208ENST00000486845 Q9BRP9 147 aa11.03□□□□□ -0.64
PHF1-208ENST00000486845 CFC1BP0CG36 223 aa11.02□□□□□ -0.65
PHF1-208ENST00000486845 DDTP30046 118 aa11.02□□□□□ -0.65
PHF1-208ENST00000486845 Q6ZRX8 168 aa11.02□□□□□ -0.65
PHF1-208ENST00000486845 C9orf153Q5TBE3 101 aa11.01□□□□□ -0.65
PHF1-208ENST00000486845 TRBV10-2A0A0K0K1G8 114 aa11□□□□□ -0.65
PHF1-208ENST00000486845 MYMXA0A1B0GTQ4 84 aa11□□□□□ -0.65
PHF1-208ENST00000486845 KRTAP19-2Q3LHN2 52 aa11□□□□□ -0.65
PHF1-208ENST00000486845 IFI27L1Q96BM0 104 aa11□□□□□ -0.65
PHF1-208ENST00000486845 MT1HP80294 61 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms