RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 SPRR4Q96PI1 79 aa10.68□□□□□ -0.7
GMDS-205ENST00000486793 COX19Q49B96 90 aa10.66□□□□□ -0.7
GMDS-205ENST00000486793 URB1-AS1Q96HZ7 61 aa10.66□□□□□ -0.7
GMDS-205ENST00000486793 C11orf86A6NJI1 115 aa10.65□□□□□ -0.7
GMDS-205ENST00000486793 LINC00158P58513 81 aa10.65□□□□□ -0.7
GMDS-205ENST00000486793 C4orf48Q5BLP8 95 aa10.65□□□□□ -0.7
GMDS-205ENST00000486793 FP248Q71RG6 208 aaPredicted RBP10.65□□□□□ -0.7
GMDS-205ENST00000486793 TMEM170BQ5T4T1 132 aa10.64□□□□□ -0.71
GMDS-205ENST00000486793 UQCC3Q6UW78 93 aa10.64□□□□□ -0.71
GMDS-205ENST00000486793 BAGE3Q86Y29 109 aa10.64□□□□□ -0.71
GMDS-205ENST00000486793 LINC00337Q8N6G1 96 aa10.64□□□□□ -0.71
GMDS-205ENST00000486793 DAND5Q8N907 189 aa10.64□□□□□ -0.71
GMDS-205ENST00000486793 A0A0U1RRA0 63 aa10.63□□□□□ -0.71
GMDS-205ENST00000486793 LINC00614P0C842 121 aa10.63□□□□□ -0.71
GMDS-205ENST00000486793 PMCHL1Q16048 86 aa10.63□□□□□ -0.71
GMDS-205ENST00000486793 SFTA2Q6UW10 78 aa10.63□□□□□ -0.71
GMDS-205ENST00000486793 HBDP02042 147 aa10.62□□□□□ -0.71
GMDS-205ENST00000486793 SEC11CQ9BY50 192 aa10.62□□□□□ -0.71
GMDS-205ENST00000486793 KRTAP13-3Q3SY46 172 aa10.61□□□□□ -0.71
GMDS-205ENST00000486793 Q8NBF4 154 aa10.61□□□□□ -0.71
GMDS-205ENST00000486793 ZNF706Q9Y5V0 76 aaPredicted RBP10.61□□□□□ -0.71
GMDS-205ENST00000486793 C18orf32Q8TCD1 76 aa10.6□□□□□ -0.71
GMDS-205ENST00000486793 ASB16-AS1Q495Z4 193 aa10.58□□□□□ -0.72
GMDS-205ENST00000486793 SMCR5Q8TEV8 140 aa10.58□□□□□ -0.72
GMDS-205ENST00000486793 BOD1L2Q8IYS8 172 aa10.57□□□□□ -0.72
GMDS-205ENST00000486793 PRYO14603 147 aa10.56□□□□□ -0.72
GMDS-205ENST00000486793 SPINK1P00995 79 aa10.56□□□□□ -0.72
GMDS-205ENST00000486793 SMIM13P0DJ93 91 aa10.56□□□□□ -0.72
GMDS-205ENST00000486793 CHTOPQ9Y3Y2 248 aaKnown RBP10.56□□□□□ -0.72
GMDS-205ENST00000486793 TRAPPC1Q9Y5R8 145 aa10.56□□□□□ -0.72
GMDS-205ENST00000486793 ATP6V1G1O75348 118 aa10.55□□□□□ -0.72
GMDS-205ENST00000486793 SPRR1AP35321 89 aa10.55□□□□□ -0.72
GMDS-205ENST00000486793 KRTAP4-1Q9BYQ7 146 aa10.55□□□□□ -0.72
GMDS-205ENST00000486793 KCNQ1DNQ9H478 68 aa10.55□□□□□ -0.72
GMDS-205ENST00000486793 RPS10P5Q9NQ39 176 aa10.55□□□□□ -0.72
GMDS-205ENST00000486793 TMEM223A0PJW6 202 aa10.54□□□□□ -0.72
GMDS-205ENST00000486793 KRTAP4-16G5E9R7 235 aaPredicted RBP10.54□□□□□ -0.72
GMDS-205ENST00000486793 NCR3O14931 201 aa10.54□□□□□ -0.72
GMDS-205ENST00000486793 LINC01547P58512 204 aaPredicted RBP10.53□□□□□ -0.72
GMDS-205ENST00000486793 ETDCA0A1B0GVM5 59 aa10.52□□□□□ -0.73
GMDS-205ENST00000486793 RHEBQ15382 184 aa10.52□□□□□ -0.73
GMDS-205ENST00000486793 LINC00483Q53H64 154 aa10.52□□□□□ -0.73
GMDS-205ENST00000486793 MIR7-3HGQ8N6C7 128 aa10.52□□□□□ -0.73
GMDS-205ENST00000486793 IFITM2Q01629 132 aa10.51□□□□□ -0.73
GMDS-205ENST00000486793 MEIG1Q5JSS6 88 aa10.51□□□□□ -0.73
GMDS-205ENST00000486793 C10orf91Q5T1B1 145 aa10.51□□□□□ -0.73
GMDS-205ENST00000486793 GAGE2AQ6NT46 116 aa10.51□□□□□ -0.73
GMDS-205ENST00000486793 TRBV10-3A0A0K0K1G6 114 aa10.5□□□□□ -0.73
GMDS-205ENST00000486793 SEC61BP60468 96 aaKnown RBP10.5□□□□□ -0.73
GMDS-205ENST00000486793 TRAV12-1A0A0B4J245 112 aa10.48□□□□□ -0.73
GMDS-205ENST00000486793 COMMD7Q86VX2 200 aa10.48□□□□□ -0.73
GMDS-205ENST00000486793 ERC2-IT1O76042 136 aa10.47□□□□□ -0.73
GMDS-205ENST00000486793 HERV-K104P63124 156 aa10.47□□□□□ -0.73
GMDS-205ENST00000486793 MOBPQ13875 183 aa10.47□□□□□ -0.73
GMDS-205ENST00000486793 IGLV9-49A0A0B4J1Y8 123 aa10.46□□□□□ -0.73
GMDS-205ENST00000486793 B5MCH6 92 aa10.46□□□□□ -0.73
GMDS-205ENST00000486793 SSBP3-AS1Q7Z2R9 100 aa10.46□□□□□ -0.73
GMDS-205ENST00000486793 Q8N377 158 aa10.46□□□□□ -0.73
GMDS-205ENST00000486793 IFI27L1Q96BM0 104 aa10.46□□□□□ -0.73
GMDS-205ENST00000486793 NDUFA12Q9UI09 145 aa10.46□□□□□ -0.73
GMDS-205ENST00000486793 LINC00587B1AMM8 73 aa10.45□□□□□ -0.74
GMDS-205ENST00000486793 LCE2DQ5TA82 110 aaPredicted RBP10.45□□□□□ -0.74
GMDS-205ENST00000486793 RPS29P62273 56 aaKnown RBP10.43□□□□□ -0.74
GMDS-205ENST00000486793 S100A12P80511 92 aa10.43□□□□□ -0.74
GMDS-205ENST00000486793 SLC25A20O43772 301 aa10.42□□□□□ -0.74
GMDS-205ENST00000486793 MYMXA0A1B0GTQ4 84 aa10.41□□□□□ -0.74
GMDS-205ENST00000486793 DDTP30046 118 aa10.41□□□□□ -0.74
GMDS-205ENST00000486793 FAM19A2Q8N3H0 131 aa10.41□□□□□ -0.74
GMDS-205ENST00000486793 CHCHD1Q96BP2 118 aaKnown RBP10.41□□□□□ -0.74
GMDS-205ENST00000486793 Q9BRP9 147 aa10.41□□□□□ -0.74
GMDS-205ENST00000486793 MAP1LC3CQ9BXW4 147 aa10.41□□□□□ -0.74
GMDS-205ENST00000486793 FSIP2Q5CZC0 6907 aa10.39□□□□□ -0.75
GMDS-205ENST00000486793 LOC107984156A0A0G2JMH3 177 aa10.39□□□□□ -0.75
GMDS-205ENST00000486793 XP32Q5T750 250 aa10.39□□□□□ -0.75
GMDS-205ENST00000486793 ARL17AQ8IVW1 177 aa10.39□□□□□ -0.75
GMDS-205ENST00000486793 TRBV10-2A0A0K0K1G8 114 aa10.37□□□□□ -0.75
GMDS-205ENST00000486793 Q6ZRX8 168 aa10.37□□□□□ -0.75
GMDS-205ENST00000486793 TSPEAR-AS2P59090 65 aa10.36□□□□□ -0.75
GMDS-205ENST00000486793 APOC3P02656 99 aa10.35□□□□□ -0.75
GMDS-205ENST00000486793 LCE2CQ5TA81 110 aa10.35□□□□□ -0.75
GMDS-205ENST00000486793 H0Y8G0 127 aa10.34□□□□□ -0.75
GMDS-205ENST00000486793 LEPROTO15243 131 aa10.33□□□□□ -0.76
GMDS-205ENST00000486793 C9orf153Q5TBE3 101 aa10.33□□□□□ -0.76
GMDS-205ENST00000486793 SPANXB1Q9NS25 103 aaPredicted RBP10.33□□□□□ -0.76
GMDS-205ENST00000486793 CRCT1Q9UGL9 99 aa10.33□□□□□ -0.76
GMDS-205ENST00000486793 HSBP1O75506 76 aa10.32□□□□□ -0.76
GMDS-205ENST00000486793 IGLV6-57P01721 117 aa10.32□□□□□ -0.76
GMDS-205ENST00000486793 S100A7L2Q5SY68 101 aa10.32□□□□□ -0.76
GMDS-205ENST00000486793 YPEL4Q96NS1 127 aa10.31□□□□□ -0.76
GMDS-205ENST00000486793 J3QQQ9 107 aa10.3□□□□□ -0.76
GMDS-205ENST00000486793 SNAPINO95295 136 aa10.3□□□□□ -0.76
GMDS-205ENST00000486793 JOSD1Q15040 202 aaPredicted RBP10.3□□□□□ -0.76
GMDS-205ENST00000486793 ST20-AS1Q8NBB2 130 aa10.3□□□□□ -0.76
GMDS-205ENST00000486793 MIEN1Q9BRT3 115 aa10.3□□□□□ -0.76
GMDS-205ENST00000486793 TRAV23DV6A0A075B6W5 121 aa10.29□□□□□ -0.76
GMDS-205ENST00000486793 NDUFC2O95298 119 aa10.29□□□□□ -0.76
GMDS-205ENST00000486793 SVBPQ8N300 66 aa10.29□□□□□ -0.76
GMDS-205ENST00000486793 ZNF73O43830 326 aaPredicted RBP10.27□□□□□ -0.77
GMDS-205ENST00000486793 KRTAP19-2Q3LHN2 52 aa10.27□□□□□ -0.77
GMDS-205ENST00000486793 EIF4EBP3O60516 100 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms