RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 COX8AP10176 69 aa4.55□□□□□ -1.68
UBR4-214ENST00000486515 KIAA0087Q14695 138 aa4.55□□□□□ -1.68
UBR4-214ENST00000486515 SPANXCQ9NY87 97 aa4.55□□□□□ -1.68
UBR4-214ENST00000486515 ERG28Q9UKR5 140 aa4.55□□□□□ -1.68
UBR4-214ENST00000486515 DNAH2Q9P225 4427 aa4.55□□□□□ -1.68
UBR4-214ENST00000486515 IGKV2D-26A0A0A0MRZ7 120 aa4.54□□□□□ -1.68
UBR4-214ENST00000486515 A0A0U1RRA0 63 aa4.54□□□□□ -1.68
UBR4-214ENST00000486515 NDUFC2-KCTD14E9PQ53 114 aa4.54□□□□□ -1.68
UBR4-214ENST00000486515 WFDC2Q14508 124 aa4.54□□□□□ -1.68
UBR4-214ENST00000486515 Q6ZVH6 145 aa4.54□□□□□ -1.68
UBR4-214ENST00000486515 PCP2Q8IVA1 136 aa4.54□□□□□ -1.68
UBR4-214ENST00000486515 UQCR10Q9UDW1 63 aa4.54□□□□□ -1.68
UBR4-214ENST00000486515 A0A0J9YXY3 114 aa4.53□□□□□ -1.68
UBR4-214ENST00000486515 TIMM17BO60830 172 aa4.53□□□□□ -1.68
UBR4-214ENST00000486515 SMIM13P0DJ93 91 aa4.53□□□□□ -1.68
UBR4-214ENST00000486515 INAFM2P0DMQ5 153 aa4.53□□□□□ -1.68
UBR4-214ENST00000486515 HNRNPA3P51991 378 aaKnown RBP4.53□□□□□ -1.68
UBR4-214ENST00000486515 TSPEAR-AS2P59090 65 aa4.53□□□□□ -1.68
UBR4-214ENST00000486515 GAGE2BQ13066 116 aa4.53□□□□□ -1.68
UBR4-214ENST00000486515 GAGE2EQ4V326 116 aa4.53□□□□□ -1.68
UBR4-214ENST00000486515 C9orf163Q8N9P6 203 aa4.53□□□□□ -1.68
UBR4-214ENST00000486515 HIST1H4GQ99525 98 aa4.53□□□□□ -1.68
UBR4-214ENST00000486515 C6orf48Q9UBA6 75 aa4.53□□□□□ -1.68
UBR4-214ENST00000486515 GAGE2DQ9UEU5 116 aa4.53□□□□□ -1.68
UBR4-214ENST00000486515 C16orf90A8MZG2 172 aa4.52□□□□□ -1.69
UBR4-214ENST00000486515 CDK2AP2O75956 126 aa4.52□□□□□ -1.69
UBR4-214ENST00000486515 RPL24P83731 157 aaKnown RBP4.52□□□□□ -1.69
UBR4-214ENST00000486515 C9orf116Q5BN46 136 aaPredicted RBP4.52□□□□□ -1.69
UBR4-214ENST00000486515 C10orf25Q5T742 122 aa4.52□□□□□ -1.69
UBR4-214ENST00000486515 BOD1L2Q8IYS8 172 aa4.52□□□□□ -1.69
UBR4-214ENST00000486515 MUC2Q02817 5179 aa4.51□□□□□ -1.69
UBR4-214ENST00000486515 IGKV2-24A0A0C4DH68 120 aa4.51□□□□□ -1.69
UBR4-214ENST00000486515 TLX1NBP0CAT3 122 aa4.51□□□□□ -1.69
UBR4-214ENST00000486515 IFITM1P13164 125 aa4.51□□□□□ -1.69
UBR4-214ENST00000486515 MIR7-3HGQ8N6C7 128 aa4.51□□□□□ -1.69
UBR4-214ENST00000486515 NKAPP1Q8N9T2 125 aa4.51□□□□□ -1.69
UBR4-214ENST00000486515 TTTY13Q9BZ97 58 aa4.51□□□□□ -1.69
UBR4-214ENST00000486515 FLG2Q5D862 2391 aaPredicted RBP4.51□□□□□ -1.69
UBR4-214ENST00000486515 APOBP04114 4563 aaKnown RBP4.5□□□□□ -1.69
UBR4-214ENST00000486515 J3QR89 54 aa4.5□□□□□ -1.69
UBR4-214ENST00000486515 NPC2P61916 151 aa4.5□□□□□ -1.69
UBR4-214ENST00000486515 HIGD1BQ9P298 99 aa4.5□□□□□ -1.69
UBR4-214ENST00000486515 SLPIP03973 132 aa4.49□□□□□ -1.69
UBR4-214ENST00000486515 KRTAP10-2P60368 255 aa4.49□□□□□ -1.69
UBR4-214ENST00000486515 TAL2Q16559 108 aa4.49□□□□□ -1.69
UBR4-214ENST00000486515 SERTAD4-AS1Q5TG53 156 aa4.49□□□□□ -1.69
UBR4-214ENST00000486515 Q6ZRP5 223 aa4.49□□□□□ -1.69
UBR4-214ENST00000486515 DAND5Q8N907 189 aa4.49□□□□□ -1.69
UBR4-214ENST00000486515 SPANXDQ9BXN6 97 aa4.49□□□□□ -1.69
UBR4-214ENST00000486515 SND1-IT1Q9HBX3 110 aa4.49□□□□□ -1.69
UBR4-214ENST00000486515 XAGE1AQ9HD64 81 aa4.49□□□□□ -1.69
UBR4-214ENST00000486515 SPANXB1Q9NS25 103 aaPredicted RBP4.49□□□□□ -1.69
UBR4-214ENST00000486515 PKD1P98161 4303 aa4.48□□□□□ -1.69
UBR4-214ENST00000486515 DNAH6Q9C0G6 4158 aa4.48□□□□□ -1.69
UBR4-214ENST00000486515 HSD52Q0P140 79 aa4.48□□□□□ -1.69
UBR4-214ENST00000486515 LINC01620Q4KN68 170 aa4.48□□□□□ -1.69
UBR4-214ENST00000486515 S100A7L2Q5SY68 101 aa4.48□□□□□ -1.69
UBR4-214ENST00000486515 SDIM1Q6ZPB5 146 aa4.48□□□□□ -1.69
UBR4-214ENST00000486515 GTF2H5Q6ZYL4 71 aa4.48□□□□□ -1.69
UBR4-214ENST00000486515 A0A096LNI7 61 aa4.47□□□□□ -1.69
UBR4-214ENST00000486515 FUSP35637 526 aaKnown RBP eCLIP4.47□□□□□ -1.69
UBR4-214ENST00000486515 MUSTN1Q8IVN3 82 aa4.47□□□□□ -1.69
UBR4-214ENST00000486515 OR13C6PQ8NH95 151 aa4.47□□□□□ -1.69
UBR4-214ENST00000486515 LINC00308Q8TCZ7 52 aa4.47□□□□□ -1.69
UBR4-214ENST00000486515 RAB37Q96AX2 223 aa4.47□□□□□ -1.69
UBR4-214ENST00000486515 TMEM126AQ9H061 195 aa4.47□□□□□ -1.69
UBR4-214ENST00000486515 PLA2G2DQ9UNK4 145 aa4.47□□□□□ -1.69
UBR4-214ENST00000486515 TRAV13-2A0A0B4J235 113 aa4.46□□□□□ -1.7
UBR4-214ENST00000486515 M0QXV9 152 aa4.46□□□□□ -1.7
UBR4-214ENST00000486515 NDUFC2O95298 119 aa4.46□□□□□ -1.7
UBR4-214ENST00000486515 UBE2BP63146 152 aa4.46□□□□□ -1.7
UBR4-214ENST00000486515 ADAMTSL4-AS1Q5T5F5 129 aa4.46□□□□□ -1.7
UBR4-214ENST00000486515 FAM19A5Q7Z5A7 132 aaPredicted RBP4.46□□□□□ -1.7
UBR4-214ENST00000486515 CEND1Q8N111 149 aa4.46□□□□□ -1.7
UBR4-214ENST00000486515 C7orf33Q8WU49 177 aa4.46□□□□□ -1.7
UBR4-214ENST00000486515 TP73-AS1Q9UF72 201 aa4.46□□□□□ -1.7
UBR4-214ENST00000486515 A6NDN8 102 aa4.45□□□□□ -1.7
UBR4-214ENST00000486515 EPM2AB3EWF7 344 aa4.45□□□□□ -1.7
UBR4-214ENST00000486515 CHTF8P0CG12 524 aa4.45□□□□□ -1.7
UBR4-214ENST00000486515 HINT1P49773 126 aaPredicted RBP4.45□□□□□ -1.7
UBR4-214ENST00000486515 SPACA4Q8TDM5 124 aa4.45□□□□□ -1.7
UBR4-214ENST00000486515 LITAFQ99732 161 aa4.45□□□□□ -1.7
UBR4-214ENST00000486515 PPDPFQ9H3Y8 114 aa4.45□□□□□ -1.7
UBR4-214ENST00000486515 DNAH17Q9UFH2 4485 aa4.44□□□□□ -1.7
UBR4-214ENST00000486515 A0A087WYN8 130 aa4.44□□□□□ -1.7
UBR4-214ENST00000486515 M0R378 163 aa4.44□□□□□ -1.7
UBR4-214ENST00000486515 NCR3O14931 201 aa4.44□□□□□ -1.7
UBR4-214ENST00000486515 RPS28P62857 69 aaKnown RBP4.44□□□□□ -1.7
UBR4-214ENST00000486515 BATFQ16520 125 aa4.44□□□□□ -1.7
UBR4-214ENST00000486515 C9orf129Q5T035 196 aaKnown RBP4.44□□□□□ -1.7
UBR4-214ENST00000486515 C2orf91Q6ZV80 131 aa4.44□□□□□ -1.7
UBR4-214ENST00000486515 MRPL55Q7Z7F7 128 aaKnown RBP4.44□□□□□ -1.7
UBR4-214ENST00000486515 SMIM20Q8N5G0 67 aa4.44□□□□□ -1.7
UBR4-214ENST00000486515 LRP1BQ9NZR2 4599 aa4.43□□□□□ -1.7
UBR4-214ENST00000486515 LOC107984156A0A0G2JMH3 177 aa4.43□□□□□ -1.7
UBR4-214ENST00000486515 TRBV10-2A0A0K0K1G8 114 aa4.43□□□□□ -1.7
UBR4-214ENST00000486515 SNCGO76070 127 aa4.43□□□□□ -1.7
UBR4-214ENST00000486515 KRTAP10-1P60331 282 aa4.43□□□□□ -1.7
UBR4-214ENST00000486515 Q1RN00 199 aa4.43□□□□□ -1.7
UBR4-214ENST00000486515 ARL17AQ8IVW1 177 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms