RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 RPL13AP40429 203 aaKnown RBP11.01□□□□□ -0.65
PRPF40A-209ENST00000486100 SFTA2Q6UW10 78 aa11.01□□□□□ -0.65
PRPF40A-209ENST00000486100 IFI27L1Q96BM0 104 aa11.01□□□□□ -0.65
PRPF40A-209ENST00000486100 TRAV12-1A0A0B4J245 112 aa11□□□□□ -0.65
PRPF40A-209ENST00000486100 ZNF625Q96I27 306 aaPredicted RBP11□□□□□ -0.65
PRPF40A-209ENST00000486100 SND1-IT1Q9HBX3 110 aa11□□□□□ -0.65
PRPF40A-209ENST00000486100 LINC00310P59036 64 aa10.98□□□□□ -0.65
PRPF40A-209ENST00000486100 TMEM223A0PJW6 202 aa10.97□□□□□ -0.65
PRPF40A-209ENST00000486100 VPREB1P12018 145 aa10.97□□□□□ -0.65
PRPF40A-209ENST00000486100 RPL24P83731 157 aaKnown RBP10.96□□□□□ -0.65
PRPF40A-209ENST00000486100 IGKV2-28A0A075B6P5 120 aa10.95□□□□□ -0.66
PRPF40A-209ENST00000486100 IGKV2D-28P01615 120 aa10.95□□□□□ -0.66
PRPF40A-209ENST00000486100 FAM19A2Q8N3H0 131 aa10.95□□□□□ -0.66
PRPF40A-209ENST00000486100 UBE2AP49459 152 aa10.94□□□□□ -0.66
PRPF40A-209ENST00000486100 KRTAP13-1Q8IUC0 172 aa10.94□□□□□ -0.66
PRPF40A-209ENST00000486100 C5orf52A6NGY3 159 aa10.93□□□□□ -0.66
PRPF40A-209ENST00000486100 LEPROTL1O95214 131 aa10.93□□□□□ -0.66
PRPF40A-209ENST00000486100 LINC00158P58513 81 aa10.93□□□□□ -0.66
PRPF40A-209ENST00000486100 HSPB8Q9UJY1 196 aa10.93□□□□□ -0.66
PRPF40A-209ENST00000486100 RNF213Q63HN8 5207 aa10.92□□□□□ -0.66
PRPF40A-209ENST00000486100 S100A2P29034 98 aa10.91□□□□□ -0.66
PRPF40A-209ENST00000486100 Q8NDZ9 215 aa10.91□□□□□ -0.66
PRPF40A-209ENST00000486100 CRYGAP11844 174 aa10.9□□□□□ -0.66
PRPF40A-209ENST00000486100 HIST3H2BBQ8N257 126 aa10.9□□□□□ -0.66
PRPF40A-209ENST00000486100 A0A087X002 238 aa10.89□□□□□ -0.67
PRPF40A-209ENST00000486100 A0A0U1RRA0 63 aa10.89□□□□□ -0.67
PRPF40A-209ENST00000486100 SNRPEP62304 92 aaKnown RBP10.89□□□□□ -0.67
PRPF40A-209ENST00000486100 TMEM126AQ9H061 195 aa10.89□□□□□ -0.67
PRPF40A-209ENST00000486100 TMEM238C9JI98 176 aa10.88□□□□□ -0.67
PRPF40A-209ENST00000486100 TMA7Q9Y2S6 64 aaKnown RBP10.88□□□□□ -0.67
PRPF40A-209ENST00000486100 H0Y8G0 127 aa10.87□□□□□ -0.67
PRPF40A-209ENST00000486100 M0R378 163 aa10.87□□□□□ -0.67
PRPF40A-209ENST00000486100 SMIM13P0DJ93 91 aa10.87□□□□□ -0.67
PRPF40A-209ENST00000486100 HERV-K104P63124 156 aa10.87□□□□□ -0.67
PRPF40A-209ENST00000486100 FAM19A1Q7Z5A9 133 aa10.87□□□□□ -0.67
PRPF40A-209ENST00000486100 ANAPC11Q9NYG5 84 aa10.87□□□□□ -0.67
PRPF40A-209ENST00000486100 TYMSOSQ8TAI1 123 aa10.86□□□□□ -0.67
PRPF40A-209ENST00000486100 LINC00587B1AMM8 73 aa10.85□□□□□ -0.67
PRPF40A-209ENST00000486100 PRLHP81277 87 aa10.85□□□□□ -0.67
PRPF40A-209ENST00000486100 MEIG1Q5JSS6 88 aa10.85□□□□□ -0.67
PRPF40A-209ENST00000486100 HIST1H2BLQ99880 126 aa10.85□□□□□ -0.67
PRPF40A-209ENST00000486100 MAP1LC3CQ9BXW4 147 aa10.85□□□□□ -0.67
PRPF40A-209ENST00000486100 NDUFA12Q9UI09 145 aa10.85□□□□□ -0.67
PRPF40A-209ENST00000486100 LPAP08519 4548 aa10.85□□□□□ -0.67
PRPF40A-209ENST00000486100 FABP4P15090 132 aa10.84□□□□□ -0.67
PRPF40A-209ENST00000486100 AKR1D1P51857 326 aa10.84□□□□□ -0.67
PRPF40A-209ENST00000486100 MYMXA0A1B0GTQ4 84 aa10.83□□□□□ -0.68
PRPF40A-209ENST00000486100 FAM229BQ4G0N7 80 aa10.83□□□□□ -0.68
PRPF40A-209ENST00000486100 MIR7-3HGQ8N6C7 128 aa10.83□□□□□ -0.68
PRPF40A-209ENST00000486100 PLNP26678 52 aa10.82□□□□□ -0.68
PRPF40A-209ENST00000486100 BOD1L2Q8IYS8 172 aa10.82□□□□□ -0.68
PRPF40A-209ENST00000486100 LEPROTO15243 131 aa10.81□□□□□ -0.68
PRPF40A-209ENST00000486100 TSPAN13O95857 204 aa10.81□□□□□ -0.68
PRPF40A-209ENST00000486100 PRR4Q16378 134 aa10.81□□□□□ -0.68
PRPF40A-209ENST00000486100 KRTAP13-2Q52LG2 175 aa10.81□□□□□ -0.68
PRPF40A-209ENST00000486100 PET117Q6UWS5 81 aa10.81□□□□□ -0.68
PRPF40A-209ENST00000486100 PLEKHB2Q96CS7 222 aa10.8□□□□□ -0.68
PRPF40A-209ENST00000486100 SYS1-DBNDD2H3BUS1 97 aa10.79□□□□□ -0.68
PRPF40A-209ENST00000486100 DPM2O94777 84 aa10.79□□□□□ -0.68
PRPF40A-209ENST00000486100 IGKV2D-26A0A0A0MRZ7 120 aa10.78□□□□□ -0.68
PRPF40A-209ENST00000486100 C20orf202A1L168 122 aa10.78□□□□□ -0.68
PRPF40A-209ENST00000486100 TSPEAR-AS2P59090 65 aa10.78□□□□□ -0.68
PRPF40A-209ENST00000486100 J3QQQ9 107 aa10.77□□□□□ -0.69
PRPF40A-209ENST00000486100 C3orf79P0CE67 100 aa10.77□□□□□ -0.69
PRPF40A-209ENST00000486100 HERVK_113P61574 105 aa10.77□□□□□ -0.69
PRPF40A-209ENST00000486100 PMCHL2Q9BQD1 86 aa10.77□□□□□ -0.69
PRPF40A-209ENST00000486100 PRYO14603 147 aa10.76□□□□□ -0.69
PRPF40A-209ENST00000486100 NCR3O14931 201 aa10.76□□□□□ -0.69
PRPF40A-209ENST00000486100 IGKCP01834 107 aa10.76□□□□□ -0.69
PRPF40A-209ENST00000486100 KRTDAPP60985 99 aa10.76□□□□□ -0.69
PRPF40A-209ENST00000486100 HIGD2AQ9BW72 106 aa10.76□□□□□ -0.69
PRPF40A-209ENST00000486100 LOC107984156A0A0G2JMH3 177 aa10.75□□□□□ -0.69
PRPF40A-209ENST00000486100 LINC01545Q5VT33 79 aa10.75□□□□□ -0.69
PRPF40A-209ENST00000486100 ARL17AQ8IVW1 177 aa10.75□□□□□ -0.69
PRPF40A-209ENST00000486100 KCNQ1DNQ9H478 68 aa10.75□□□□□ -0.69
PRPF40A-209ENST00000486100 NMUP48645 174 aa10.74□□□□□ -0.69
PRPF40A-209ENST00000486100 SPRR1AP35321 89 aa10.73□□□□□ -0.69
PRPF40A-209ENST00000486100 LINC00337Q8N6G1 96 aa10.73□□□□□ -0.69
PRPF40A-209ENST00000486100 LGALS3P17931 250 aaKnown RBP10.72□□□□□ -0.69
PRPF40A-209ENST00000486100 DAND5Q8N907 189 aa10.72□□□□□ -0.69
PRPF40A-209ENST00000486100 LINC00304Q8N9R0 145 aa10.72□□□□□ -0.69
PRPF40A-209ENST00000486100 TRBV10-3A0A0K0K1G6 114 aa10.71□□□□□ -0.69
PRPF40A-209ENST00000486100 KRTAP4-16G5E9R7 235 aaPredicted RBP10.7□□□□□ -0.7
PRPF40A-209ENST00000486100 SPRR4Q96PI1 79 aa10.7□□□□□ -0.7
PRPF40A-209ENST00000486100 TRBV10-2A0A0K0K1G8 114 aa10.69□□□□□ -0.7
PRPF40A-209ENST00000486100 ETDCA0A1B0GVM5 59 aa10.69□□□□□ -0.7
PRPF40A-209ENST00000486100 CTAG1AP78358 180 aa10.69□□□□□ -0.7
PRPF40A-209ENST00000486100 S100A12P80511 92 aa10.69□□□□□ -0.7
PRPF40A-209ENST00000486100 ZNF706Q9Y5V0 76 aaPredicted RBP10.69□□□□□ -0.7
PRPF40A-209ENST00000486100 C3orf22Q8N5N4 141 aa10.68□□□□□ -0.7
PRPF40A-209ENST00000486100 SMCR5Q8TEV8 140 aa10.68□□□□□ -0.7
PRPF40A-209ENST00000486100 E9PLD3 99 aa10.67□□□□□ -0.7
PRPF40A-209ENST00000486100 JOSD1Q15040 202 aaPredicted RBP10.67□□□□□ -0.7
PRPF40A-209ENST00000486100 MIEN1Q9BRT3 115 aa10.67□□□□□ -0.7
PRPF40A-209ENST00000486100 DDTP30046 118 aa10.66□□□□□ -0.7
PRPF40A-209ENST00000486100 A0A0J9YXY3 114 aa10.65□□□□□ -0.7
PRPF40A-209ENST00000486100 NDUFC2O95298 119 aa10.65□□□□□ -0.7
PRPF40A-209ENST00000486100 SCGB1D1O95968 90 aa10.65□□□□□ -0.7
PRPF40A-209ENST00000486100 SPANXB1Q9NS25 103 aaPredicted RBP10.65□□□□□ -0.7
PRPF40A-209ENST00000486100 B5MCH6 92 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms