RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 PRUNE2Q8WUY3 3088 aa7.39□□□□□ -1.23
SRGAP3-207ENST00000485983 SOSTDC1Q6X4U4 206 aa7.38□□□□□ -1.23
SRGAP3-207ENST00000485983 A8MTW9 85 aa7.38□□□□□ -1.23
SRGAP3-207ENST00000485983 KRTAP24-1Q3LI83 254 aa7.38□□□□□ -1.23
SRGAP3-207ENST00000485983 TYMSOSQ8TAI1 123 aa7.38□□□□□ -1.23
SRGAP3-207ENST00000485983 PLA2G1BP04054 148 aaKnown RBP7.38□□□□□ -1.23
SRGAP3-207ENST00000485983 PMAIP1Q13794 54 aa7.38□□□□□ -1.23
SRGAP3-207ENST00000485983 Q6ZRP5 223 aa7.38□□□□□ -1.23
SRGAP3-207ENST00000485983 CCDC179H3BU77 68 aa7.37□□□□□ -1.23
SRGAP3-207ENST00000485983 C10orf142B7Z368 130 aa7.37□□□□□ -1.23
SRGAP3-207ENST00000485983 H3BNG1 76 aa7.37□□□□□ -1.23
SRGAP3-207ENST00000485983 C1orf64Q8NEQ6 169 aa7.37□□□□□ -1.23
SRGAP3-207ENST00000485983 RTL8CO15255 209 aa7.37□□□□□ -1.23
SRGAP3-207ENST00000485983 LINC00167Q96N53 147 aa7.37□□□□□ -1.23
SRGAP3-207ENST00000485983 RAI1Q7Z5J4 1906 aaPredicted RBP7.37□□□□□ -1.23
SRGAP3-207ENST00000485983 PRRC2CQ9Y520 2896 aaKnown RBP7.36□□□□□ -1.23
SRGAP3-207ENST00000485983 NBDYA0A0U1RRE5 68 aa7.36□□□□□ -1.23
SRGAP3-207ENST00000485983 LINC00315P59091 139 aa7.36□□□□□ -1.23
SRGAP3-207ENST00000485983 C1orf195Q5TG92 126 aa7.36□□□□□ -1.23
SRGAP3-207ENST00000485983 KIAA0087Q14695 138 aa7.36□□□□□ -1.23
SRGAP3-207ENST00000485983 TP53AIP1Q9HCN2 124 aa7.35□□□□□ -1.23
SRGAP3-207ENST00000485983 AGRNO00468 2067 aa7.35□□□□□ -1.23
SRGAP3-207ENST00000485983 SETD2Q9BYW2 2564 aaPredicted RBP7.35□□□□□ -1.23
SRGAP3-207ENST00000485983 C11orf72Q8NBR9 251 aa7.34□□□□□ -1.24
SRGAP3-207ENST00000485983 TMEM254Q8TBM7 123 aa7.33□□□□□ -1.24
SRGAP3-207ENST00000485983 UNC80Q8N2C7 3258 aa7.33□□□□□ -1.24
SRGAP3-207ENST00000485983 URB1-AS1Q96HZ7 61 aa7.33□□□□□ -1.24
SRGAP3-207ENST00000485983 ATG2AQ2TAZ0 1938 aa7.33□□□□□ -1.24
SRGAP3-207ENST00000485983 LRP4O75096 1905 aa7.32□□□□□ -1.24
SRGAP3-207ENST00000485983 ATP11AUNQ6ZP68 121 aa7.32□□□□□ -1.24
SRGAP3-207ENST00000485983 TET2Q6N021 2002 aaPredicted RBP7.32□□□□□ -1.24
SRGAP3-207ENST00000485983 PSPHP1O15172 72 aa7.32□□□□□ -1.24
SRGAP3-207ENST00000485983 Q8NBF4 154 aa7.32□□□□□ -1.24
SRGAP3-207ENST00000485983 ACYP2P14621 99 aa7.31□□□□□ -1.24
SRGAP3-207ENST00000485983 PKD1L2Q7Z442 2459 aa7.31□□□□□ -1.24
SRGAP3-207ENST00000485983 IGHV3OR16-9A0A0B4J2B5 98 aa7.31□□□□□ -1.24
SRGAP3-207ENST00000485983 CXCL6P80162 114 aa7.31□□□□□ -1.24
SRGAP3-207ENST00000485983 A0A1B0GU69 56 aa7.31□□□□□ -1.24
SRGAP3-207ENST00000485983 PHF5AQ7RTV0 110 aaKnown RBP7.31□□□□□ -1.24
SRGAP3-207ENST00000485983 LINC00313P59037 77 aa7.3□□□□□ -1.24
SRGAP3-207ENST00000485983 C6orf48Q9UBA6 75 aa7.3□□□□□ -1.24
SRGAP3-207ENST00000485983 ADAMTS20P59510 1910 aa7.3□□□□□ -1.24
SRGAP3-207ENST00000485983 COX6B2Q6YFQ2 88 aa7.3□□□□□ -1.24
SRGAP3-207ENST00000485983 LINC00846Q9NV44 126 aa7.29□□□□□ -1.24
SRGAP3-207ENST00000485983 IGLV5-39A0A0G2JS06 123 aa7.28□□□□□ -1.24
SRGAP3-207ENST00000485983 EPG5Q9HCE0 2579 aa7.28□□□□□ -1.24
SRGAP3-207ENST00000485983 RPL37AP61513 92 aaKnown RBP7.28□□□□□ -1.24
SRGAP3-207ENST00000485983 COL5A1P20908 1838 aaPredicted RBP7.28□□□□□ -1.24
SRGAP3-207ENST00000485983 USP9YO00507 2555 aaPredicted RBP7.27□□□□□ -1.24
SRGAP3-207ENST00000485983 A0A1B0GW54 56 aa7.27□□□□□ -1.25
SRGAP3-207ENST00000485983 SPATA3Q8NHX4 192 aa7.27□□□□□ -1.25
SRGAP3-207ENST00000485983 CDH23Q9H251 3354 aa7.27□□□□□ -1.25
SRGAP3-207ENST00000485983 CHTF8P0CG12 524 aa7.27□□□□□ -1.25
SRGAP3-207ENST00000485983 LINC00310P59036 64 aa7.27□□□□□ -1.25
SRGAP3-207ENST00000485983 EML5Q05BV3 1969 aa7.27□□□□□ -1.25
SRGAP3-207ENST00000485983 EPM2AB3EWF7 344 aa7.26□□□□□ -1.25
SRGAP3-207ENST00000485983 SMIM29Q86T20 159 aa7.26□□□□□ -1.25
SRGAP3-207ENST00000485983 LINC00588Q9Y4M8 146 aa7.26□□□□□ -1.25
SRGAP3-207ENST00000485983 A0A096LNJ9 63 aa7.25□□□□□ -1.25
SRGAP3-207ENST00000485983 Q96NJ1 140 aa7.25□□□□□ -1.25
SRGAP3-207ENST00000485983 XIRP2A4UGR9 3374 aa7.24□□□□□ -1.25
SRGAP3-207ENST00000485983 BCE1O60756 84 aa7.24□□□□□ -1.25
SRGAP3-207ENST00000485983 Q6ZRX8 168 aa7.24□□□□□ -1.25
SRGAP3-207ENST00000485983 Q9UF83 564 aa7.24□□□□□ -1.25
SRGAP3-207ENST00000485983 CPAMD8Q8IZJ3 1885 aa7.23□□□□□ -1.25
SRGAP3-207ENST00000485983 LINC00476Q8WZB0 136 aa7.23□□□□□ -1.25
SRGAP3-207ENST00000485983 ELOF1P60002 83 aaKnown RBP7.23□□□□□ -1.25
SRGAP3-207ENST00000485983 CHD9Q3L8U1 2897 aa7.23□□□□□ -1.25
SRGAP3-207ENST00000485983 Q8NAQ8 132 aa7.22□□□□□ -1.25
SRGAP3-207ENST00000485983 H3BPC8 53 aa7.21□□□□□ -1.26
SRGAP3-207ENST00000485983 CDIP1Q9H305 208 aa7.2□□□□□ -1.26
SRGAP3-207ENST00000485983 GVQW2A0A096LPI5 108 aaPredicted RBP7.2□□□□□ -1.26
SRGAP3-207ENST00000485983 FAM19A4Q96LR4 140 aa7.2□□□□□ -1.26
SRGAP3-207ENST00000485983 SPAG11AQ6PDA7 123 aa7.19□□□□□ -1.26
SRGAP3-207ENST00000485983 C8orf87E5RJ46 101 aa7.19□□□□□ -1.26
SRGAP3-207ENST00000485983 HECTD1Q9ULT8 2610 aa7.18□□□□□ -1.26
SRGAP3-207ENST00000485983 DNAH10OSP0CZ25 163 aa7.18□□□□□ -1.26
SRGAP3-207ENST00000485983 TRAV22A0A0B4J277 110 aa7.18□□□□□ -1.26
SRGAP3-207ENST00000485983 IGLV5-45A0A087WSX0 123 aa7.17□□□□□ -1.26
SRGAP3-207ENST00000485983 ST20-AS1Q8NBB2 130 aa7.17□□□□□ -1.26
SRGAP3-207ENST00000485983 ACANP16112 2415 aa7.17□□□□□ -1.26
SRGAP3-207ENST00000485983 LOC101927531A0A1B0GV80 90 aa7.14□□□□□ -1.27
SRGAP3-207ENST00000485983 LINC00304Q8N9R0 145 aa7.14□□□□□ -1.27
SRGAP3-207ENST00000485983 LINC01546A6NGU7 62 aa7.13□□□□□ -1.27
SRGAP3-207ENST00000485983 IGLV8-61A0A075B6I0 122 aa7.12□□□□□ -1.27
SRGAP3-207ENST00000485983 Q6ZQT0 140 aa7.12□□□□□ -1.27
SRGAP3-207ENST00000485983 LOC110117498A0A087WWA1 95 aa7.11□□□□□ -1.27
SRGAP3-207ENST00000485983 TRBV7-4A0A0J9YYF1 115 aa7.11□□□□□ -1.27
SRGAP3-207ENST00000485983 K7EIL1 84 aa7.11□□□□□ -1.27
SRGAP3-207ENST00000485983 SZT2Q5T011 3432 aa7.1□□□□□ -1.27
SRGAP3-207ENST00000485983 MRPL34Q9BQ48 92 aaKnown RBP7.1□□□□□ -1.27
SRGAP3-207ENST00000485983 LINC00336Q6ZUF6 198 aa7.1□□□□□ -1.27
SRGAP3-207ENST00000485983 A8MWP4 228 aa7.1□□□□□ -1.27
SRGAP3-207ENST00000485983 SSBP3-AS1Q7Z2R9 100 aa7.1□□□□□ -1.27
SRGAP3-207ENST00000485983 COL4A2P08572 1712 aa7.09□□□□□ -1.27
SRGAP3-207ENST00000485983 FAM218AQ96MZ4 157 aa7.09□□□□□ -1.28
SRGAP3-207ENST00000485983 TRIOO75962 3097 aa7.08□□□□□ -1.28
SRGAP3-207ENST00000485983 MGAM2Q2M2H8 2515 aa7.07□□□□□ -1.28
SRGAP3-207ENST00000485983 FAM168BA1KXE4 195 aa7.07□□□□□ -1.28
SRGAP3-207ENST00000485983 SMR3BP02814 79 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms