RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 ZNF706Q9Y5V0 76 aaPredicted RBP3.47□□□□□ -1.85
SMC4-217ENST00000485867 NEBP20929 6669 aa3.47□□□□□ -1.85
SMC4-217ENST00000485867 C9orf92A6NGG3 77 aa3.46□□□□□ -1.86
SMC4-217ENST00000485867 CXCL5P42830 114 aa3.46□□□□□ -1.86
SMC4-217ENST00000485867 S100ZQ8WXG8 99 aa3.46□□□□□ -1.86
SMC4-217ENST00000485867 TMEM141Q96I45 108 aa3.46□□□□□ -1.86
SMC4-217ENST00000485867 C20orf78Q9BR46 151 aa3.46□□□□□ -1.86
SMC4-217ENST00000485867 SMIM2Q9BVW6 85 aa3.46□□□□□ -1.86
SMC4-217ENST00000485867 GEMIN7Q9H840 131 aaKnown RBP3.46□□□□□ -1.86
SMC4-217ENST00000485867 TRBV24-1A0A075B6N3 115 aa3.45□□□□□ -1.86
SMC4-217ENST00000485867 HIGD1CA8MV81 97 aa3.45□□□□□ -1.86
SMC4-217ENST00000485867 ARPC5O15511 151 aa3.45□□□□□ -1.86
SMC4-217ENST00000485867 IFI27P40305 119 aaPredicted RBP3.45□□□□□ -1.86
SMC4-217ENST00000485867 MOBPQ13875 183 aa3.45□□□□□ -1.86
SMC4-217ENST00000485867 TEX43Q6ZNM6 134 aa3.45□□□□□ -1.86
SMC4-217ENST00000485867 LINC00299Q6ZSB3 139 aa3.45□□□□□ -1.86
SMC4-217ENST00000485867 PYGO1Q9Y3Y4 419 aa3.45□□□□□ -1.86
SMC4-217ENST00000485867 VPREB1P12018 145 aa3.44□□□□□ -1.86
SMC4-217ENST00000485867 MRPL51Q4U2R6 128 aaKnown RBP3.44□□□□□ -1.86
SMC4-217ENST00000485867 LINC00483Q53H64 154 aa3.44□□□□□ -1.86
SMC4-217ENST00000485867 FAM231DQ6ZW35 169 aa3.44□□□□□ -1.86
SMC4-217ENST00000485867 C2orf88Q9BSF0 95 aa3.44□□□□□ -1.86
SMC4-217ENST00000485867 EIF5A2Q9GZV4 153 aaKnown RBP3.44□□□□□ -1.86
SMC4-217ENST00000485867 KIAA1644Q3SXP7 199 aa3.43□□□□□ -1.86
SMC4-217ENST00000485867 LCE3AQ5TA76 89 aa3.43□□□□□ -1.86
SMC4-217ENST00000485867 FAM104BQ5XKR9 115 aa3.43□□□□□ -1.86
SMC4-217ENST00000485867 SSBP3-AS1Q7Z2R9 100 aa3.43□□□□□ -1.86
SMC4-217ENST00000485867 LINC01551Q86U37 167 aa3.43□□□□□ -1.86
SMC4-217ENST00000485867 RPS10P5Q9NQ39 176 aa3.43□□□□□ -1.86
SMC4-217ENST00000485867 CDKN2A-AS1Q9UH64 79 aa3.43□□□□□ -1.86
SMC4-217ENST00000485867 IGLV9-49A0A0B4J1Y8 123 aa3.42□□□□□ -1.86
SMC4-217ENST00000485867 LINC00862A6NCI5 91 aa3.42□□□□□ -1.86
SMC4-217ENST00000485867 MT2AP02795 61 aa3.42□□□□□ -1.86
SMC4-217ENST00000485867 RAB5BP61020 215 aa3.42□□□□□ -1.86
SMC4-217ENST00000485867 RIGQ13278 110 aa3.42□□□□□ -1.86
SMC4-217ENST00000485867 KRTAP20-1Q3LI63 56 aa3.42□□□□□ -1.86
SMC4-217ENST00000485867 KRTAP19-6Q3LI70 58 aa3.42□□□□□ -1.86
SMC4-217ENST00000485867 Q75L30 129 aa3.42□□□□□ -1.86
SMC4-217ENST00000485867 FAM19A3Q7Z5A8 133 aa3.42□□□□□ -1.86
SMC4-217ENST00000485867 AMELXQ99217 191 aa3.42□□□□□ -1.86
SMC4-217ENST00000485867 LINC00846Q9NV44 126 aa3.42□□□□□ -1.86
SMC4-217ENST00000485867 CKS2P33552 79 aa3.41□□□□□ -1.86
SMC4-217ENST00000485867 RPL37P61927 97 aaKnown RBP3.41□□□□□ -1.86
SMC4-217ENST00000485867 Q6Q795 121 aa3.41□□□□□ -1.86
SMC4-217ENST00000485867 C2orf66Q6UXQ4 117 aa3.41□□□□□ -1.86
SMC4-217ENST00000485867 Q8NDZ9 215 aa3.41□□□□□ -1.86
SMC4-217ENST00000485867 SMCR5Q8TEV8 140 aa3.41□□□□□ -1.86
SMC4-217ENST00000485867 TEX46H3BTG2 121 aa3.4□□□□□ -1.87
SMC4-217ENST00000485867 NPYP01303 97 aa3.4□□□□□ -1.87
SMC4-217ENST00000485867 IGLV6-57P01721 117 aa3.4□□□□□ -1.87
SMC4-217ENST00000485867 MT1FP04733 61 aa3.4□□□□□ -1.87
SMC4-217ENST00000485867 HERVK_113P63121 156 aa3.4□□□□□ -1.87
SMC4-217ENST00000485867 ZNF345Q14585 488 aa3.4□□□□□ -1.87
SMC4-217ENST00000485867 ADAMTSL4-AS1Q5T5F5 129 aa3.4□□□□□ -1.87
SMC4-217ENST00000485867 GAGE2AQ6NT46 116 aa3.4□□□□□ -1.87
SMC4-217ENST00000485867 AKAP14Q86UN6 197 aa3.4□□□□□ -1.87
SMC4-217ENST00000485867 COX7B2Q8TF08 81 aa3.4□□□□□ -1.87
SMC4-217ENST00000485867 SND1-IT1Q9HBX3 110 aa3.4□□□□□ -1.87
SMC4-217ENST00000485867 MUC12Q9UKN1 5478 aa3.4□□□□□ -1.87
SMC4-217ENST00000485867 D6R8Y8 96 aa3.39□□□□□ -1.87
SMC4-217ENST00000485867 RAB5AP20339 215 aa3.39□□□□□ -1.87
SMC4-217ENST00000485867 SEC11AP67812 179 aa3.39□□□□□ -1.87
SMC4-217ENST00000485867 TIMM17AQ99595 171 aa3.39□□□□□ -1.87
SMC4-217ENST00000485867 VCX2Q9H322 139 aa3.39□□□□□ -1.87
SMC4-217ENST00000485867 KRTAP12-2P59991 146 aa3.38□□□□□ -1.87
SMC4-217ENST00000485867 PDZD11Q5EBL8 140 aa3.38□□□□□ -1.87
SMC4-217ENST00000485867 CYSLTR1Q9Y271 337 aa3.38□□□□□ -1.87
SMC4-217ENST00000485867 KANTRA0A1W2PQU2 76 aa3.37□□□□□ -1.87
SMC4-217ENST00000485867 SMLR1H3BR10 107 aa3.37□□□□□ -1.87
SMC4-217ENST00000485867 PFN2P35080 140 aa3.37□□□□□ -1.87
SMC4-217ENST00000485867 SPRR1AP35321 89 aa3.37□□□□□ -1.87
SMC4-217ENST00000485867 TAGLN2P37802 199 aaKnown RBP3.37□□□□□ -1.87
SMC4-217ENST00000485867 RAB14P61106 215 aa3.37□□□□□ -1.87
SMC4-217ENST00000485867 OSTCQ9NRP0 149 aa3.37□□□□□ -1.87
SMC4-217ENST00000485867 NDUFA13Q9P0J0 144 aa3.37□□□□□ -1.87
SMC4-217ENST00000485867 V9GYV3 84 aa3.37□□□□□ -1.87
SMC4-217ENST00000485867 LOC389332A0A1B0GUA5 103 aa3.36□□□□□ -1.87
SMC4-217ENST00000485867 IGIPA6NJ69 53 aa3.36□□□□□ -1.87
SMC4-217ENST00000485867 TMEM250H0YL14 139 aa3.36□□□□□ -1.87
SMC4-217ENST00000485867 ATP5LO75964 103 aa3.36□□□□□ -1.87
SMC4-217ENST00000485867 ERC2-IT1O76042 136 aa3.36□□□□□ -1.87
SMC4-217ENST00000485867 C9orf153Q5TBE3 101 aa3.36□□□□□ -1.87
SMC4-217ENST00000485867 LIMD2Q9BT23 127 aa3.36□□□□□ -1.87
SMC4-217ENST00000485867 ETDCA0A1B0GVM5 59 aa3.35□□□□□ -1.87
SMC4-217ENST00000485867 PPBPP02775 128 aa3.35□□□□□ -1.87
SMC4-217ENST00000485867 SPINK8P0C7L1 97 aa3.35□□□□□ -1.87
SMC4-217ENST00000485867 FAM74A3Q4VXF1 159 aa3.35□□□□□ -1.87
SMC4-217ENST00000485867 NAT8BQ9UHF3 227 aa3.35□□□□□ -1.87
SMC4-217ENST00000485867 A0A1B0GW15 77 aa3.34□□□□□ -1.87
SMC4-217ENST00000485867 KRTAP10-10P60014 251 aa3.34□□□□□ -1.87
SMC4-217ENST00000485867 ORMDL3Q8N138 153 aa3.34□□□□□ -1.87
SMC4-217ENST00000485867 PRAC1Q96KF2 57 aa3.34□□□□□ -1.87
SMC4-217ENST00000485867 KCNQ1DNQ9H478 68 aa3.34□□□□□ -1.87
SMC4-217ENST00000485867 ERG28Q9UKR5 140 aa3.34□□□□□ -1.87
SMC4-217ENST00000485867 TINCRA0A1B0GVN0 87 aa3.33□□□□□ -1.88
SMC4-217ENST00000485867 HMSDA8MTL9 139 aa3.33□□□□□ -1.88
SMC4-217ENST00000485867 F8W036 122 aa3.33□□□□□ -1.88
SMC4-217ENST00000485867 CEBPGP53567 150 aa3.33□□□□□ -1.88
SMC4-217ENST00000485867 PRELID3AQ96N28 172 aa3.33□□□□□ -1.88
SMC4-217ENST00000485867 SMIM7Q9BQ49 75 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms