RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 ERG28Q9UKR5 140 aa7.83□□□□□ -1.16
UBA3-210ENST00000485424 LINC00614P0C842 121 aa7.82□□□□□ -1.16
UBA3-210ENST00000485424 ZNF22P17026 224 aaPredicted RBP7.82□□□□□ -1.16
UBA3-210ENST00000485424 TMEM170BQ5T4T1 132 aa7.82□□□□□ -1.16
UBA3-210ENST00000485424 SFTA2Q6UW10 78 aa7.82□□□□□ -1.16
UBA3-210ENST00000485424 FAM19A1Q7Z5A9 133 aa7.82□□□□□ -1.16
UBA3-210ENST00000485424 IFITM2Q01629 132 aa7.81□□□□□ -1.16
UBA3-210ENST00000485424 COX17Q14061 63 aa7.81□□□□□ -1.16
UBA3-210ENST00000485424 ZNF625Q96I27 306 aaPredicted RBP7.81□□□□□ -1.16
UBA3-210ENST00000485424 IGKV2D-26A0A0A0MRZ7 120 aa7.8□□□□□ -1.16
UBA3-210ENST00000485424 A0A0U1RQV1 116 aa7.8□□□□□ -1.16
UBA3-210ENST00000485424 SCO1O75880 301 aa7.8□□□□□ -1.16
UBA3-210ENST00000485424 C18orf32Q8TCD1 76 aa7.8□□□□□ -1.16
UBA3-210ENST00000485424 SND1-IT1Q9HBX3 110 aa7.8□□□□□ -1.16
UBA3-210ENST00000485424 ANAPC11Q9NYG5 84 aa7.8□□□□□ -1.16
UBA3-210ENST00000485424 IGLV5-39A0A0G2JS06 123 aa7.79□□□□□ -1.16
UBA3-210ENST00000485424 PRLHP81277 87 aa7.79□□□□□ -1.16
UBA3-210ENST00000485424 PMCHL1Q16048 86 aa7.79□□□□□ -1.16
UBA3-210ENST00000485424 FAM229BQ4G0N7 80 aa7.79□□□□□ -1.16
UBA3-210ENST00000485424 BAGE3Q86Y29 109 aa7.79□□□□□ -1.16
UBA3-210ENST00000485424 FAT4Q6V0I7 4981 aa7.78□□□□□ -1.16
UBA3-210ENST00000485424 KRTAP9-7A8MTY7 169 aa7.78□□□□□ -1.16
UBA3-210ENST00000485424 ATP6V1G1O75348 118 aa7.78□□□□□ -1.16
UBA3-210ENST00000485424 VPREB1P12018 145 aa7.78□□□□□ -1.16
UBA3-210ENST00000485424 LINC00158P58513 81 aa7.78□□□□□ -1.16
UBA3-210ENST00000485424 LINC00304Q8N9R0 145 aa7.78□□□□□ -1.16
UBA3-210ENST00000485424 TMEM126AQ9H061 195 aa7.78□□□□□ -1.16
UBA3-210ENST00000485424 A0A096LNJ9 63 aa7.77□□□□□ -1.17
UBA3-210ENST00000485424 NDUFA5Q16718 116 aa7.77□□□□□ -1.17
UBA3-210ENST00000485424 C10orf91Q5T1B1 145 aa7.77□□□□□ -1.17
UBA3-210ENST00000485424 KRTAP13-1Q8IUC0 172 aa7.77□□□□□ -1.17
UBA3-210ENST00000485424 C11orf86A6NJI1 115 aa7.76□□□□□ -1.17
UBA3-210ENST00000485424 TMEM238C9JI98 176 aa7.76□□□□□ -1.17
UBA3-210ENST00000485424 CHTOPQ9Y3Y2 248 aaKnown RBP7.76□□□□□ -1.17
UBA3-210ENST00000485424 APOC3P02656 99 aa7.75□□□□□ -1.17
UBA3-210ENST00000485424 KRTAP13-2Q52LG2 175 aa7.75□□□□□ -1.17
UBA3-210ENST00000485424 LCE5AQ5TCM9 118 aa7.75□□□□□ -1.17
UBA3-210ENST00000485424 CBLN2Q8IUK8 224 aa7.75□□□□□ -1.17
UBA3-210ENST00000485424 URB1-AS1Q96HZ7 61 aa7.75□□□□□ -1.17
UBA3-210ENST00000485424 SNAPINO95295 136 aa7.74□□□□□ -1.17
UBA3-210ENST00000485424 HIGD2AQ9BW72 106 aa7.74□□□□□ -1.17
UBA3-210ENST00000485424 A0A0U1RRA0 63 aa7.73□□□□□ -1.17
UBA3-210ENST00000485424 M0R378 163 aa7.73□□□□□ -1.17
UBA3-210ENST00000485424 MEIG1Q5JSS6 88 aa7.73□□□□□ -1.17
UBA3-210ENST00000485424 RETNLBQ9BQ08 111 aa7.73□□□□□ -1.17
UBA3-210ENST00000485424 SVBPQ8N300 66 aa7.72□□□□□ -1.17
UBA3-210ENST00000485424 IFI27L1Q96BM0 104 aa7.71□□□□□ -1.18
UBA3-210ENST00000485424 CHCHD1Q96BP2 118 aaKnown RBP7.71□□□□□ -1.18
UBA3-210ENST00000485424 CDIP1Q9H305 208 aa7.71□□□□□ -1.18
UBA3-210ENST00000485424 ZNF706Q9Y5V0 76 aaPredicted RBP7.71□□□□□ -1.18
UBA3-210ENST00000485424 TMEM223A0PJW6 202 aa7.7□□□□□ -1.18
UBA3-210ENST00000485424 S100A12P80511 92 aa7.7□□□□□ -1.18
UBA3-210ENST00000485424 PLEKHB2Q96CS7 222 aa7.7□□□□□ -1.18
UBA3-210ENST00000485424 TRAV12-1A0A0B4J245 112 aa7.69□□□□□ -1.18
UBA3-210ENST00000485424 LINC00587B1AMM8 73 aa7.69□□□□□ -1.18
UBA3-210ENST00000485424 CTAG1AP78358 180 aa7.69□□□□□ -1.18
UBA3-210ENST00000485424 MUC17Q685J3 4493 aa7.69□□□□□ -1.18
UBA3-210ENST00000485424 SMIM13P0DJ93 91 aa7.68□□□□□ -1.18
UBA3-210ENST00000485424 HERV-K104P63124 156 aa7.68□□□□□ -1.18
UBA3-210ENST00000485424 KRTAP19-4Q3LI73 84 aa7.68□□□□□ -1.18
UBA3-210ENST00000485424 BOD1L2Q8IYS8 172 aa7.68□□□□□ -1.18
UBA3-210ENST00000485424 Q8NDZ9 215 aa7.68□□□□□ -1.18
UBA3-210ENST00000485424 MAP1LC3CQ9BXW4 147 aa7.68□□□□□ -1.18
UBA3-210ENST00000485424 IGLV7-46A0A075B6I9 117 aa7.67□□□□□ -1.18
UBA3-210ENST00000485424 H0Y8G0 127 aa7.67□□□□□ -1.18
UBA3-210ENST00000485424 PRYO14603 147 aa7.67□□□□□ -1.18
UBA3-210ENST00000485424 NCR3O14931 201 aa7.67□□□□□ -1.18
UBA3-210ENST00000485424 HSBP1O75506 76 aa7.67□□□□□ -1.18
UBA3-210ENST00000485424 SPAG11AQ6PDA7 123 aa7.67□□□□□ -1.18
UBA3-210ENST00000485424 C3orf22Q8N5N4 141 aa7.67□□□□□ -1.18
UBA3-210ENST00000485424 ETDCA0A1B0GVM5 59 aa7.66□□□□□ -1.18
UBA3-210ENST00000485424 MIR7-3HGQ8N6C7 128 aa7.66□□□□□ -1.18
UBA3-210ENST00000485424 MYMXA0A1B0GTQ4 84 aa7.65□□□□□ -1.18
UBA3-210ENST00000485424 TPRXLQ17RH7 258 aa7.65□□□□□ -1.18
UBA3-210ENST00000485424 SPRR4Q96PI1 79 aa7.65□□□□□ -1.18
UBA3-210ENST00000485424 NDUFA12Q9UI09 145 aa7.64□□□□□ -1.19
UBA3-210ENST00000485424 FAM19A2Q8N3H0 131 aa7.63□□□□□ -1.19
UBA3-210ENST00000485424 LINC00337Q8N6G1 96 aa7.63□□□□□ -1.19
UBA3-210ENST00000485424 SMCR5Q8TEV8 140 aa7.62□□□□□ -1.19
UBA3-210ENST00000485424 MIEN1Q9BRT3 115 aa7.62□□□□□ -1.19
UBA3-210ENST00000485424 PPDPFQ9H3Y8 114 aa7.62□□□□□ -1.19
UBA3-210ENST00000485424 HERVK_113P61574 105 aa7.61□□□□□ -1.19
UBA3-210ENST00000485424 KCNQ1DNQ9H478 68 aa7.61□□□□□ -1.19
UBA3-210ENST00000485424 TRBV10-3A0A0K0K1G6 114 aa7.6□□□□□ -1.19
UBA3-210ENST00000485424 LEPROTL1O95214 131 aa7.6□□□□□ -1.19
UBA3-210ENST00000485424 Q8NBF4 154 aa7.6□□□□□ -1.19
UBA3-210ENST00000485424 LEPROTO15243 131 aa7.59□□□□□ -1.19
UBA3-210ENST00000485424 PLNP26678 52 aa7.59□□□□□ -1.19
UBA3-210ENST00000485424 SPRR1AP35321 89 aa7.59□□□□□ -1.19
UBA3-210ENST00000485424 FP248Q71RG6 208 aaPredicted RBP7.59□□□□□ -1.19
UBA3-210ENST00000485424 DAND5Q8N907 189 aa7.59□□□□□ -1.19
UBA3-210ENST00000485424 LGALS3P17931 250 aaKnown RBP7.58□□□□□ -1.2
UBA3-210ENST00000485424 DDTP30046 118 aa7.58□□□□□ -1.2
UBA3-210ENST00000485424 GAGE2AQ6NT46 116 aa7.58□□□□□ -1.2
UBA3-210ENST00000485424 YPEL4Q96NS1 127 aa7.58□□□□□ -1.2
UBA3-210ENST00000485424 HSPB8Q9UJY1 196 aa7.58□□□□□ -1.2
UBA3-210ENST00000485424 TRGC2P03986 189 aa7.57□□□□□ -1.2
UBA3-210ENST00000485424 S100A7L2Q5SY68 101 aa7.57□□□□□ -1.2
UBA3-210ENST00000485424 KRTAP9-3Q9BYQ3 159 aa7.57□□□□□ -1.2
UBA3-210ENST00000485424 IGLV9-49A0A0B4J1Y8 123 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms