RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 SPINK8P0C7L1 97 aa9.1□□□□□ -0.95
HLA-DQB1-208ENST00000484729 ZNF22P17026 224 aaPredicted RBP9.1□□□□□ -0.95
HLA-DQB1-208ENST00000484729 TMEM170BQ5T4T1 132 aa9.1□□□□□ -0.95
HLA-DQB1-208ENST00000484729 MRPL55Q7Z7F7 128 aaKnown RBP9.1□□□□□ -0.95
HLA-DQB1-208ENST00000484729 SMIM1B2RUZ4 78 aa9.09□□□□□ -0.95
HLA-DQB1-208ENST00000484729 TSPAN13O95857 204 aa9.09□□□□□ -0.95
HLA-DQB1-208ENST00000484729 S100A6P06703 90 aa9.09□□□□□ -0.95
HLA-DQB1-208ENST00000484729 TP73-AS1Q9UF72 201 aa9.09□□□□□ -0.95
HLA-DQB1-208ENST00000484729 RPL28P46779 137 aaKnown RBP9.08□□□□□ -0.96
HLA-DQB1-208ENST00000484729 BCE1O60756 84 aa9.07□□□□□ -0.96
HLA-DQB1-208ENST00000484729 COX7B2Q8TF08 81 aa9.07□□□□□ -0.96
HLA-DQB1-208ENST00000484729 RPL37AP8A6NKH3 93 aa9.06□□□□□ -0.96
HLA-DQB1-208ENST00000484729 PLNP26678 52 aa9.06□□□□□ -0.96
HLA-DQB1-208ENST00000484729 GAGE10A6NGK3 116 aa9.05□□□□□ -0.96
HLA-DQB1-208ENST00000484729 S100A2P29034 98 aa9.05□□□□□ -0.96
HLA-DQB1-208ENST00000484729 LINC00167Q96N53 147 aa9.05□□□□□ -0.96
HLA-DQB1-208ENST00000484729 PMCHL2Q9BQD1 86 aa9.05□□□□□ -0.96
HLA-DQB1-208ENST00000484729 SYS1-DBNDD2H3BUS1 97 aa9.04□□□□□ -0.96
HLA-DQB1-208ENST00000484729 DPM2O94777 84 aa9.04□□□□□ -0.96
HLA-DQB1-208ENST00000484729 KRTDAPP60985 99 aa9.04□□□□□ -0.96
HLA-DQB1-208ENST00000484729 A0A087X002 238 aa9.03□□□□□ -0.96
HLA-DQB1-208ENST00000484729 NKAPP1Q8N9T2 125 aa9.03□□□□□ -0.96
HLA-DQB1-208ENST00000484729 IGLV5-39A0A0G2JS06 123 aa9.02□□□□□ -0.97
HLA-DQB1-208ENST00000484729 IGKCP01834 107 aa9.02□□□□□ -0.97
HLA-DQB1-208ENST00000484729 CRYGAP11844 174 aa9.02□□□□□ -0.97
HLA-DQB1-208ENST00000484729 HIST3H2BBQ8N257 126 aa9.02□□□□□ -0.97
HLA-DQB1-208ENST00000484729 TYMSOSQ8TAI1 123 aa9.02□□□□□ -0.97
HLA-DQB1-208ENST00000484729 TMEM223A0PJW6 202 aa9.01□□□□□ -0.97
HLA-DQB1-208ENST00000484729 C3orf79P0CE67 100 aa9.01□□□□□ -0.97
HLA-DQB1-208ENST00000484729 UBE2AP49459 152 aa9.01□□□□□ -0.97
HLA-DQB1-208ENST00000484729 PET117Q6UWS5 81 aa9.01□□□□□ -0.97
HLA-DQB1-208ENST00000484729 C20orf202A1L168 122 aa9□□□□□ -0.97
HLA-DQB1-208ENST00000484729 HERVK_113P61574 105 aa9□□□□□ -0.97
HLA-DQB1-208ENST00000484729 IGLV5-37A0A075B6J1 123 aa8.99□□□□□ -0.97
HLA-DQB1-208ENST00000484729 SNRPEP62304 92 aaKnown RBP8.99□□□□□ -0.97
HLA-DQB1-208ENST00000484729 LINC01545Q5VT33 79 aa8.99□□□□□ -0.97
HLA-DQB1-208ENST00000484729 ANAPC11Q9NYG5 84 aa8.99□□□□□ -0.97
HLA-DQB1-208ENST00000484729 HIST1H2BLQ99880 126 aa8.98□□□□□ -0.97
HLA-DQB1-208ENST00000484729 IGKV2-28A0A075B6P5 120 aa8.97□□□□□ -0.97
HLA-DQB1-208ENST00000484729 IGKV2D-28P01615 120 aa8.97□□□□□ -0.97
HLA-DQB1-208ENST00000484729 PFN2P35080 140 aa8.97□□□□□ -0.97
HLA-DQB1-208ENST00000484729 SFTA2Q6UW10 78 aa8.96□□□□□ -0.98
HLA-DQB1-208ENST00000484729 KRTAP13-1Q8IUC0 172 aa8.96□□□□□ -0.98
HLA-DQB1-208ENST00000484729 PLEKHB2Q96CS7 222 aa8.95□□□□□ -0.98
HLA-DQB1-208ENST00000484729 RETNLBQ9BQ08 111 aa8.95□□□□□ -0.98
HLA-DQB1-208ENST00000484729 TMA7Q9Y2S6 64 aaKnown RBP8.95□□□□□ -0.98
HLA-DQB1-208ENST00000484729 C5orf52A6NGY3 159 aa8.94□□□□□ -0.98
HLA-DQB1-208ENST00000484729 LEPROTO15243 131 aa8.94□□□□□ -0.98
HLA-DQB1-208ENST00000484729 KRTAP13-2Q52LG2 175 aa8.94□□□□□ -0.98
HLA-DQB1-208ENST00000484729 LGALS3P17931 250 aaKnown RBP8.93□□□□□ -0.98
HLA-DQB1-208ENST00000484729 PRLHP81277 87 aa8.93□□□□□ -0.98
HLA-DQB1-208ENST00000484729 ZNF625Q96I27 306 aaPredicted RBP8.93□□□□□ -0.98
HLA-DQB1-208ENST00000484729 ERG28Q9UKR5 140 aa8.93□□□□□ -0.98
HLA-DQB1-208ENST00000484729 VPREB1P12018 145 aa8.92□□□□□ -0.98
HLA-DQB1-208ENST00000484729 AKR1D1P51857 326 aa8.92□□□□□ -0.98
HLA-DQB1-208ENST00000484729 TSPEAR-AS2P59090 65 aa8.92□□□□□ -0.98
HLA-DQB1-208ENST00000484729 FAM19A1Q7Z5A9 133 aa8.92□□□□□ -0.98
HLA-DQB1-208ENST00000484729 SND1-IT1Q9HBX3 110 aa8.92□□□□□ -0.98
HLA-DQB1-208ENST00000484729 NDUFA12Q9UI09 145 aa8.92□□□□□ -0.98
HLA-DQB1-208ENST00000484729 MYMXA0A1B0GTQ4 84 aa8.91□□□□□ -0.98
HLA-DQB1-208ENST00000484729 TMEM238C9JI98 176 aa8.91□□□□□ -0.98
HLA-DQB1-208ENST00000484729 J3QQQ9 107 aa8.91□□□□□ -0.98
HLA-DQB1-208ENST00000484729 FAM229BQ4G0N7 80 aa8.91□□□□□ -0.98
HLA-DQB1-208ENST00000484729 ATOH7Q8N100 152 aa8.91□□□□□ -0.98
HLA-DQB1-208ENST00000484729 LINC00304Q8N9R0 145 aa8.91□□□□□ -0.98
HLA-DQB1-208ENST00000484729 TMEM126AQ9H061 195 aa8.91□□□□□ -0.98
HLA-DQB1-208ENST00000484729 CDIP1Q9H305 208 aa8.91□□□□□ -0.98
HLA-DQB1-208ENST00000484729 IGKV2D-26A0A0A0MRZ7 120 aa8.9□□□□□ -0.98
HLA-DQB1-208ENST00000484729 E9PLD3 99 aa8.9□□□□□ -0.98
HLA-DQB1-208ENST00000484729 HERV-K104P63124 156 aa8.9□□□□□ -0.98
HLA-DQB1-208ENST00000484729 RPL24P83731 157 aaKnown RBP8.9□□□□□ -0.98
HLA-DQB1-208ENST00000484729 MEIG1Q5JSS6 88 aa8.9□□□□□ -0.98
HLA-DQB1-208ENST00000484729 CRCT1Q9UGL9 99 aa8.9□□□□□ -0.98
HLA-DQB1-208ENST00000484729 NMUP48645 174 aa8.89□□□□□ -0.99
HLA-DQB1-208ENST00000484729 LCE2DQ5TA82 110 aaPredicted RBP8.89□□□□□ -0.99
HLA-DQB1-208ENST00000484729 LINC00158P58513 81 aa8.88□□□□□ -0.99
HLA-DQB1-208ENST00000484729 COX17Q14061 63 aa8.88□□□□□ -0.99
HLA-DQB1-208ENST00000484729 FSIP2Q5CZC0 6907 aa8.88□□□□□ -0.99
HLA-DQB1-208ENST00000484729 A0A0U1RRA0 63 aa8.87□□□□□ -0.99
HLA-DQB1-208ENST00000484729 M0R378 163 aa8.87□□□□□ -0.99
HLA-DQB1-208ENST00000484729 SCGB1D1O95968 90 aa8.87□□□□□ -0.99
HLA-DQB1-208ENST00000484729 MUC17Q685J3 4493 aa8.86□□□□□ -0.99
HLA-DQB1-208ENST00000484729 Q8NDZ9 215 aa8.86□□□□□ -0.99
HLA-DQB1-208ENST00000484729 LINC00587B1AMM8 73 aa8.85□□□□□ -0.99
HLA-DQB1-208ENST00000484729 SMIM13P0DJ93 91 aa8.85□□□□□ -0.99
HLA-DQB1-208ENST00000484729 TPRXLQ17RH7 258 aa8.85□□□□□ -0.99
HLA-DQB1-208ENST00000484729 HIGD2AQ9BW72 106 aa8.85□□□□□ -0.99
HLA-DQB1-208ENST00000484729 HSBP1L1C9JCN9 74 aa8.84□□□□□ -0.99
HLA-DQB1-208ENST00000484729 IGLV7-46A0A075B6I9 117 aa8.83□□□□□ -1
HLA-DQB1-208ENST00000484729 ZNF815PA8K554 130 aa8.83□□□□□ -1
HLA-DQB1-208ENST00000484729 ANKRD39Q53RE8 183 aa8.83□□□□□ -1
HLA-DQB1-208ENST00000484729 C3orf22Q8N5N4 141 aa8.82□□□□□ -1
HLA-DQB1-208ENST00000484729 MIR7-3HGQ8N6C7 128 aa8.82□□□□□ -1
HLA-DQB1-208ENST00000484729 A0A0J9YXY3 114 aa8.81□□□□□ -1
HLA-DQB1-208ENST00000484729 TTTY13Q9BZ97 58 aa8.8□□□□□ -1
HLA-DQB1-208ENST00000484729 DAND5Q8N907 189 aa8.79□□□□□ -1
HLA-DQB1-208ENST00000484729 LINC01547P58512 204 aaPredicted RBP8.78□□□□□ -1
HLA-DQB1-208ENST00000484729 CTAG1AP78358 180 aa8.78□□□□□ -1
HLA-DQB1-208ENST00000484729 SCGB1D4Q6XE38 83 aa8.78□□□□□ -1
HLA-DQB1-208ENST00000484729 SPRR4Q96PI1 79 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms