RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 UBR4Q5T4S7 5183 aa7.37□□□□□ -1.23
MSH5-216ENST00000484309 SFTA2Q6UW10 78 aa7.37□□□□□ -1.23
MSH5-216ENST00000484309 PMCHL2Q9BQD1 86 aa7.37□□□□□ -1.23
MSH5-216ENST00000484309 ATP6V1G1O75348 118 aa7.36□□□□□ -1.23
MSH5-216ENST00000484309 SMIM13P0DJ93 91 aa7.36□□□□□ -1.23
MSH5-216ENST00000484309 RPL28P46779 137 aaKnown RBP7.36□□□□□ -1.23
MSH5-216ENST00000484309 MEIG1Q5JSS6 88 aa7.36□□□□□ -1.23
MSH5-216ENST00000484309 UBE2AP49459 152 aa7.35□□□□□ -1.23
MSH5-216ENST00000484309 TSPEAR-AS2P59090 65 aa7.35□□□□□ -1.23
MSH5-216ENST00000484309 RPL24P83731 157 aaKnown RBP7.35□□□□□ -1.23
MSH5-216ENST00000484309 HSPB8Q9UJY1 196 aa7.35□□□□□ -1.23
MSH5-216ENST00000484309 IGLV1-50A0A075B6I6 118 aa7.34□□□□□ -1.23
MSH5-216ENST00000484309 TMEM238C9JI98 176 aa7.34□□□□□ -1.23
MSH5-216ENST00000484309 NDUFA12Q9UI09 145 aa7.34□□□□□ -1.23
MSH5-216ENST00000484309 HIST1H2BKO60814 126 aa7.33□□□□□ -1.24
MSH5-216ENST00000484309 DPM2O94777 84 aa7.33□□□□□ -1.24
MSH5-216ENST00000484309 HIST1H2BJP06899 126 aa7.33□□□□□ -1.24
MSH5-216ENST00000484309 HIST1H2BOP23527 126 aa7.33□□□□□ -1.24
MSH5-216ENST00000484309 HIST1H2BBP33778 126 aa7.33□□□□□ -1.24
MSH5-216ENST00000484309 HIST1H2BDP58876 126 aa7.33□□□□□ -1.24
MSH5-216ENST00000484309 HIST1H2BCP62807 126 aa7.33□□□□□ -1.24
MSH5-216ENST00000484309 PRLHP81277 87 aa7.33□□□□□ -1.24
MSH5-216ENST00000484309 HIST2H2BEQ16778 126 aa7.33□□□□□ -1.24
MSH5-216ENST00000484309 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.33□□□□□ -1.24
MSH5-216ENST00000484309 MIR7-3HGQ8N6C7 128 aa7.33□□□□□ -1.24
MSH5-216ENST00000484309 HIST1H2BHQ93079 126 aa7.33□□□□□ -1.24
MSH5-216ENST00000484309 HIST1H2BNQ99877 126 aa7.33□□□□□ -1.24
MSH5-216ENST00000484309 HIST1H2BMQ99879 126 aa7.33□□□□□ -1.24
MSH5-216ENST00000484309 LEPROTO15243 131 aa7.32□□□□□ -1.24
MSH5-216ENST00000484309 PLNP26678 52 aa7.32□□□□□ -1.24
MSH5-216ENST00000484309 FAM19A1Q7Z5A9 133 aa7.32□□□□□ -1.24
MSH5-216ENST00000484309 TMEM126AQ9H061 195 aa7.32□□□□□ -1.24
MSH5-216ENST00000484309 MYMXA0A1B0GTQ4 84 aa7.31□□□□□ -1.24
MSH5-216ENST00000484309 IGKCP01834 107 aa7.31□□□□□ -1.24
MSH5-216ENST00000484309 HERV-K104P63124 156 aa7.31□□□□□ -1.24
MSH5-216ENST00000484309 KRTAP13-1Q8IUC0 172 aa7.31□□□□□ -1.24
MSH5-216ENST00000484309 BOD1L2Q8IYS8 172 aa7.31□□□□□ -1.24
MSH5-216ENST00000484309 MAP1LC3CQ9BXW4 147 aa7.31□□□□□ -1.24
MSH5-216ENST00000484309 ANAPC11Q9NYG5 84 aa7.31□□□□□ -1.24
MSH5-216ENST00000484309 A0A087X002 238 aa7.3□□□□□ -1.24
MSH5-216ENST00000484309 M0R378 163 aa7.3□□□□□ -1.24
MSH5-216ENST00000484309 NCR3O14931 201 aa7.3□□□□□ -1.24
MSH5-216ENST00000484309 DAND5Q8N907 189 aa7.3□□□□□ -1.24
MSH5-216ENST00000484309 PLEKHB2Q96CS7 222 aa7.3□□□□□ -1.24
MSH5-216ENST00000484309 J3QQQ9 107 aa7.29□□□□□ -1.24
MSH5-216ENST00000484309 RPL13AP40429 203 aaKnown RBP7.29□□□□□ -1.24
MSH5-216ENST00000484309 HERVK_113P61574 105 aa7.29□□□□□ -1.24
MSH5-216ENST00000484309 LGALS3P17931 250 aaKnown RBP7.28□□□□□ -1.24
MSH5-216ENST00000484309 LRP2P98164 4655 aa7.27□□□□□ -1.25
MSH5-216ENST00000484309 SYS1-DBNDD2H3BUS1 97 aa7.27□□□□□ -1.25
MSH5-216ENST00000484309 LINC00587B1AMM8 73 aa7.26□□□□□ -1.25
MSH5-216ENST00000484309 CRYGAP11844 174 aa7.26□□□□□ -1.25
MSH5-216ENST00000484309 HIGD2AQ9BW72 106 aa7.25□□□□□ -1.25
MSH5-216ENST00000484309 TRBV10-3A0A0K0K1G6 114 aa7.24□□□□□ -1.25
MSH5-216ENST00000484309 LCE2BO14633 110 aa7.24□□□□□ -1.25
MSH5-216ENST00000484309 TSPAN13O95857 204 aa7.24□□□□□ -1.25
MSH5-216ENST00000484309 NMUP48645 174 aa7.24□□□□□ -1.25
MSH5-216ENST00000484309 NPC2P61916 151 aa7.24□□□□□ -1.25
MSH5-216ENST00000484309 KRTAP13-2Q52LG2 175 aa7.24□□□□□ -1.25
MSH5-216ENST00000484309 TYMSOSQ8TAI1 123 aa7.24□□□□□ -1.25
MSH5-216ENST00000484309 PRYO14603 147 aa7.23□□□□□ -1.25
MSH5-216ENST00000484309 A0A0J9YXY3 114 aa7.22□□□□□ -1.25
MSH5-216ENST00000484309 E9PLD3 99 aa7.22□□□□□ -1.25
MSH5-216ENST00000484309 C3orf79P0CE67 100 aa7.22□□□□□ -1.25
MSH5-216ENST00000484309 LINC01545Q5VT33 79 aa7.22□□□□□ -1.25
MSH5-216ENST00000484309 IGKV2D-26A0A0A0MRZ7 120 aa7.21□□□□□ -1.26
MSH5-216ENST00000484309 KRTDAPP60985 99 aa7.21□□□□□ -1.26
MSH5-216ENST00000484309 FAM229BQ4G0N7 80 aa7.21□□□□□ -1.26
MSH5-216ENST00000484309 ADAMTSL4-AS1Q5T5F5 129 aa7.21□□□□□ -1.26
MSH5-216ENST00000484309 PET117Q6UWS5 81 aa7.21□□□□□ -1.26
MSH5-216ENST00000484309 MIEN1Q9BRT3 115 aa7.21□□□□□ -1.26
MSH5-216ENST00000484309 LPAP08519 4548 aa7.2□□□□□ -1.26
MSH5-216ENST00000484309 ETDCA0A1B0GVM5 59 aa7.2□□□□□ -1.26
MSH5-216ENST00000484309 EIF4EBP3O60516 100 aaPredicted RBP7.2□□□□□ -1.26
MSH5-216ENST00000484309 S100A1P23297 94 aa7.2□□□□□ -1.26
MSH5-216ENST00000484309 PRR4Q16378 134 aa7.2□□□□□ -1.26
MSH5-216ENST00000484309 SOSTDC1Q6X4U4 206 aa7.2□□□□□ -1.26
MSH5-216ENST00000484309 TTTY13Q9BZ97 58 aa7.2□□□□□ -1.26
MSH5-216ENST00000484309 KCNQ1DNQ9H478 68 aa7.2□□□□□ -1.26
MSH5-216ENST00000484309 LOC107984156A0A0G2JMH3 177 aa7.19□□□□□ -1.26
MSH5-216ENST00000484309 DDTP30046 118 aa7.19□□□□□ -1.26
MSH5-216ENST00000484309 SPRR1AP35321 89 aa7.19□□□□□ -1.26
MSH5-216ENST00000484309 COA6Q5JTJ3 125 aaKnown RBP7.19□□□□□ -1.26
MSH5-216ENST00000484309 ARL17AQ8IVW1 177 aa7.19□□□□□ -1.26
MSH5-216ENST00000484309 C3orf22Q8N5N4 141 aa7.19□□□□□ -1.26
MSH5-216ENST00000484309 KRTAP4-16G5E9R7 235 aaPredicted RBP7.18□□□□□ -1.26
MSH5-216ENST00000484309 LINC00337Q8N6G1 96 aa7.18□□□□□ -1.26
MSH5-216ENST00000484309 SPRR4Q96PI1 79 aa7.18□□□□□ -1.26
MSH5-216ENST00000484309 SPANXB1Q9NS25 103 aaPredicted RBP7.18□□□□□ -1.26
MSH5-216ENST00000484309 TRBV10-2A0A0K0K1G8 114 aa7.17□□□□□ -1.26
MSH5-216ENST00000484309 ZNF815PA8K554 130 aa7.17□□□□□ -1.26
MSH5-216ENST00000484309 S100A12P80511 92 aa7.17□□□□□ -1.26
MSH5-216ENST00000484309 SMCR5Q8TEV8 140 aa7.17□□□□□ -1.26
MSH5-216ENST00000484309 S100A7L2Q5SY68 101 aa7.16□□□□□ -1.26
MSH5-216ENST00000484309 ATOH7Q8N100 152 aa7.16□□□□□ -1.26
MSH5-216ENST00000484309 LINC00304Q8N9R0 145 aa7.16□□□□□ -1.26
MSH5-216ENST00000484309 LITAFQ99732 161 aa7.16□□□□□ -1.26
MSH5-216ENST00000484309 PPDPFQ9H3Y8 114 aa7.16□□□□□ -1.26
MSH5-216ENST00000484309 B5MCH6 92 aa7.15□□□□□ -1.26
MSH5-216ENST00000484309 NDUFC2O95298 119 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms