RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 C2orf48Q96LS8 159 aa3.56□□□□□ -1.84
SEMA3D-204ENST00000484038 ALKBH7Q9BT30 221 aaPredicted RBP3.56□□□□□ -1.84
SEMA3D-204ENST00000484038 KRTAP10-5P60370 271 aa3.55□□□□□ -1.84
SEMA3D-204ENST00000484038 C14orf144Q96I85 54 aa3.55□□□□□ -1.84
SEMA3D-204ENST00000484038 ST20Q9HBF5 79 aa3.55□□□□□ -1.84
SEMA3D-204ENST00000484038 TRBV6-5A0A0K0K1A5 114 aa3.54□□□□□ -1.84
SEMA3D-204ENST00000484038 M0QXV9 152 aa3.54□□□□□ -1.84
SEMA3D-204ENST00000484038 PMCHL1Q16048 86 aa3.54□□□□□ -1.84
SEMA3D-204ENST00000484038 A0A1B0GUT8 65 aa3.54□□□□□ -1.84
SEMA3D-204ENST00000484038 NDUFA1O15239 70 aa3.54□□□□□ -1.84
SEMA3D-204ENST00000484038 HSBP1O75506 76 aa3.54□□□□□ -1.84
SEMA3D-204ENST00000484038 C3orf79P0CE67 100 aa3.54□□□□□ -1.84
SEMA3D-204ENST00000484038 FCER1GP30273 86 aa3.54□□□□□ -1.84
SEMA3D-204ENST00000484038 RIGQ13278 110 aa3.54□□□□□ -1.84
SEMA3D-204ENST00000484038 TEX43Q6ZNM6 134 aa3.54□□□□□ -1.84
SEMA3D-204ENST00000484038 Q6ZUT4 128 aa3.54□□□□□ -1.84
SEMA3D-204ENST00000484038 ATOH7Q8N100 152 aa3.54□□□□□ -1.84
SEMA3D-204ENST00000484038 ORAOV1Q8WV07 137 aa3.54□□□□□ -1.84
SEMA3D-204ENST00000484038 MRPL35Q9NZE8 188 aaKnown RBP3.54□□□□□ -1.84
SEMA3D-204ENST00000484038 TRBV27A0A0K0K1C4 114 aa3.53□□□□□ -1.84
SEMA3D-204ENST00000484038 KRTAP16-1A8MUX0 517 aa3.53□□□□□ -1.84
SEMA3D-204ENST00000484038 SMAGPQ0VAQ4 97 aa3.53□□□□□ -1.84
SEMA3D-204ENST00000484038 LINC00173Q6ZV60 143 aa3.53□□□□□ -1.84
SEMA3D-204ENST00000484038 BORCS7Q96B45 105 aa3.53□□□□□ -1.84
SEMA3D-204ENST00000484038 VAMP8Q9BV40 100 aa3.53□□□□□ -1.84
SEMA3D-204ENST00000484038 UBE2D4Q9Y2X8 147 aa3.53□□□□□ -1.84
SEMA3D-204ENST00000484038 SMKR1H3BMG3 65 aa3.52□□□□□ -1.85
SEMA3D-204ENST00000484038 POLR2KP53803 58 aaKnown RBP3.52□□□□□ -1.85
SEMA3D-204ENST00000484038 UNQ6190/PRO20217Q6UXQ8 127 aa3.52□□□□□ -1.85
SEMA3D-204ENST00000484038 AMN1Q8IY45 258 aa3.52□□□□□ -1.85
SEMA3D-204ENST00000484038 C6orf48Q9UBA6 75 aa3.52□□□□□ -1.85
SEMA3D-204ENST00000484038 CSDC2Q9Y534 153 aaKnown RBP3.52□□□□□ -1.85
SEMA3D-204ENST00000484038 LOC389332A0A1B0GUA5 103 aa3.51□□□□□ -1.85
SEMA3D-204ENST00000484038 A0A1B0GV90 55 aa3.51□□□□□ -1.85
SEMA3D-204ENST00000484038 D6R8Y8 96 aa3.51□□□□□ -1.85
SEMA3D-204ENST00000484038 F8WDY8 70 aa3.51□□□□□ -1.85
SEMA3D-204ENST00000484038 ZNF861PO60384 105 aa3.51□□□□□ -1.85
SEMA3D-204ENST00000484038 TLX1NBP0CAT3 122 aa3.51□□□□□ -1.85
SEMA3D-204ENST00000484038 SPATA45Q537H7 98 aa3.51□□□□□ -1.85
SEMA3D-204ENST00000484038 TYMSOSQ8TAI1 123 aa3.51□□□□□ -1.85
SEMA3D-204ENST00000484038 KIR2DL4Q99706 377 aa3.51□□□□□ -1.85
SEMA3D-204ENST00000484038 RETNLBQ9BQ08 111 aa3.51□□□□□ -1.85
SEMA3D-204ENST00000484038 A0A1B0GW15 77 aa3.5□□□□□ -1.85
SEMA3D-204ENST00000484038 LINC00614P0C842 121 aa3.5□□□□□ -1.85
SEMA3D-204ENST00000484038 MRPL51Q4U2R6 128 aaKnown RBP3.5□□□□□ -1.85
SEMA3D-204ENST00000484038 FAM104BQ5XKR9 115 aa3.5□□□□□ -1.85
SEMA3D-204ENST00000484038 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.5□□□□□ -1.85
SEMA3D-204ENST00000484038 FA2HQ7L5A8 372 aa3.5□□□□□ -1.85
SEMA3D-204ENST00000484038 CHCHD1Q96BP2 118 aaKnown RBP3.5□□□□□ -1.85
SEMA3D-204ENST00000484038 SNHG12Q9BXW3 62 aa3.5□□□□□ -1.85
SEMA3D-204ENST00000484038 TMEM191AQ9H0A3 160 aa3.5□□□□□ -1.85
SEMA3D-204ENST00000484038 IGHV3OR16-9A0A0B4J2B5 98 aa3.49□□□□□ -1.85
SEMA3D-204ENST00000484038 LEPROTL1O95214 131 aa3.49□□□□□ -1.85
SEMA3D-204ENST00000484038 NPYP01303 97 aa3.49□□□□□ -1.85
SEMA3D-204ENST00000484038 CRYGAP11844 174 aa3.49□□□□□ -1.85
SEMA3D-204ENST00000484038 CKS2P33552 79 aa3.49□□□□□ -1.85
SEMA3D-204ENST00000484038 IFI27P40305 119 aaPredicted RBP3.49□□□□□ -1.85
SEMA3D-204ENST00000484038 RPL39P62891 51 aaKnown RBP3.49□□□□□ -1.85
SEMA3D-204ENST00000484038 C9orf129Q5T035 196 aaKnown RBP3.49□□□□□ -1.85
SEMA3D-204ENST00000484038 PRELID3AQ96N28 172 aa3.49□□□□□ -1.85
SEMA3D-204ENST00000484038 PMCHL2Q9BQD1 86 aa3.49□□□□□ -1.85
SEMA3D-204ENST00000484038 MIEN1Q9BRT3 115 aa3.49□□□□□ -1.85
SEMA3D-204ENST00000484038 VCX2Q9H322 139 aa3.49□□□□□ -1.85
SEMA3D-204ENST00000484038 FSIP2Q5CZC0 6907 aa3.49□□□□□ -1.85
SEMA3D-204ENST00000484038 NDUFC2-KCTD14E9PQ53 114 aa3.49□□□□□ -1.85
SEMA3D-204ENST00000484038 SYS1-DBNDD2H3BUS1 97 aa3.49□□□□□ -1.85
SEMA3D-204ENST00000484038 M0R143 59 aa3.49□□□□□ -1.85
SEMA3D-204ENST00000484038 PPP1R17O96001 155 aa3.49□□□□□ -1.85
SEMA3D-204ENST00000484038 BATFQ16520 125 aa3.49□□□□□ -1.85
SEMA3D-204ENST00000484038 C2orf82Q6UX34 121 aa3.49□□□□□ -1.85
SEMA3D-204ENST00000484038 ORMDL3Q8N138 153 aa3.49□□□□□ -1.85
SEMA3D-204ENST00000484038 C2orf88Q9BSF0 95 aa3.49□□□□□ -1.85
SEMA3D-204ENST00000484038 TIMM21Q9BVV7 248 aa3.49□□□□□ -1.85
SEMA3D-204ENST00000484038 TP73-AS1Q9UF72 201 aa3.49□□□□□ -1.85
SEMA3D-204ENST00000484038 A0A096LNJ9 63 aa3.48□□□□□ -1.85
SEMA3D-204ENST00000484038 TRBV30A0A0K0K1B3 111 aa3.48□□□□□ -1.85
SEMA3D-204ENST00000484038 IGLC3P0DOY3 106 aa3.48□□□□□ -1.85
SEMA3D-204ENST00000484038 RPL28P46779 137 aaKnown RBP3.48□□□□□ -1.85
SEMA3D-204ENST00000484038 TPRXLQ17RH7 258 aa3.48□□□□□ -1.85
SEMA3D-204ENST00000484038 Q6ZN92 141 aa3.48□□□□□ -1.85
SEMA3D-204ENST00000484038 MAP1LC3CQ9BXW4 147 aa3.48□□□□□ -1.85
SEMA3D-204ENST00000484038 ANAPC11Q9NYG5 84 aa3.48□□□□□ -1.85
SEMA3D-204ENST00000484038 UQCR10Q9UDW1 63 aa3.48□□□□□ -1.85
SEMA3D-204ENST00000484038 HSPB8Q9UJY1 196 aa3.48□□□□□ -1.85
SEMA3D-204ENST00000484038 C20orf202A1L168 122 aa3.47□□□□□ -1.85
SEMA3D-204ENST00000484038 MAP1LC3AQ9H492 121 aa3.47□□□□□ -1.85
SEMA3D-204ENST00000484038 XAGE1AQ9HD64 81 aa3.47□□□□□ -1.85
SEMA3D-204ENST00000484038 SPANXA1Q9NS26 97 aa3.47□□□□□ -1.85
SEMA3D-204ENST00000484038 C22orf24Q9Y442 160 aa3.47□□□□□ -1.85
SEMA3D-204ENST00000484038 BCE1O60756 84 aa3.46□□□□□ -1.86
SEMA3D-204ENST00000484038 HBDP02042 147 aa3.46□□□□□ -1.86
SEMA3D-204ENST00000484038 G0S2P27469 103 aa3.46□□□□□ -1.86
SEMA3D-204ENST00000484038 DSCR10P59022 87 aa3.46□□□□□ -1.86
SEMA3D-204ENST00000484038 KIAA0087Q14695 138 aa3.46□□□□□ -1.86
SEMA3D-204ENST00000484038 LBHQ53QV2 105 aaPredicted RBP3.46□□□□□ -1.86
SEMA3D-204ENST00000484038 LINC00242Q5T6M2 205 aa3.46□□□□□ -1.86
SEMA3D-204ENST00000484038 LINC00304Q8N9R0 145 aa3.46□□□□□ -1.86
SEMA3D-204ENST00000484038 FAM104AQ969W3 186 aa3.46□□□□□ -1.86
SEMA3D-204ENST00000484038 CRCT1Q9UGL9 99 aa3.46□□□□□ -1.86
SEMA3D-204ENST00000484038 RPL37AP8A6NKH3 93 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms