RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 PRR3P79522 188 aaKnown RBP9.17□□□□□ -0.94
CLK3-204ENST00000483723 SMIM11BQ8TCY0 68 aa9.17□□□□□ -0.94
CLK3-204ENST00000483723 CARD19Q96LW7 228 aa9.17□□□□□ -0.94
CLK3-204ENST00000483723 TRBV10-2A0A0K0K1G8 114 aa9.16□□□□□ -0.94
CLK3-204ENST00000483723 ATXN8Q156A1 80 aa9.16□□□□□ -0.94
CLK3-204ENST00000483723 DNAH7Q8WXX0 4024 aa9.15□□□□□ -0.94
CLK3-204ENST00000483723 CSMD3Q7Z407 3707 aa9.15□□□□□ -0.94
CLK3-204ENST00000483723 Q6ZRP5 223 aa9.15□□□□□ -0.94
CLK3-204ENST00000483723 WFDC2Q14508 124 aa9.14□□□□□ -0.95
CLK3-204ENST00000483723 OR13C6PQ8NH95 151 aa9.14□□□□□ -0.95
CLK3-204ENST00000483723 TMEM126AQ9H061 195 aa9.14□□□□□ -0.95
CLK3-204ENST00000483723 XAGE1AQ9HD64 81 aa9.14□□□□□ -0.95
CLK3-204ENST00000483723 PLECQ15149 4684 aaKnown RBP9.14□□□□□ -0.95
CLK3-204ENST00000483723 LST1O00453 97 aa9.14□□□□□ -0.95
CLK3-204ENST00000483723 SMCPP49901 116 aaPredicted RBP9.14□□□□□ -0.95
CLK3-204ENST00000483723 LINC01600Q96MT4 127 aa9.14□□□□□ -0.95
CLK3-204ENST00000483723 LECT2O14960 151 aa9.13□□□□□ -0.95
CLK3-204ENST00000483723 LINC01620Q4KN68 170 aa9.13□□□□□ -0.95
CLK3-204ENST00000483723 Q6ZRN7 208 aaPredicted RBP9.13□□□□□ -0.95
CLK3-204ENST00000483723 CLEC2BQ92478 149 aa9.13□□□□□ -0.95
CLK3-204ENST00000483723 VPREB1P12018 145 aa9.12□□□□□ -0.95
CLK3-204ENST00000483723 WWC2-AS2Q96NR7 200 aa9.12□□□□□ -0.95
CLK3-204ENST00000483723 M0QXV9 152 aa9.11□□□□□ -0.95
CLK3-204ENST00000483723 PSCAO43653 123 aa9.11□□□□□ -0.95
CLK3-204ENST00000483723 VPS13DQ5THJ4 4388 aa9.11□□□□□ -0.95
CLK3-204ENST00000483723 LRCOL1A6NCL2 159 aa9.11□□□□□ -0.95
CLK3-204ENST00000483723 H0YGX0 51 aa9.11□□□□□ -0.95
CLK3-204ENST00000483723 NCR3O14931 201 aa9.11□□□□□ -0.95
CLK3-204ENST00000483723 IGLV6-57P01721 117 aa9.11□□□□□ -0.95
CLK3-204ENST00000483723 CNBPP62633 177 aaKnown RBP9.11□□□□□ -0.95
CLK3-204ENST00000483723 GAGE2EQ4V326 116 aa9.11□□□□□ -0.95
CLK3-204ENST00000483723 C9orf129Q5T035 196 aaKnown RBP9.11□□□□□ -0.95
CLK3-204ENST00000483723 MTURNQ8N3F0 131 aa9.11□□□□□ -0.95
CLK3-204ENST00000483723 GAGE2DQ9UEU5 116 aa9.11□□□□□ -0.95
CLK3-204ENST00000483723 C14orf177Q52M58 125 aa9.1□□□□□ -0.95
CLK3-204ENST00000483723 PLA2G2DQ9UNK4 145 aa9.1□□□□□ -0.95
CLK3-204ENST00000483723 C9JAW5 83 aa9.09□□□□□ -0.95
CLK3-204ENST00000483723 Q6ZR54 194 aa9.09□□□□□ -0.95
CLK3-204ENST00000483723 STARD9Q9P2P6 4700 aa9.09□□□□□ -0.95
CLK3-204ENST00000483723 TRACP01848 142 aa9.08□□□□□ -0.96
CLK3-204ENST00000483723 RPL18AQ02543 176 aaKnown RBP9.08□□□□□ -0.96
CLK3-204ENST00000483723 S100A7L2Q5SY68 101 aa9.08□□□□□ -0.96
CLK3-204ENST00000483723 FAM218AQ96MZ4 157 aa9.08□□□□□ -0.96
CLK3-204ENST00000483723 M0R378 163 aa9.08□□□□□ -0.96
CLK3-204ENST00000483723 SLC25A20O43772 301 aa9.08□□□□□ -0.96
CLK3-204ENST00000483723 LOC107984640A0A0U1RRK4 108 aa9.07□□□□□ -0.96
CLK3-204ENST00000483723 ETDBQ3ZM63 59 aa9.05□□□□□ -0.96
CLK3-204ENST00000483723 IGLV5-37A0A075B6J1 123 aa9.05□□□□□ -0.96
CLK3-204ENST00000483723 TRBV10-3A0A0K0K1G6 114 aa9.05□□□□□ -0.96
CLK3-204ENST00000483723 H3BT86 120 aa9.05□□□□□ -0.96
CLK3-204ENST00000483723 M0R2N4 97 aa9.05□□□□□ -0.96
CLK3-204ENST00000483723 OCIAD2Q56VL3 154 aa9.05□□□□□ -0.96
CLK3-204ENST00000483723 ANKRD29Q8N6D5 301 aa9.05□□□□□ -0.96
CLK3-204ENST00000483723 C6orf99Q4VX62 202 aa9.03□□□□□ -0.96
CLK3-204ENST00000483723 SERTAD4-AS1Q5TG53 156 aa9.03□□□□□ -0.96
CLK3-204ENST00000483723 TENM2Q9NT68 2774 aa9.03□□□□□ -0.96
CLK3-204ENST00000483723 A0A1B0GX51 115 aa9.02□□□□□ -0.96
CLK3-204ENST00000483723 TEN1Q86WV5 123 aa9.02□□□□□ -0.96
CLK3-204ENST00000483723 LYSTQ99698 3801 aa9.02□□□□□ -0.96
CLK3-204ENST00000483723 A0A087WYN8 130 aa9.02□□□□□ -0.97
CLK3-204ENST00000483723 C3orf84H3BNL1 204 aa9.02□□□□□ -0.97
CLK3-204ENST00000483723 GAGE2BQ13066 116 aa9.02□□□□□ -0.97
CLK3-204ENST00000483723 KRTAP7-1Q8IUC3 87 aa9.02□□□□□ -0.97
CLK3-204ENST00000483723 C9orf163Q8N9P6 203 aa9.01□□□□□ -0.97
CLK3-204ENST00000483723 CBY1Q9Y3M2 126 aa9.01□□□□□ -0.97
CLK3-204ENST00000483723 TRAV23DV6A0A075B6W5 121 aa9□□□□□ -0.97
CLK3-204ENST00000483723 C16orf90A8MZG2 172 aa9□□□□□ -0.97
CLK3-204ENST00000483723 LINC00476Q8WZB0 136 aa9□□□□□ -0.97
CLK3-204ENST00000483723 TRBV7-6A0A0J9YX20 115 aa9□□□□□ -0.97
CLK3-204ENST00000483723 LINC00167Q96N53 147 aa9□□□□□ -0.97
CLK3-204ENST00000483723 DNAH10Q8IVF4 4471 aa8.99□□□□□ -0.97
CLK3-204ENST00000483723 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.99□□□□□ -0.97
CLK3-204ENST00000483723 K7ERU9 68 aa8.99□□□□□ -0.97
CLK3-204ENST00000483723 LINC00575Q6W349 94 aa8.99□□□□□ -0.97
CLK3-204ENST00000483723 Q8N814 137 aa8.99□□□□□ -0.97
CLK3-204ENST00000483723 NKAPP1Q8N9T2 125 aa8.99□□□□□ -0.97
CLK3-204ENST00000483723 C7orf33Q8WU49 177 aa8.99□□□□□ -0.97
CLK3-204ENST00000483723 A0A087WTM6 91 aa8.98□□□□□ -0.97
CLK3-204ENST00000483723 A0A096LNI7 61 aa8.98□□□□□ -0.97
CLK3-204ENST00000483723 FAM168BA1KXE4 195 aa8.98□□□□□ -0.97
CLK3-204ENST00000483723 ZNF73O43830 326 aaPredicted RBP8.98□□□□□ -0.97
CLK3-204ENST00000483723 LY6G6CO95867 125 aa8.98□□□□□ -0.97
CLK3-204ENST00000483723 BAALC-AS2P0C853 105 aa8.98□□□□□ -0.97
CLK3-204ENST00000483723 DIRC1Q969H9 104 aa8.98□□□□□ -0.97
CLK3-204ENST00000483723 KCNQ1DNQ9H478 68 aa8.98□□□□□ -0.97
CLK3-204ENST00000483723 PPDPFLQ8WWR9 84 aa8.97□□□□□ -0.97
CLK3-204ENST00000483723 C22orf24Q9Y442 160 aa8.97□□□□□ -0.97
CLK3-204ENST00000483723 C1orf134Q5TEV5 83 aa8.96□□□□□ -0.98
CLK3-204ENST00000483723 PKIGQ9Y2B9 76 aa8.96□□□□□ -0.98
CLK3-204ENST00000483723 DNAL4O96015 105 aa8.95□□□□□ -0.98
CLK3-204ENST00000483723 SDIM1Q6ZPB5 146 aa8.95□□□□□ -0.98
CLK3-204ENST00000483723 IGLV1-50A0A075B6I6 118 aa8.94□□□□□ -0.98
CLK3-204ENST00000483723 ELOF1P60002 83 aaKnown RBP8.94□□□□□ -0.98
CLK3-204ENST00000483723 COX7BP24311 80 aa8.94□□□□□ -0.98
CLK3-204ENST00000483723 KMT2CQ8NEZ4 4911 aaKnown RBP8.93□□□□□ -0.98
CLK3-204ENST00000483723 A0A1W2PNN7 141 aa8.93□□□□□ -0.98
CLK3-204ENST00000483723 SNCGO76070 127 aa8.93□□□□□ -0.98
CLK3-204ENST00000483723 MRPL55Q7Z7F7 128 aaKnown RBP8.93□□□□□ -0.98
CLK3-204ENST00000483723 hADV29S1A0JD25 119 aa8.92□□□□□ -0.98
CLK3-204ENST00000483723 J3QR89 54 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms