RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 SYS1-DBNDD2H3BUS1 97 aa10.95□□□□□ -0.66
HDAC6-225ENST00000483506 VPREB1P12018 145 aa10.95□□□□□ -0.66
HDAC6-225ENST00000483506 DIRC1Q969H9 104 aa10.95□□□□□ -0.66
HDAC6-225ENST00000483506 PLEKHB2Q96CS7 222 aa10.95□□□□□ -0.66
HDAC6-225ENST00000483506 LINC00167Q96N53 147 aa10.95□□□□□ -0.66
HDAC6-225ENST00000483506 PMCHL2Q9BQD1 86 aa10.95□□□□□ -0.66
HDAC6-225ENST00000483506 NDUFA12Q9UI09 145 aa10.95□□□□□ -0.66
HDAC6-225ENST00000483506 TSPEAR-AS2P59090 65 aa10.94□□□□□ -0.66
HDAC6-225ENST00000483506 NKAPP1Q8N9T2 125 aa10.94□□□□□ -0.66
HDAC6-225ENST00000483506 MYMXA0A1B0GTQ4 84 aa10.93□□□□□ -0.66
HDAC6-225ENST00000483506 H0Y9J4 135 aa10.93□□□□□ -0.66
HDAC6-225ENST00000483506 LINC00158P58513 81 aa10.93□□□□□ -0.66
HDAC6-225ENST00000483506 HERVK_113P61574 105 aa10.93□□□□□ -0.66
HDAC6-225ENST00000483506 LINC00587B1AMM8 73 aa10.92□□□□□ -0.66
HDAC6-225ENST00000483506 RPL24P83731 157 aaKnown RBP10.92□□□□□ -0.66
HDAC6-225ENST00000483506 J3QQQ9 107 aa10.91□□□□□ -0.66
HDAC6-225ENST00000483506 ATP6V1G1O75348 118 aa10.91□□□□□ -0.66
HDAC6-225ENST00000483506 SMIM13P0DJ93 91 aa10.91□□□□□ -0.66
HDAC6-225ENST00000483506 LINC01545Q5VT33 79 aa10.91□□□□□ -0.66
HDAC6-225ENST00000483506 Q8NDZ9 215 aa10.91□□□□□ -0.66
HDAC6-225ENST00000483506 RPL37AP8A6NKH3 93 aa10.9□□□□□ -0.66
HDAC6-225ENST00000483506 ZNF861PO60384 105 aa10.9□□□□□ -0.66
HDAC6-225ENST00000483506 NMUP48645 174 aa10.9□□□□□ -0.66
HDAC6-225ENST00000483506 KRTAP10-8P60410 259 aa10.9□□□□□ -0.66
HDAC6-225ENST00000483506 PET117Q6UWS5 81 aa10.9□□□□□ -0.66
HDAC6-225ENST00000483506 GAGE10A6NGK3 116 aa10.89□□□□□ -0.67
HDAC6-225ENST00000483506 BCE1O60756 84 aa10.89□□□□□ -0.67
HDAC6-225ENST00000483506 MEIG1Q5JSS6 88 aa10.89□□□□□ -0.67
HDAC6-225ENST00000483506 A0A0U1RRA0 63 aa10.88□□□□□ -0.67
HDAC6-225ENST00000483506 E9PLD3 99 aa10.88□□□□□ -0.67
HDAC6-225ENST00000483506 IGLV1-50A0A075B6I6 118 aa10.87□□□□□ -0.67
HDAC6-225ENST00000483506 C3orf79P0CE67 100 aa10.87□□□□□ -0.67
HDAC6-225ENST00000483506 MIR7-3HGQ8N6C7 128 aa10.87□□□□□ -0.67
HDAC6-225ENST00000483506 LGALS3P17931 250 aaKnown RBP10.86□□□□□ -0.67
HDAC6-225ENST00000483506 LOC107984156A0A0G2JMH3 177 aa10.85□□□□□ -0.67
HDAC6-225ENST00000483506 KRTAP1-4P0C5Y4 121 aa10.85□□□□□ -0.67
HDAC6-225ENST00000483506 KRTAP13-1Q8IUC0 172 aa10.85□□□□□ -0.67
HDAC6-225ENST00000483506 ARL17AQ8IVW1 177 aa10.85□□□□□ -0.67
HDAC6-225ENST00000483506 HMCN2Q8NDA2 5059 aa10.84□□□□□ -0.67
HDAC6-225ENST00000483506 IGKV2-28A0A075B6P5 120 aa10.84□□□□□ -0.67
HDAC6-225ENST00000483506 IGKV2D-28P01615 120 aa10.84□□□□□ -0.67
HDAC6-225ENST00000483506 RPL28P46779 137 aaKnown RBP10.84□□□□□ -0.67
HDAC6-225ENST00000483506 M0R378 163 aa10.82□□□□□ -0.68
HDAC6-225ENST00000483506 BOD1L2Q8IYS8 172 aa10.82□□□□□ -0.68
HDAC6-225ENST00000483506 IGKV2D-26A0A0A0MRZ7 120 aa10.81□□□□□ -0.68
HDAC6-225ENST00000483506 KRTDAPP60985 99 aa10.81□□□□□ -0.68
HDAC6-225ENST00000483506 TMEM126AQ9H061 195 aa10.8□□□□□ -0.68
HDAC6-225ENST00000483506 A0A0J9YXY3 114 aa10.79□□□□□ -0.68
HDAC6-225ENST00000483506 TMEM238C9JI98 176 aa10.78□□□□□ -0.68
HDAC6-225ENST00000483506 DAND5Q8N907 189 aa10.78□□□□□ -0.68
HDAC6-225ENST00000483506 C20orf202A1L168 122 aa10.77□□□□□ -0.69
HDAC6-225ENST00000483506 UBE2AP49459 152 aa10.77□□□□□ -0.69
HDAC6-225ENST00000483506 PRR26Q8N8Z3 221 aa10.77□□□□□ -0.69
HDAC6-225ENST00000483506 HIST3H2BBQ8N257 126 aa10.76□□□□□ -0.69
HDAC6-225ENST00000483506 NCR3O14931 201 aa10.75□□□□□ -0.69
HDAC6-225ENST00000483506 AKR1D1P51857 326 aa10.75□□□□□ -0.69
HDAC6-225ENST00000483506 ADAMTSL4-AS1Q5T5F5 129 aa10.75□□□□□ -0.69
HDAC6-225ENST00000483506 TRBV10-2A0A0K0K1G8 114 aa10.74□□□□□ -0.69
HDAC6-225ENST00000483506 PRYO14603 147 aa10.74□□□□□ -0.69
HDAC6-225ENST00000483506 TIMM17BO60830 172 aa10.74□□□□□ -0.69
HDAC6-225ENST00000483506 NDUFC2O95298 119 aa10.74□□□□□ -0.69
HDAC6-225ENST00000483506 LITAFQ99732 161 aa10.74□□□□□ -0.69
HDAC6-225ENST00000483506 KCNQ1DNQ9H478 68 aa10.74□□□□□ -0.69
HDAC6-225ENST00000483506 SPRR1AP35321 89 aa10.73□□□□□ -0.69
HDAC6-225ENST00000483506 RPL13AP40429 203 aaKnown RBP10.73□□□□□ -0.69
HDAC6-225ENST00000483506 FAM19A1Q7Z5A9 133 aa10.73□□□□□ -0.69
HDAC6-225ENST00000483506 HIST1H2BLQ99880 126 aa10.73□□□□□ -0.69
HDAC6-225ENST00000483506 MIEN1Q9BRT3 115 aa10.73□□□□□ -0.69
HDAC6-225ENST00000483506 PRLHP81277 87 aa10.72□□□□□ -0.69
HDAC6-225ENST00000483506 SOSTDC1Q6X4U4 206 aa10.72□□□□□ -0.69
HDAC6-225ENST00000483506 SPANXB1Q9NS25 103 aaPredicted RBP10.72□□□□□ -0.69
HDAC6-225ENST00000483506 TRBV10-3A0A0K0K1G6 114 aa10.71□□□□□ -0.69
HDAC6-225ENST00000483506 ZNF815PA8K554 130 aa10.71□□□□□ -0.69
HDAC6-225ENST00000483506 KRTAP4-16G5E9R7 235 aaPredicted RBP10.7□□□□□ -0.7
HDAC6-225ENST00000483506 EIF4EBP3O60516 100 aaPredicted RBP10.7□□□□□ -0.7
HDAC6-225ENST00000483506 LINC00337Q8N6G1 96 aa10.7□□□□□ -0.7
HDAC6-225ENST00000483506 TTTY13Q9BZ97 58 aa10.7□□□□□ -0.7
HDAC6-225ENST00000483506 S100A6P06703 90 aa10.69□□□□□ -0.7
HDAC6-225ENST00000483506 S100A2P29034 98 aa10.69□□□□□ -0.7
HDAC6-225ENST00000483506 ANKRD39Q53RE8 183 aa10.69□□□□□ -0.7
HDAC6-225ENST00000483506 A0A087X002 238 aa10.67□□□□□ -0.7
HDAC6-225ENST00000483506 IGLV6-57P01721 117 aa10.67□□□□□ -0.7
HDAC6-225ENST00000483506 DDTP30046 118 aa10.67□□□□□ -0.7
HDAC6-225ENST00000483506 SNRPEP62304 92 aaKnown RBP10.67□□□□□ -0.7
HDAC6-225ENST00000483506 FAM229BQ4G0N7 80 aa10.67□□□□□ -0.7
HDAC6-225ENST00000483506 ATOH7Q8N100 152 aa10.67□□□□□ -0.7
HDAC6-225ENST00000483506 LINC00308Q8TCZ7 52 aa10.67□□□□□ -0.7
HDAC6-225ENST00000483506 CRYGAP11844 174 aa10.65□□□□□ -0.7
HDAC6-225ENST00000483506 NPC2P61916 151 aa10.65□□□□□ -0.7
HDAC6-225ENST00000483506 S100A12P80511 92 aa10.65□□□□□ -0.7
HDAC6-225ENST00000483506 SPANXCQ9NY87 97 aa10.64□□□□□ -0.71
HDAC6-225ENST00000483506 HIGD2AQ9BW72 106 aa10.63□□□□□ -0.71
HDAC6-225ENST00000483506 SPANXDQ9BXN6 97 aa10.63□□□□□ -0.71
HDAC6-225ENST00000483506 ETDCA0A1B0GVM5 59 aa10.62□□□□□ -0.71
HDAC6-225ENST00000483506 C5orf52A6NGY3 159 aa10.62□□□□□ -0.71
HDAC6-225ENST00000483506 S100A7L2Q5SY68 101 aa10.62□□□□□ -0.71
HDAC6-225ENST00000483506 PPDPFQ9H3Y8 114 aa10.62□□□□□ -0.71
HDAC6-225ENST00000483506 ANAPC11Q9NYG5 84 aa10.62□□□□□ -0.71
HDAC6-225ENST00000483506 SCGB1D4Q6XE38 83 aa10.61□□□□□ -0.71
HDAC6-225ENST00000483506 PCP2Q8IVA1 136 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms