RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 KRTAP3-3Q9BYR6 98 aa8.21□□□□□ -1.1
SSR1-208ENST00000483409 KRTAP3-2Q9BYR7 98 aa8.21□□□□□ -1.1
SSR1-208ENST00000483409 TP73-AS1Q9UF72 201 aa8.21□□□□□ -1.1
SSR1-208ENST00000483409 GAGE10A6NGK3 116 aa8.2□□□□□ -1.1
SSR1-208ENST00000483409 IGLV7-43P04211 117 aa8.2□□□□□ -1.1
SSR1-208ENST00000483409 SMIM13P0DJ93 91 aa8.2□□□□□ -1.1
SSR1-208ENST00000483409 MEIG1Q5JSS6 88 aa8.2□□□□□ -1.1
SSR1-208ENST00000483409 NKAPP1Q8N9T2 125 aa8.2□□□□□ -1.1
SSR1-208ENST00000483409 PLEKHB2Q96CS7 222 aa8.2□□□□□ -1.1
SSR1-208ENST00000483409 HERC1Q15751 4861 aa8.2□□□□□ -1.1
SSR1-208ENST00000483409 IGLV5-37A0A075B6J1 123 aa8.19□□□□□ -1.1
SSR1-208ENST00000483409 MYMXA0A1B0GTQ4 84 aa8.19□□□□□ -1.1
SSR1-208ENST00000483409 HERV-K104P63124 156 aa8.19□□□□□ -1.1
SSR1-208ENST00000483409 LINC00167Q96N53 147 aa8.19□□□□□ -1.1
SSR1-208ENST00000483409 RPL37AP8A6NKH3 93 aa8.18□□□□□ -1.1
SSR1-208ENST00000483409 J3QQQ9 107 aa8.18□□□□□ -1.1
SSR1-208ENST00000483409 C3orf79P0CE67 100 aa8.18□□□□□ -1.1
SSR1-208ENST00000483409 LINC01545Q5VT33 79 aa8.18□□□□□ -1.1
SSR1-208ENST00000483409 VPREB1P12018 145 aa8.17□□□□□ -1.1
SSR1-208ENST00000483409 LGALS3P17931 250 aaKnown RBP8.17□□□□□ -1.1
SSR1-208ENST00000483409 KRTDAPP60985 99 aa8.17□□□□□ -1.1
SSR1-208ENST00000483409 REG3GQ6UW15 175 aa8.17□□□□□ -1.1
SSR1-208ENST00000483409 PET117Q6UWS5 81 aa8.17□□□□□ -1.1
SSR1-208ENST00000483409 Q8NDZ9 215 aa8.17□□□□□ -1.1
SSR1-208ENST00000483409 MT1HL1P0DM35 61 aa8.16□□□□□ -1.1
SSR1-208ENST00000483409 MIR7-3HGQ8N6C7 128 aa8.16□□□□□ -1.1
SSR1-208ENST00000483409 RPL24P83731 157 aaKnown RBP8.15□□□□□ -1.1
SSR1-208ENST00000483409 DIRC1Q969H9 104 aa8.15□□□□□ -1.1
SSR1-208ENST00000483409 TNXBP22105 4242 aa8.15□□□□□ -1.11
SSR1-208ENST00000483409 IGKV2-28A0A075B6P5 120 aa8.14□□□□□ -1.11
SSR1-208ENST00000483409 LINC00587B1AMM8 73 aa8.14□□□□□ -1.11
SSR1-208ENST00000483409 E9PLD3 99 aa8.14□□□□□ -1.11
SSR1-208ENST00000483409 IGKV2D-28P01615 120 aa8.14□□□□□ -1.11
SSR1-208ENST00000483409 NMUP48645 174 aa8.14□□□□□ -1.11
SSR1-208ENST00000483409 LINC01600Q96MT4 127 aa8.14□□□□□ -1.11
SSR1-208ENST00000483409 H0Y9J4 135 aa8.13□□□□□ -1.11
SSR1-208ENST00000483409 BOD1L2Q8IYS8 172 aa8.13□□□□□ -1.11
SSR1-208ENST00000483409 DAND5Q8N907 189 aa8.13□□□□□ -1.11
SSR1-208ENST00000483409 BCE1O60756 84 aa8.12□□□□□ -1.11
SSR1-208ENST00000483409 ZNF861PO60384 105 aa8.11□□□□□ -1.11
SSR1-208ENST00000483409 HIST3H2BBQ8N257 126 aa8.11□□□□□ -1.11
SSR1-208ENST00000483409 IGLV1-50A0A075B6I6 118 aa8.1□□□□□ -1.11
SSR1-208ENST00000483409 C20orf202A1L168 122 aa8.1□□□□□ -1.11
SSR1-208ENST00000483409 IGKV2D-26A0A0A0MRZ7 120 aa8.09□□□□□ -1.11
SSR1-208ENST00000483409 A0A0J9YXY3 114 aa8.09□□□□□ -1.11
SSR1-208ENST00000483409 TMEM238C9JI98 176 aa8.09□□□□□ -1.11
SSR1-208ENST00000483409 NCR3O14931 201 aa8.09□□□□□ -1.11
SSR1-208ENST00000483409 S100A6P06703 90 aa8.09□□□□□ -1.11
SSR1-208ENST00000483409 S100A2P29034 98 aa8.09□□□□□ -1.11
SSR1-208ENST00000483409 ATOH7Q8N100 152 aa8.09□□□□□ -1.11
SSR1-208ENST00000483409 M0R378 163 aa8.08□□□□□ -1.12
SSR1-208ENST00000483409 RPL28P46779 137 aaKnown RBP8.08□□□□□ -1.12
SSR1-208ENST00000483409 UBE2AP49459 152 aa8.08□□□□□ -1.12
SSR1-208ENST00000483409 HIST1H2BLQ99880 126 aa8.08□□□□□ -1.12
SSR1-208ENST00000483409 KRTAP10-8P60410 259 aa8.07□□□□□ -1.12
SSR1-208ENST00000483409 NPC2P61916 151 aa8.07□□□□□ -1.12
SSR1-208ENST00000483409 MIEN1Q9BRT3 115 aa8.07□□□□□ -1.12
SSR1-208ENST00000483409 TTTY13Q9BZ97 58 aa8.07□□□□□ -1.12
SSR1-208ENST00000483409 TMEM126AQ9H061 195 aa8.07□□□□□ -1.12
SSR1-208ENST00000483409 ZNF815PA8K554 130 aa8.06□□□□□ -1.12
SSR1-208ENST00000483409 ADAMTSL4-AS1Q5T5F5 129 aa8.06□□□□□ -1.12
SSR1-208ENST00000483409 LOC107984156A0A0G2JMH3 177 aa8.05□□□□□ -1.12
SSR1-208ENST00000483409 KRTAP1-4P0C5Y4 121 aa8.05□□□□□ -1.12
SSR1-208ENST00000483409 PRLHP81277 87 aa8.05□□□□□ -1.12
SSR1-208ENST00000483409 ANKRD39Q53RE8 183 aa8.05□□□□□ -1.12
SSR1-208ENST00000483409 FAM19A1Q7Z5A9 133 aa8.05□□□□□ -1.12
SSR1-208ENST00000483409 KRTAP13-1Q8IUC0 172 aa8.05□□□□□ -1.12
SSR1-208ENST00000483409 ARL17AQ8IVW1 177 aa8.05□□□□□ -1.12
SSR1-208ENST00000483409 SNRPEP62304 92 aaKnown RBP8.04□□□□□ -1.12
SSR1-208ENST00000483409 SOSTDC1Q6X4U4 206 aa8.04□□□□□ -1.12
SSR1-208ENST00000483409 PRR26Q8N8Z3 221 aa8.04□□□□□ -1.12
SSR1-208ENST00000483409 TRBV10-3A0A0K0K1G6 114 aa8.03□□□□□ -1.12
SSR1-208ENST00000483409 EIF4EBP3O60516 100 aaPredicted RBP8.03□□□□□ -1.12
SSR1-208ENST00000483409 LITAFQ99732 161 aa8.03□□□□□ -1.12
SSR1-208ENST00000483409 PRYO14603 147 aa8.02□□□□□ -1.13
SSR1-208ENST00000483409 TIMM17BO60830 172 aa8.02□□□□□ -1.13
SSR1-208ENST00000483409 AKR1D1P51857 326 aa8.02□□□□□ -1.13
SSR1-208ENST00000483409 SPANXB1Q9NS25 103 aaPredicted RBP8.02□□□□□ -1.13
SSR1-208ENST00000483409 TRBV10-2A0A0K0K1G8 114 aa8□□□□□ -1.13
SSR1-208ENST00000483409 NDUFC2O95298 119 aa8□□□□□ -1.13
SSR1-208ENST00000483409 SCGB1D4Q6XE38 83 aa8□□□□□ -1.13
SSR1-208ENST00000483409 PCP2Q8IVA1 136 aa8□□□□□ -1.13
SSR1-208ENST00000483409 LINC00308Q8TCZ7 52 aa8□□□□□ -1.13
SSR1-208ENST00000483409 KCNQ1DNQ9H478 68 aa8□□□□□ -1.13
SSR1-208ENST00000483409 C5orf52A6NGY3 159 aa7.99□□□□□ -1.13
SSR1-208ENST00000483409 DDTP30046 118 aa7.99□□□□□ -1.13
SSR1-208ENST00000483409 HIGD2AQ9BW72 106 aa7.98□□□□□ -1.13
SSR1-208ENST00000483409 ANAPC11Q9NYG5 84 aa7.98□□□□□ -1.13
SSR1-208ENST00000483409 ETDCA0A1B0GVM5 59 aa7.97□□□□□ -1.13
SSR1-208ENST00000483409 SPRR1AP35321 89 aa7.97□□□□□ -1.13
SSR1-208ENST00000483409 S100A12P80511 92 aa7.97□□□□□ -1.13
SSR1-208ENST00000483409 S100A7L2Q5SY68 101 aa7.97□□□□□ -1.13
SSR1-208ENST00000483409 LINC00337Q8N6G1 96 aa7.97□□□□□ -1.13
SSR1-208ENST00000483409 A0A087X002 238 aa7.96□□□□□ -1.14
SSR1-208ENST00000483409 HSBP1L1C9JCN9 74 aa7.96□□□□□ -1.14
SSR1-208ENST00000483409 IGLV6-57P01721 117 aa7.96□□□□□ -1.14
SSR1-208ENST00000483409 RPL13AP40429 203 aaKnown RBP7.96□□□□□ -1.14
SSR1-208ENST00000483409 SPANXCQ9NY87 97 aa7.96□□□□□ -1.14
SSR1-208ENST00000483409 KRTAP4-16G5E9R7 235 aaPredicted RBP7.95□□□□□ -1.14
SSR1-208ENST00000483409 SCGB1D1O95968 90 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms