RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 LEPROTL1O95214 131 aa11.87□□□□□ -0.51
MSH5-215ENST00000482280 FAM19A1Q7Z5A9 133 aa11.87□□□□□ -0.51
MSH5-215ENST00000482280 HERV-K104P63124 156 aa11.86□□□□□ -0.51
MSH5-215ENST00000482280 TYMSOSQ8TAI1 123 aa11.85□□□□□ -0.51
MSH5-215ENST00000482280 HSPB8Q9UJY1 196 aa11.85□□□□□ -0.51
MSH5-215ENST00000482280 MAP1LC3CQ9BXW4 147 aa11.84□□□□□ -0.51
MSH5-215ENST00000482280 TMEM126AQ9H061 195 aa11.84□□□□□ -0.51
MSH5-215ENST00000482280 SERF1AO75920 110 aa11.83□□□□□ -0.52
MSH5-215ENST00000482280 UBR4Q5T4S7 5183 aa11.82□□□□□ -0.52
MSH5-215ENST00000482280 MYMXA0A1B0GTQ4 84 aa11.82□□□□□ -0.52
MSH5-215ENST00000482280 TMEM238C9JI98 176 aa11.82□□□□□ -0.52
MSH5-215ENST00000482280 PLNP26678 52 aa11.82□□□□□ -0.52
MSH5-215ENST00000482280 PRLHP81277 87 aa11.82□□□□□ -0.52
MSH5-215ENST00000482280 SLC7A5P1Q8MH63 180 aa11.82□□□□□ -0.52
MSH5-215ENST00000482280 NDUFA12Q9UI09 145 aa11.82□□□□□ -0.52
MSH5-215ENST00000482280 SMIM13P0DJ93 91 aa11.81□□□□□ -0.52
MSH5-215ENST00000482280 HERVK_113P61574 105 aa11.81□□□□□ -0.52
MSH5-215ENST00000482280 PRR4Q16378 134 aa11.81□□□□□ -0.52
MSH5-215ENST00000482280 M0R378 163 aa11.8□□□□□ -0.52
MSH5-215ENST00000482280 KRTAP13-1Q8IUC0 172 aa11.8□□□□□ -0.52
MSH5-215ENST00000482280 BOD1L2Q8IYS8 172 aa11.8□□□□□ -0.52
MSH5-215ENST00000482280 A0A087X002 238 aa11.79□□□□□ -0.52
MSH5-215ENST00000482280 FABP4P15090 132 aa11.79□□□□□ -0.52
MSH5-215ENST00000482280 S100A12P80511 92 aa11.79□□□□□ -0.52
MSH5-215ENST00000482280 IGKV2D-26A0A0A0MRZ7 120 aa11.78□□□□□ -0.52
MSH5-215ENST00000482280 TSPAN13O95857 204 aa11.78□□□□□ -0.52
MSH5-215ENST00000482280 FAM229BQ4G0N7 80 aa11.78□□□□□ -0.52
MSH5-215ENST00000482280 MIR7-3HGQ8N6C7 128 aa11.78□□□□□ -0.52
MSH5-215ENST00000482280 PLEKHB2Q96CS7 222 aa11.78□□□□□ -0.52
MSH5-215ENST00000482280 DPM2O94777 84 aa11.77□□□□□ -0.53
MSH5-215ENST00000482280 ANAPC11Q9NYG5 84 aa11.77□□□□□ -0.53
MSH5-215ENST00000482280 HIGD2AQ9BW72 106 aa11.76□□□□□ -0.53
MSH5-215ENST00000482280 LEPROTO15243 131 aa11.75□□□□□ -0.53
MSH5-215ENST00000482280 Q8NDZ9 215 aa11.75□□□□□ -0.53
MSH5-215ENST00000482280 NCR3O14931 201 aa11.74□□□□□ -0.53
MSH5-215ENST00000482280 LGALS3P17931 250 aaKnown RBP11.74□□□□□ -0.53
MSH5-215ENST00000482280 MIEN1Q9BRT3 115 aa11.74□□□□□ -0.53
MSH5-215ENST00000482280 COLCA2A8K830 154 aa11.73□□□□□ -0.53
MSH5-215ENST00000482280 IGKCP01834 107 aa11.73□□□□□ -0.53
MSH5-215ENST00000482280 J3QQQ9 107 aa11.72□□□□□ -0.53
MSH5-215ENST00000482280 PRYO14603 147 aa11.72□□□□□ -0.53
MSH5-215ENST00000482280 NMUP48645 174 aa11.72□□□□□ -0.53
MSH5-215ENST00000482280 LINC00310P59036 64 aa11.72□□□□□ -0.53
MSH5-215ENST00000482280 ZNF706Q9Y5V0 76 aaPredicted RBP11.71□□□□□ -0.53
MSH5-215ENST00000482280 ETDCA0A1B0GVM5 59 aa11.7□□□□□ -0.54
MSH5-215ENST00000482280 PMCHL2Q9BQD1 86 aa11.7□□□□□ -0.54
MSH5-215ENST00000482280 LINC00304Q8N9R0 145 aa11.69□□□□□ -0.54
MSH5-215ENST00000482280 LRP2P98164 4655 aa11.69□□□□□ -0.54
MSH5-215ENST00000482280 TSPEAR-AS2P59090 65 aa11.67□□□□□ -0.54
MSH5-215ENST00000482280 KRTAP13-2Q52LG2 175 aa11.67□□□□□ -0.54
MSH5-215ENST00000482280 LINC00337Q8N6G1 96 aa11.66□□□□□ -0.54
MSH5-215ENST00000482280 DAND5Q8N907 189 aa11.66□□□□□ -0.54
MSH5-215ENST00000482280 KCNQ1DNQ9H478 68 aa11.66□□□□□ -0.54
MSH5-215ENST00000482280 TRBV10-3A0A0K0K1G6 114 aa11.64□□□□□ -0.55
MSH5-215ENST00000482280 DDTP30046 118 aa11.63□□□□□ -0.55
MSH5-215ENST00000482280 S100A7L2Q5SY68 101 aa11.63□□□□□ -0.55
MSH5-215ENST00000482280 TRBV10-2A0A0K0K1G8 114 aa11.62□□□□□ -0.55
MSH5-215ENST00000482280 SPRR4Q96PI1 79 aa11.62□□□□□ -0.55
MSH5-215ENST00000482280 SPANXB1Q9NS25 103 aaPredicted RBP11.62□□□□□ -0.55
MSH5-215ENST00000482280 C4orf48Q5BLP8 95 aa11.61□□□□□ -0.55
MSH5-215ENST00000482280 LOC107984156A0A0G2JMH3 177 aa11.6□□□□□ -0.55
MSH5-215ENST00000482280 E9PLD3 99 aa11.6□□□□□ -0.55
MSH5-215ENST00000482280 SYS1-DBNDD2H3BUS1 97 aa11.6□□□□□ -0.55
MSH5-215ENST00000482280 HIST1H2BKO60814 126 aa11.6□□□□□ -0.55
MSH5-215ENST00000482280 HIST1H2BJP06899 126 aa11.6□□□□□ -0.55
MSH5-215ENST00000482280 HIST1H2BOP23527 126 aa11.6□□□□□ -0.55
MSH5-215ENST00000482280 HIST1H2BBP33778 126 aa11.6□□□□□ -0.55
MSH5-215ENST00000482280 SPRR1AP35321 89 aa11.6□□□□□ -0.55
MSH5-215ENST00000482280 HIST1H2BDP58876 126 aa11.6□□□□□ -0.55
MSH5-215ENST00000482280 HIST1H2BCP62807 126 aa11.6□□□□□ -0.55
MSH5-215ENST00000482280 CTAG1AP78358 180 aa11.6□□□□□ -0.55
MSH5-215ENST00000482280 HIST2H2BEQ16778 126 aa11.6□□□□□ -0.55
MSH5-215ENST00000482280 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.6□□□□□ -0.55
MSH5-215ENST00000482280 ARL17AQ8IVW1 177 aa11.6□□□□□ -0.55
MSH5-215ENST00000482280 HIST1H2BHQ93079 126 aa11.6□□□□□ -0.55
MSH5-215ENST00000482280 HIST1H2BNQ99877 126 aa11.6□□□□□ -0.55
MSH5-215ENST00000482280 HIST1H2BMQ99879 126 aa11.6□□□□□ -0.55
MSH5-215ENST00000482280 SMCR5Q8TEV8 140 aa11.59□□□□□ -0.55
MSH5-215ENST00000482280 NDUFC2O95298 119 aa11.58□□□□□ -0.56
MSH5-215ENST00000482280 SPAG11AQ6PDA7 123 aa11.58□□□□□ -0.56
MSH5-215ENST00000482280 C3orf22Q8N5N4 141 aa11.57□□□□□ -0.56
MSH5-215ENST00000482280 CBY1Q9Y3M2 126 aa11.57□□□□□ -0.56
MSH5-215ENST00000482280 A0A0J9YXY3 114 aa11.56□□□□□ -0.56
MSH5-215ENST00000482280 NPC2P61916 151 aa11.56□□□□□ -0.56
MSH5-215ENST00000482280 PET117Q6UWS5 81 aa11.55□□□□□ -0.56
MSH5-215ENST00000482280 RETNLBQ9BQ08 111 aa11.55□□□□□ -0.56
MSH5-215ENST00000482280 PPDPFQ9H3Y8 114 aa11.55□□□□□ -0.56
MSH5-215ENST00000482280 KRTAP4-16G5E9R7 235 aaPredicted RBP11.54□□□□□ -0.56
MSH5-215ENST00000482280 JOSD1Q15040 202 aaPredicted RBP11.54□□□□□ -0.56
MSH5-215ENST00000482280 B5MCH6 92 aa11.53□□□□□ -0.56
MSH5-215ENST00000482280 HINT1P49773 126 aaPredicted RBP11.53□□□□□ -0.56
MSH5-215ENST00000482280 GAGE2AQ6NT46 116 aa11.53□□□□□ -0.56
MSH5-215ENST00000482280 TRAV23DV6A0A075B6W5 121 aa11.52□□□□□ -0.57
MSH5-215ENST00000482280 LINC01545Q5VT33 79 aa11.52□□□□□ -0.57
MSH5-215ENST00000482280 Q6ZRX8 168 aa11.51□□□□□ -0.57
MSH5-215ENST00000482280 RNF213Q63HN8 5207 aa11.5□□□□□ -0.57
MSH5-215ENST00000482280 C20orf202A1L168 122 aa11.5□□□□□ -0.57
MSH5-215ENST00000482280 IGLV6-57P01721 117 aa11.5□□□□□ -0.57
MSH5-215ENST00000482280 ZNF815PA8K554 130 aa11.49□□□□□ -0.57
MSH5-215ENST00000482280 KRTDAPP60985 99 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms