RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 I3L3M4 83 aa0.81□□□□□ -2.28
USH2A-204ENST00000481786 IFNA1P01562 189 aa0.81□□□□□ -2.28
USH2A-204ENST00000481786 ARL14EPLP0DKL9 152 aa0.81□□□□□ -2.28
USH2A-204ENST00000481786 SULT1A1P50225 295 aa0.81□□□□□ -2.28
USH2A-204ENST00000481786 BCAP31P51572 246 aa0.81□□□□□ -2.28
USH2A-204ENST00000481786 SEC61GP60059 68 aa0.81□□□□□ -2.28
USH2A-204ENST00000481786 CD164Q04900 197 aa0.81□□□□□ -2.28
USH2A-204ENST00000481786 C6orf226Q5I0X4 101 aa0.81□□□□□ -2.28
USH2A-204ENST00000481786 C9orf153Q5TBE3 101 aa0.81□□□□□ -2.28
USH2A-204ENST00000481786 C1orf195Q5TG92 126 aa0.81□□□□□ -2.28
USH2A-204ENST00000481786 STX12Q86Y82 276 aa0.81□□□□□ -2.28
USH2A-204ENST00000481786 SMCR5Q8TEV8 140 aa0.81□□□□□ -2.28
USH2A-204ENST00000481786 SCP2D1Q9UJQ7 156 aa0.81□□□□□ -2.28
USH2A-204ENST00000481786 A0A1W2PPV4 95 aa0.8□□□□□ -2.28
USH2A-204ENST00000481786 PCP4L1A6NKN8 68 aa0.8□□□□□ -2.28
USH2A-204ENST00000481786 F8VRH5 84 aa0.8□□□□□ -2.28
USH2A-204ENST00000481786 PPP1R2P9O14990 202 aa0.8□□□□□ -2.28
USH2A-204ENST00000481786 SFT2D2O95562 160 aa0.8□□□□□ -2.28
USH2A-204ENST00000481786 TRGC1P0CF51 173 aa0.8□□□□□ -2.28
USH2A-204ENST00000481786 AKAIN1P0CW23 69 aa0.8□□□□□ -2.28
USH2A-204ENST00000481786 PMCHP20382 165 aa0.8□□□□□ -2.28
USH2A-204ENST00000481786 PVALBP20472 110 aaPredicted RBP0.8□□□□□ -2.28
USH2A-204ENST00000481786 DEFA3P59666 94 aa0.8□□□□□ -2.28
USH2A-204ENST00000481786 TEX261Q6UWH6 196 aa0.8□□□□□ -2.28
USH2A-204ENST00000481786 HRCT1Q6UXD1 115 aa0.8□□□□□ -2.28
USH2A-204ENST00000481786 TMEM136Q6ZRR5 245 aa0.8□□□□□ -2.28
USH2A-204ENST00000481786 HIST1H2BAQ96A08 127 aa0.8□□□□□ -2.28
USH2A-204ENST00000481786 OBSCN-AS1Q96MR7 158 aa0.8□□□□□ -2.28
USH2A-204ENST00000481786 TIMM21Q9BVV7 248 aa0.8□□□□□ -2.28
USH2A-204ENST00000481786 SPRR2GQ9BYE4 73 aa0.8□□□□□ -2.28
USH2A-204ENST00000481786 EIF5A2Q9GZV4 153 aaKnown RBP0.8□□□□□ -2.28
USH2A-204ENST00000481786 PRO2289Q9P1D8 64 aa0.8□□□□□ -2.28
USH2A-204ENST00000481786 TRBV6-5A0A0K0K1A5 114 aa0.79□□□□□ -2.28
USH2A-204ENST00000481786 A0A1W2PRE2 83 aa0.79□□□□□ -2.28
USH2A-204ENST00000481786 C9orf170A2RU37 121 aa0.79□□□□□ -2.28
USH2A-204ENST00000481786 F2Z2F3 143 aa0.79□□□□□ -2.28
USH2A-204ENST00000481786 SCO1O75880 301 aa0.79□□□□□ -2.28
USH2A-204ENST00000481786 LTAP01374 205 aa0.79□□□□□ -2.28
USH2A-204ENST00000481786 MRPS10P82664 201 aaKnown RBP0.79□□□□□ -2.28
USH2A-204ENST00000481786 RBM3P98179 157 aaKnown RBP0.79□□□□□ -2.28
USH2A-204ENST00000481786 Q6ZUT4 128 aa0.79□□□□□ -2.28
USH2A-204ENST00000481786 ADM2Q7Z4H4 148 aa0.79□□□□□ -2.28
USH2A-204ENST00000481786 Q8IZM0 81 aa0.79□□□□□ -2.28
USH2A-204ENST00000481786 GATD1Q8NB37 220 aa0.79□□□□□ -2.28
USH2A-204ENST00000481786 RPL39LQ96EH5 51 aaKnown RBP0.79□□□□□ -2.28
USH2A-204ENST00000481786 FMC1Q96HJ9 113 aa0.79□□□□□ -2.28
USH2A-204ENST00000481786 NKX6-2Q9C056 277 aaPredicted RBP0.79□□□□□ -2.28
USH2A-204ENST00000481786 WDR61Q9GZS3 305 aaKnown RBP0.79□□□□□ -2.28
USH2A-204ENST00000481786 RNASE7Q9H1E1 156 aaKnown RBP0.79□□□□□ -2.28
USH2A-204ENST00000481786 VCX2Q9H322 139 aa0.79□□□□□ -2.28
USH2A-204ENST00000481786 MCUBQ9NWR8 336 aa0.79□□□□□ -2.28
USH2A-204ENST00000481786 BLOC1S6Q9UL45 172 aa0.79□□□□□ -2.28
USH2A-204ENST00000481786 TRBV27A0A0K0K1C4 114 aa0.78□□□□□ -2.28
USH2A-204ENST00000481786 ANKRD20A5PA0PJZ0 165 aa0.78□□□□□ -2.28
USH2A-204ENST00000481786 IGSF23A1L1A6 192 aa0.78□□□□□ -2.28
USH2A-204ENST00000481786 FAM25AB3EWG3 89 aa0.78□□□□□ -2.28
USH2A-204ENST00000481786 FAM25CB3EWG5 89 aa0.78□□□□□ -2.28
USH2A-204ENST00000481786 FAM25GB3EWG6 89 aa0.78□□□□□ -2.28
USH2A-204ENST00000481786 H7C2G1 150 aa0.78□□□□□ -2.28
USH2A-204ENST00000481786 ERC2-IT1O76042 136 aa0.78□□□□□ -2.28
USH2A-204ENST00000481786 IGLC6P0CF74 106 aa0.78□□□□□ -2.28
USH2A-204ENST00000481786 STAG3L2P0CL84 134 aa0.78□□□□□ -2.28
USH2A-204ENST00000481786 STAG3L3P0CL85 134 aa0.78□□□□□ -2.28
USH2A-204ENST00000481786 GCHFRP30047 84 aa0.78□□□□□ -2.28
USH2A-204ENST00000481786 FCER1GP30273 86 aa0.78□□□□□ -2.28
USH2A-204ENST00000481786 SPRR1AP35321 89 aa0.78□□□□□ -2.28
USH2A-204ENST00000481786 UBE2G1P62253 170 aa0.78□□□□□ -2.28
USH2A-204ENST00000481786 HBBP68871 147 aa0.78□□□□□ -2.28
USH2A-204ENST00000481786 MRPS36P82909 103 aaKnown RBP0.78□□□□□ -2.28
USH2A-204ENST00000481786 KRTAP13-4Q3LI77 160 aa0.78□□□□□ -2.28
USH2A-204ENST00000481786 ALKAL2Q6UX46 152 aa0.78□□□□□ -2.28
USH2A-204ENST00000481786 SMIM4Q8WVI0 70 aa0.78□□□□□ -2.28
USH2A-204ENST00000481786 SEC22CQ9BRL7 303 aa0.78□□□□□ -2.28
USH2A-204ENST00000481786 ST20Q9HBF5 79 aa0.78□□□□□ -2.28
USH2A-204ENST00000481786 TMEM167BQ9NRX6 74 aa0.78□□□□□ -2.28
USH2A-204ENST00000481786 MED9Q9NWA0 146 aa0.78□□□□□ -2.28
USH2A-204ENST00000481786 TOMM7Q9P0U1 55 aa0.78□□□□□ -2.28
USH2A-204ENST00000481786 TRAV9-1A0A075B6T8 112 aa0.77□□□□□ -2.29
USH2A-204ENST00000481786 ETDCA0A1B0GVM5 59 aa0.77□□□□□ -2.29
USH2A-204ENST00000481786 A8MWL6 223 aa0.77□□□□□ -2.29
USH2A-204ENST00000481786 HMGB3O15347 200 aaKnown RBP0.77□□□□□ -2.29
USH2A-204ENST00000481786 ATP5HO75947 161 aa0.77□□□□□ -2.29
USH2A-204ENST00000481786 TCL1BO95988 128 aa0.77□□□□□ -2.29
USH2A-204ENST00000481786 CXorf1O96002 111 aa0.77□□□□□ -2.29
USH2A-204ENST00000481786 FAUP35544 74 aaKnown RBP0.77□□□□□ -2.29
USH2A-204ENST00000481786 POLR2KP53803 58 aaKnown RBP0.77□□□□□ -2.29
USH2A-204ENST00000481786 AQP4P55087 323 aa0.77□□□□□ -2.29
USH2A-204ENST00000481786 RPL23P62829 140 aaKnown RBP0.77□□□□□ -2.29
USH2A-204ENST00000481786 S100A12P80511 92 aa0.77□□□□□ -2.29
USH2A-204ENST00000481786 ZNF726P1Q15940 193 aa0.77□□□□□ -2.29
USH2A-204ENST00000481786 SMIM15Q7Z3B0 74 aa0.77□□□□□ -2.29
USH2A-204ENST00000481786 MCFD2Q8NI22 146 aa0.77□□□□□ -2.29
USH2A-204ENST00000481786 ZNF625Q96I27 306 aaPredicted RBP0.77□□□□□ -2.29
USH2A-204ENST00000481786 Q96NJ1 140 aa0.77□□□□□ -2.29
USH2A-204ENST00000481786 TCEAL7Q9BRU2 100 aa0.77□□□□□ -2.29
USH2A-204ENST00000481786 PRO1933Q9H354 126 aa0.77□□□□□ -2.29
USH2A-204ENST00000481786 KCNQ1DNQ9H478 68 aa0.77□□□□□ -2.29
USH2A-204ENST00000481786 SPANXA1Q9NS26 97 aa0.77□□□□□ -2.29
USH2A-204ENST00000481786 LSM5Q9Y4Y9 91 aaKnown RBP0.77□□□□□ -2.29
USH2A-204ENST00000481786 A0A1W2PNM2 257 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms