RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 SNAPINO95295 136 aa10.81□□□□□ -0.68
CLK1-211ENST00000481641 FAM229BQ4G0N7 80 aa10.81□□□□□ -0.68
CLK1-211ENST00000481641 RETNLBQ9BQ08 111 aa10.81□□□□□ -0.68
CLK1-211ENST00000481641 TMEM223A0PJW6 202 aa10.8□□□□□ -0.68
CLK1-211ENST00000481641 SVBPQ8N300 66 aa10.8□□□□□ -0.68
CLK1-211ENST00000481641 YPEL4Q96NS1 127 aa10.8□□□□□ -0.68
CLK1-211ENST00000481641 MUC2Q02817 5179 aa10.79□□□□□ -0.68
CLK1-211ENST00000481641 LINC00304Q8N9R0 145 aa10.79□□□□□ -0.68
CLK1-211ENST00000481641 IFI27L1Q96BM0 104 aa10.79□□□□□ -0.68
CLK1-211ENST00000481641 IGKV2D-26A0A0A0MRZ7 120 aa10.78□□□□□ -0.68
CLK1-211ENST00000481641 NDUFA5Q16718 116 aa10.78□□□□□ -0.68
CLK1-211ENST00000481641 SFTA2Q6UW10 78 aa10.78□□□□□ -0.68
CLK1-211ENST00000481641 PLEKHB2Q96CS7 222 aa10.78□□□□□ -0.68
CLK1-211ENST00000481641 TRAV12-1A0A0B4J245 112 aa10.77□□□□□ -0.69
CLK1-211ENST00000481641 CBLN2Q8IUK8 224 aa10.77□□□□□ -0.69
CLK1-211ENST00000481641 CHCHD1Q96BP2 118 aaKnown RBP10.77□□□□□ -0.69
CLK1-211ENST00000481641 SMIM13P0DJ93 91 aa10.76□□□□□ -0.69
CLK1-211ENST00000481641 C3orf22Q8N5N4 141 aa10.76□□□□□ -0.69
CLK1-211ENST00000481641 HIGD2AQ9BW72 106 aa10.76□□□□□ -0.69
CLK1-211ENST00000481641 FAM19A2Q8N3H0 131 aa10.75□□□□□ -0.69
CLK1-211ENST00000481641 MEIG1Q5JSS6 88 aa10.72□□□□□ -0.69
CLK1-211ENST00000481641 NCR3O14931 201 aa10.71□□□□□ -0.69
CLK1-211ENST00000481641 ATP6V1G1O75348 118 aa10.71□□□□□ -0.69
CLK1-211ENST00000481641 BOD1L2Q8IYS8 172 aa10.71□□□□□ -0.69
CLK1-211ENST00000481641 MIR7-3HGQ8N6C7 128 aa10.71□□□□□ -0.69
CLK1-211ENST00000481641 H0Y8G0 127 aa10.7□□□□□ -0.7
CLK1-211ENST00000481641 HSBP1O75506 76 aa10.69□□□□□ -0.7
CLK1-211ENST00000481641 SPRR4Q96PI1 79 aa10.69□□□□□ -0.7
CLK1-211ENST00000481641 NDUFA12Q9UI09 145 aa10.68□□□□□ -0.7
CLK1-211ENST00000481641 IGLV7-46A0A075B6I9 117 aa10.66□□□□□ -0.7
CLK1-211ENST00000481641 PRYO14603 147 aa10.66□□□□□ -0.7
CLK1-211ENST00000481641 TRGC2P03986 189 aa10.66□□□□□ -0.7
CLK1-211ENST00000481641 TSPEAR-AS2P59090 65 aa10.66□□□□□ -0.7
CLK1-211ENST00000481641 HERV-K104P63124 156 aa10.66□□□□□ -0.7
CLK1-211ENST00000481641 LINC00310P59036 64 aa10.65□□□□□ -0.7
CLK1-211ENST00000481641 TRBV10-3A0A0K0K1G6 114 aa10.64□□□□□ -0.71
CLK1-211ENST00000481641 MYMXA0A1B0GTQ4 84 aa10.64□□□□□ -0.71
CLK1-211ENST00000481641 SPRR1AP35321 89 aa10.64□□□□□ -0.71
CLK1-211ENST00000481641 DAND5Q8N907 189 aa10.64□□□□□ -0.71
CLK1-211ENST00000481641 SMCR5Q8TEV8 140 aa10.64□□□□□ -0.71
CLK1-211ENST00000481641 PPDPFQ9H3Y8 114 aa10.64□□□□□ -0.71
CLK1-211ENST00000481641 KCNQ1DNQ9H478 68 aa10.64□□□□□ -0.71
CLK1-211ENST00000481641 MUC17Q685J3 4493 aa10.63□□□□□ -0.71
CLK1-211ENST00000481641 SERF1AO75920 110 aa10.63□□□□□ -0.71
CLK1-211ENST00000481641 KRTAP4-16G5E9R7 235 aaPredicted RBP10.62□□□□□ -0.71
CLK1-211ENST00000481641 LEPROTL1O95214 131 aa10.62□□□□□ -0.71
CLK1-211ENST00000481641 LINC00337Q8N6G1 96 aa10.62□□□□□ -0.71
CLK1-211ENST00000481641 CDIP1Q9H305 208 aa10.62□□□□□ -0.71
CLK1-211ENST00000481641 ETDCA0A1B0GVM5 59 aa10.61□□□□□ -0.71
CLK1-211ENST00000481641 LINC00587B1AMM8 73 aa10.61□□□□□ -0.71
CLK1-211ENST00000481641 LEPROTO15243 131 aa10.61□□□□□ -0.71
CLK1-211ENST00000481641 TPRXLQ17RH7 258 aa10.61□□□□□ -0.71
CLK1-211ENST00000481641 ZNF706Q9Y5V0 76 aaPredicted RBP10.61□□□□□ -0.71
CLK1-211ENST00000481641 CTAG1AP78358 180 aa10.6□□□□□ -0.71
CLK1-211ENST00000481641 PMCHL2Q9BQD1 86 aa10.6□□□□□ -0.71
CLK1-211ENST00000481641 MAP1LC3CQ9BXW4 147 aa10.6□□□□□ -0.71
CLK1-211ENST00000481641 A0A0U1RQV1 116 aa10.59□□□□□ -0.71
CLK1-211ENST00000481641 FABP4P15090 132 aa10.59□□□□□ -0.71
CLK1-211ENST00000481641 SPAG11AQ6PDA7 123 aa10.59□□□□□ -0.71
CLK1-211ENST00000481641 Q8NBF4 154 aa10.59□□□□□ -0.71
CLK1-211ENST00000481641 J3QQQ9 107 aa10.57□□□□□ -0.72
CLK1-211ENST00000481641 C4orf48Q5BLP8 95 aa10.57□□□□□ -0.72
CLK1-211ENST00000481641 FAT4Q6V0I7 4981 aa10.56□□□□□ -0.72
CLK1-211ENST00000481641 B5MCH6 92 aa10.56□□□□□ -0.72
CLK1-211ENST00000481641 ERC2-IT1O76042 136 aa10.56□□□□□ -0.72
CLK1-211ENST00000481641 PLNP26678 52 aa10.56□□□□□ -0.72
CLK1-211ENST00000481641 GAGE2AQ6NT46 116 aa10.56□□□□□ -0.72
CLK1-211ENST00000481641 LOC107984156A0A0G2JMH3 177 aa10.55□□□□□ -0.72
CLK1-211ENST00000481641 DPM2O94777 84 aa10.55□□□□□ -0.72
CLK1-211ENST00000481641 DDTP30046 118 aa10.55□□□□□ -0.72
CLK1-211ENST00000481641 ARL17AQ8IVW1 177 aa10.55□□□□□ -0.72
CLK1-211ENST00000481641 HSPB8Q9UJY1 196 aa10.54□□□□□ -0.72
CLK1-211ENST00000481641 IGKCP01834 107 aa10.53□□□□□ -0.72
CLK1-211ENST00000481641 LGALS3P17931 250 aaKnown RBP10.53□□□□□ -0.72
CLK1-211ENST00000481641 HERVK_113P61574 105 aa10.53□□□□□ -0.72
CLK1-211ENST00000481641 LINC00483Q53H64 154 aa10.53□□□□□ -0.72
CLK1-211ENST00000481641 SLC7A5P1Q8MH63 180 aa10.53□□□□□ -0.72
CLK1-211ENST00000481641 S100A12P80511 92 aa10.52□□□□□ -0.73
CLK1-211ENST00000481641 Q9BRP9 147 aa10.52□□□□□ -0.73
CLK1-211ENST00000481641 IGLV9-49A0A0B4J1Y8 123 aa10.51□□□□□ -0.73
CLK1-211ENST00000481641 TRBV10-2A0A0K0K1G8 114 aa10.51□□□□□ -0.73
CLK1-211ENST00000481641 COLCA2A8K830 154 aa10.51□□□□□ -0.73
CLK1-211ENST00000481641 NPC2P61916 151 aa10.51□□□□□ -0.73
CLK1-211ENST00000481641 EIF4EBP3O60516 100 aaPredicted RBP10.5□□□□□ -0.73
CLK1-211ENST00000481641 NMUP48645 174 aa10.5□□□□□ -0.73
CLK1-211ENST00000481641 MOBPQ13875 183 aa10.5□□□□□ -0.73
CLK1-211ENST00000481641 SOSTDC1Q6X4U4 206 aa10.5□□□□□ -0.73
CLK1-211ENST00000481641 MIEN1Q9BRT3 115 aa10.5□□□□□ -0.73
CLK1-211ENST00000481641 SPANXB1Q9NS25 103 aaPredicted RBP10.5□□□□□ -0.73
CLK1-211ENST00000481641 ADAMTSL4-AS1Q5T5F5 129 aa10.49□□□□□ -0.73
CLK1-211ENST00000481641 LCE2AQ5TA79 106 aaPredicted RBP10.49□□□□□ -0.73
CLK1-211ENST00000481641 FP248Q71RG6 208 aaPredicted RBP10.49□□□□□ -0.73
CLK1-211ENST00000481641 IGLV6-57P01721 117 aa10.48□□□□□ -0.73
CLK1-211ENST00000481641 S100A7L2Q5SY68 101 aa10.48□□□□□ -0.73
CLK1-211ENST00000481641 Q6ZRX8 168 aa10.48□□□□□ -0.73
CLK1-211ENST00000481641 SPINK1P00995 79 aa10.47□□□□□ -0.73
CLK1-211ENST00000481641 A0A0J9YXY3 114 aa10.46□□□□□ -0.73
CLK1-211ENST00000481641 NDUFC2O95298 119 aa10.46□□□□□ -0.73
CLK1-211ENST00000481641 KRTAP13-3Q3SY46 172 aa10.46□□□□□ -0.73
CLK1-211ENST00000481641 TRAV23DV6A0A075B6W5 121 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms