RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 H0Y9J4 135 aa13.01□□□□□ -0.33
CCM2-214ENST00000481194 LINC00337Q8N6G1 96 aa13□□□□□ -0.33
CCM2-214ENST00000481194 C22orf24Q9Y442 160 aa13□□□□□ -0.33
CCM2-214ENST00000481194 NDUFV3P56181 108 aaKnown RBP13□□□□□ -0.33
CCM2-214ENST00000481194 TRBV7-6A0A0J9YX20 115 aa12.99□□□□□ -0.33
CCM2-214ENST00000481194 CCKP06307 115 aa12.97□□□□□ -0.33
CCM2-214ENST00000481194 LRCOL1A6NCL2 159 aa12.97□□□□□ -0.33
CCM2-214ENST00000481194 LINC00575Q6W349 94 aa12.97□□□□□ -0.33
CCM2-214ENST00000481194 LAMA1P25391 3075 aa12.96□□□□□ -0.33
CCM2-214ENST00000481194 C10orf25Q5T742 122 aa12.96□□□□□ -0.34
CCM2-214ENST00000481194 A0A087WYN8 130 aa12.95□□□□□ -0.34
CCM2-214ENST00000481194 C16orf90A8MZG2 172 aa12.95□□□□□ -0.34
CCM2-214ENST00000481194 C5orf47Q569G3 176 aa12.95□□□□□ -0.34
CCM2-214ENST00000481194 APLNQ9ULZ1 77 aa12.95□□□□□ -0.34
CCM2-214ENST00000481194 MT-ATP8P03928 68 aa12.93□□□□□ -0.34
CCM2-214ENST00000481194 UQCRQO14949 82 aa12.93□□□□□ -0.34
CCM2-214ENST00000481194 Q6JHZ5 121 aa12.93□□□□□ -0.34
CCM2-214ENST00000481194 RTL8CO15255 209 aa12.92□□□□□ -0.34
CCM2-214ENST00000481194 C1orf137Q5JT78 98 aa12.91□□□□□ -0.34
CCM2-214ENST00000481194 SDIM1Q6ZPB5 146 aa12.91□□□□□ -0.34
CCM2-214ENST00000481194 LITAFQ99732 161 aa12.9□□□□□ -0.34
CCM2-214ENST00000481194 UNC79Q9P2D8 2635 aa12.9□□□□□ -0.34
CCM2-214ENST00000481194 SOSTDC1Q6X4U4 206 aa12.9□□□□□ -0.34
CCM2-214ENST00000481194 A0A096LNI7 61 aa12.89□□□□□ -0.35
CCM2-214ENST00000481194 IMUPQ9GZP8 106 aa12.88□□□□□ -0.35
CCM2-214ENST00000481194 FAM240AA0A1B0GVK7 77 aa12.88□□□□□ -0.35
CCM2-214ENST00000481194 LINC00167Q96N53 147 aa12.88□□□□□ -0.35
CCM2-214ENST00000481194 A0A0C4DFX4 3053 aa12.87□□□□□ -0.35
CCM2-214ENST00000481194 IGKV4-1P06312 121 aa12.85□□□□□ -0.35
CCM2-214ENST00000481194 KIAA0087Q14695 138 aa12.84□□□□□ -0.35
CCM2-214ENST00000481194 C20orf197Q8N268 126 aa12.84□□□□□ -0.35
CCM2-214ENST00000481194 C15orf56Q8N910 161 aa12.84□□□□□ -0.35
CCM2-214ENST00000481194 IGLV9-49A0A0B4J1Y8 123 aa12.83□□□□□ -0.35
CCM2-214ENST00000481194 C3orf22Q8N5N4 141 aa12.83□□□□□ -0.36
CCM2-214ENST00000481194 ELOF1P60002 83 aaKnown RBP12.82□□□□□ -0.36
CCM2-214ENST00000481194 Q9BRP9 147 aa12.81□□□□□ -0.36
CCM2-214ENST00000481194 VPS13AQ96RL7 3174 aa12.81□□□□□ -0.36
CCM2-214ENST00000481194 TLX1NBP0CAT3 122 aa12.81□□□□□ -0.36
CCM2-214ENST00000481194 SEC61GP60059 68 aa12.8□□□□□ -0.36
CCM2-214ENST00000481194 Q6ZRP5 223 aa12.8□□□□□ -0.36
CCM2-214ENST00000481194 SCXQ7RTU7 201 aa12.8□□□□□ -0.36
CCM2-214ENST00000481194 SMCR5Q8TEV8 140 aa12.79□□□□□ -0.36
CCM2-214ENST00000481194 FAM236DA0A1B0GTK5 79 aa12.79□□□□□ -0.36
CCM2-214ENST00000481194 FAM236CP0DP71 79 aa12.79□□□□□ -0.36
CCM2-214ENST00000481194 VPREB1P12018 145 aa12.79□□□□□ -0.36
CCM2-214ENST00000481194 CENPEQ02224 2701 aa12.77□□□□□ -0.37
CCM2-214ENST00000481194 NDUFC1O43677 76 aa12.76□□□□□ -0.37
CCM2-214ENST00000481194 IGLV6-57P01721 117 aa12.76□□□□□ -0.37
CCM2-214ENST00000481194 PLA2G2DQ9UNK4 145 aa12.76□□□□□ -0.37
CCM2-214ENST00000481194 PRLHP81277 87 aa12.76□□□□□ -0.37
CCM2-214ENST00000481194 VCANP13611 3396 aa12.76□□□□□ -0.37
CCM2-214ENST00000481194 SERP2Q8N6R1 65 aa12.75□□□□□ -0.37
CCM2-214ENST00000481194 Q6ZRX8 168 aa12.75□□□□□ -0.37
CCM2-214ENST00000481194 ATP5EP56381 51 aaPredicted RBP12.75□□□□□ -0.37
CCM2-214ENST00000481194 DNAH14Q0VDD8 3507 aa12.74□□□□□ -0.37
CCM2-214ENST00000481194 A0A087WTM6 91 aa12.72□□□□□ -0.37
CCM2-214ENST00000481194 CNBPP62633 177 aaKnown RBP12.72□□□□□ -0.37
CCM2-214ENST00000481194 CASC2Q6XLA1 102 aa12.71□□□□□ -0.37
CCM2-214ENST00000481194 PHF5AQ7RTV0 110 aaKnown RBP12.71□□□□□ -0.37
CCM2-214ENST00000481194 LINC00336Q6ZUF6 198 aa12.7□□□□□ -0.38
CCM2-214ENST00000481194 CHD6Q8TD26 2715 aa12.7□□□□□ -0.38
CCM2-214ENST00000481194 A0A1B0GW54 56 aa12.69□□□□□ -0.38
CCM2-214ENST00000481194 EYSQ5T1H1 3165 aa12.69□□□□□ -0.38
CCM2-214ENST00000481194 BCE1O60756 84 aa12.69□□□□□ -0.38
CCM2-214ENST00000481194 C9orf163Q8N9P6 203 aa12.68□□□□□ -0.38
CCM2-214ENST00000481194 Q6Q795 121 aa12.68□□□□□ -0.38
CCM2-214ENST00000481194 HRCT1Q6UXD1 115 aa12.68□□□□□ -0.38
CCM2-214ENST00000481194 KCNQ1DNQ9H478 68 aa12.68□□□□□ -0.38
CCM2-214ENST00000481194 CFAP54Q96N23 3096 aa12.67□□□□□ -0.38
CCM2-214ENST00000481194 ATRQ13535 2644 aa12.67□□□□□ -0.38
CCM2-214ENST00000481194 IGLV1-50A0A075B6I6 118 aa12.66□□□□□ -0.38
CCM2-214ENST00000481194 XGP55808 180 aa12.66□□□□□ -0.38
CCM2-214ENST00000481194 COX7CP15954 63 aa12.65□□□□□ -0.38
CCM2-214ENST00000481194 CIRBP-AS1Q8TBR5 109 aa12.65□□□□□ -0.38
CCM2-214ENST00000481194 V9GYY9 64 aa12.64□□□□□ -0.39
CCM2-214ENST00000481194 FAM218AQ96MZ4 157 aa12.64□□□□□ -0.39
CCM2-214ENST00000481194 LIMD2Q9BT23 127 aa12.64□□□□□ -0.39
CCM2-214ENST00000481194 DMXL2Q8TDJ6 3036 aa12.63□□□□□ -0.39
CCM2-214ENST00000481194 SERTAD4-AS1Q5TG53 156 aa12.63□□□□□ -0.39
CCM2-214ENST00000481194 BRK1Q8WUW1 75 aa12.63□□□□□ -0.39
CCM2-214ENST00000481194 CHTF8P0CG12 524 aa12.62□□□□□ -0.39
CCM2-214ENST00000481194 FAM104AQ969W3 186 aa12.62□□□□□ -0.39
CCM2-214ENST00000481194 EPM2AB3EWF7 344 aa12.62□□□□□ -0.39
CCM2-214ENST00000481194 DMXL1Q9Y485 3027 aa12.62□□□□□ -0.39
CCM2-214ENST00000481194 LINC00476Q8WZB0 136 aa12.62□□□□□ -0.39
CCM2-214ENST00000481194 SPINK6Q6UWN8 80 aa12.61□□□□□ -0.39
CCM2-214ENST00000481194 WFDC13Q8IUB5 93 aa12.61□□□□□ -0.39
CCM2-214ENST00000481194 C9orf129Q5T035 196 aaKnown RBP12.6□□□□□ -0.39
CCM2-214ENST00000481194 KRTAP21-3Q3LHN1 58 aa12.6□□□□□ -0.39
CCM2-214ENST00000481194 BAHCC1Q9P281 2608 aa12.59□□□□□ -0.39
CCM2-214ENST00000481194 FAM229AH3BQW9 127 aa12.59□□□□□ -0.39
CCM2-214ENST00000481194 FRYQ5TBA9 3013 aa12.59□□□□□ -0.39
CCM2-214ENST00000481194 FAM168BA1KXE4 195 aa12.59□□□□□ -0.39
CCM2-214ENST00000481194 FLNCQ14315 2725 aa12.58□□□□□ -0.4
CCM2-214ENST00000481194 PRO0461Q9UI25 63 aa12.58□□□□□ -0.4
CCM2-214ENST00000481194 MPLKIPQ8TAP9 179 aa12.57□□□□□ -0.4
CCM2-214ENST00000481194 UBR5O95071 2799 aaPredicted RBP12.57□□□□□ -0.4
CCM2-214ENST00000481194 LOC110117498A0A087WWA1 95 aa12.57□□□□□ -0.4
CCM2-214ENST00000481194 IGLV5-37A0A075B6J1 123 aa12.57□□□□□ -0.4
CCM2-214ENST00000481194 PRR15LQ9BU68 103 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms