RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 PLNP26678 52 aa10.15□□□□□ -0.78
HSPG2-209ENST00000480900 HERV-K104P63124 156 aa10.15□□□□□ -0.78
HSPG2-209ENST00000480900 KRTAP13-1Q8IUC0 172 aa10.15□□□□□ -0.78
HSPG2-209ENST00000480900 UBE2AP49459 152 aa10.14□□□□□ -0.79
HSPG2-209ENST00000480900 Q8NDZ9 215 aa10.14□□□□□ -0.79
HSPG2-209ENST00000480900 NDUFA12Q9UI09 145 aa10.14□□□□□ -0.79
HSPG2-209ENST00000480900 A0A0U1RRA0 63 aa10.13□□□□□ -0.79
HSPG2-209ENST00000480900 FABP4P15090 132 aa10.13□□□□□ -0.79
HSPG2-209ENST00000480900 LRP2P98164 4655 aa10.13□□□□□ -0.79
HSPG2-209ENST00000480900 MYMXA0A1B0GTQ4 84 aa10.12□□□□□ -0.79
HSPG2-209ENST00000480900 LINC00587B1AMM8 73 aa10.12□□□□□ -0.79
HSPG2-209ENST00000480900 ATP6V1G1O75348 118 aa10.12□□□□□ -0.79
HSPG2-209ENST00000480900 SMIM13P0DJ93 91 aa10.12□□□□□ -0.79
HSPG2-209ENST00000480900 MEIG1Q5JSS6 88 aa10.12□□□□□ -0.79
HSPG2-209ENST00000480900 TMEM126AQ9H061 195 aa10.12□□□□□ -0.79
HSPG2-209ENST00000480900 DPM2O94777 84 aa10.11□□□□□ -0.79
HSPG2-209ENST00000480900 PLEKHB2Q96CS7 222 aa10.11□□□□□ -0.79
HSPG2-209ENST00000480900 UBR4Q5T4S7 5183 aa10.11□□□□□ -0.79
HSPG2-209ENST00000480900 TMEM238C9JI98 176 aa10.1□□□□□ -0.79
HSPG2-209ENST00000480900 LEPROTO15243 131 aa10.1□□□□□ -0.79
HSPG2-209ENST00000480900 M0R378 163 aa10.09□□□□□ -0.79
HSPG2-209ENST00000480900 TSPEAR-AS2P59090 65 aa10.09□□□□□ -0.79
HSPG2-209ENST00000480900 FAM19A1Q7Z5A9 133 aa10.09□□□□□ -0.79
HSPG2-209ENST00000480900 MIR7-3HGQ8N6C7 128 aa10.09□□□□□ -0.79
HSPG2-209ENST00000480900 MAP1LC3CQ9BXW4 147 aa10.09□□□□□ -0.79
HSPG2-209ENST00000480900 A0A087X002 238 aa10.08□□□□□ -0.8
HSPG2-209ENST00000480900 IGKCP01834 107 aa10.08□□□□□ -0.8
HSPG2-209ENST00000480900 CRYGAP11844 174 aa10.08□□□□□ -0.8
HSPG2-209ENST00000480900 HERVK_113P61574 105 aa10.08□□□□□ -0.8
HSPG2-209ENST00000480900 PRLHP81277 87 aa10.08□□□□□ -0.8
HSPG2-209ENST00000480900 BOD1L2Q8IYS8 172 aa10.07□□□□□ -0.8
HSPG2-209ENST00000480900 PMCHL2Q9BQD1 86 aa10.07□□□□□ -0.8
HSPG2-209ENST00000480900 J3QQQ9 107 aa10.06□□□□□ -0.8
HSPG2-209ENST00000480900 HIST1H2BKO60814 126 aa10.06□□□□□ -0.8
HSPG2-209ENST00000480900 HIST1H2BJP06899 126 aa10.06□□□□□ -0.8
HSPG2-209ENST00000480900 HIST1H2BOP23527 126 aa10.06□□□□□ -0.8
HSPG2-209ENST00000480900 HIST1H2BBP33778 126 aa10.06□□□□□ -0.8
HSPG2-209ENST00000480900 HIST1H2BDP58876 126 aa10.06□□□□□ -0.8
HSPG2-209ENST00000480900 HIST1H2BCP62807 126 aa10.06□□□□□ -0.8
HSPG2-209ENST00000480900 HIST2H2BEQ16778 126 aa10.06□□□□□ -0.8
HSPG2-209ENST00000480900 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.06□□□□□ -0.8
HSPG2-209ENST00000480900 HIST1H2BHQ93079 126 aa10.06□□□□□ -0.8
HSPG2-209ENST00000480900 HIST1H2BNQ99877 126 aa10.06□□□□□ -0.8
HSPG2-209ENST00000480900 HIST1H2BMQ99879 126 aa10.06□□□□□ -0.8
HSPG2-209ENST00000480900 NMUP48645 174 aa10.05□□□□□ -0.8
HSPG2-209ENST00000480900 FAM229BQ4G0N7 80 aa10.05□□□□□ -0.8
HSPG2-209ENST00000480900 IGKV2D-26A0A0A0MRZ7 120 aa10.04□□□□□ -0.8
HSPG2-209ENST00000480900 LOC107984156A0A0G2JMH3 177 aa10.03□□□□□ -0.8
HSPG2-209ENST00000480900 LGALS3P17931 250 aaKnown RBP10.03□□□□□ -0.8
HSPG2-209ENST00000480900 ARL17AQ8IVW1 177 aa10.03□□□□□ -0.8
HSPG2-209ENST00000480900 TYMSOSQ8TAI1 123 aa10.03□□□□□ -0.8
HSPG2-209ENST00000480900 PRYO14603 147 aa10.02□□□□□ -0.81
HSPG2-209ENST00000480900 NCR3O14931 201 aa10.02□□□□□ -0.81
HSPG2-209ENST00000480900 ANAPC11Q9NYG5 84 aa10.02□□□□□ -0.81
HSPG2-209ENST00000480900 SYS1-DBNDD2H3BUS1 97 aa10.01□□□□□ -0.81
HSPG2-209ENST00000480900 KRTAP13-2Q52LG2 175 aa10□□□□□ -0.81
HSPG2-209ENST00000480900 DAND5Q8N907 189 aa10□□□□□ -0.81
HSPG2-209ENST00000480900 KCNQ1DNQ9H478 68 aa10□□□□□ -0.81
HSPG2-209ENST00000480900 E9PLD3 99 aa9.99□□□□□ -0.81
HSPG2-209ENST00000480900 HIGD2AQ9BW72 106 aa9.99□□□□□ -0.81
HSPG2-209ENST00000480900 SPRR1AP35321 89 aa9.98□□□□□ -0.81
HSPG2-209ENST00000480900 LINC00337Q8N6G1 96 aa9.98□□□□□ -0.81
HSPG2-209ENST00000480900 TRBV10-3A0A0K0K1G6 114 aa9.97□□□□□ -0.81
HSPG2-209ENST00000480900 TRBV10-2A0A0K0K1G8 114 aa9.97□□□□□ -0.81
HSPG2-209ENST00000480900 LINC01545Q5VT33 79 aa9.97□□□□□ -0.81
HSPG2-209ENST00000480900 TSPAN13O95857 204 aa9.96□□□□□ -0.82
HSPG2-209ENST00000480900 S100A12P80511 92 aa9.96□□□□□ -0.82
HSPG2-209ENST00000480900 COA6Q5JTJ3 125 aaKnown RBP9.96□□□□□ -0.82
HSPG2-209ENST00000480900 PET117Q6UWS5 81 aa9.96□□□□□ -0.82
HSPG2-209ENST00000480900 MIEN1Q9BRT3 115 aa9.96□□□□□ -0.82
HSPG2-209ENST00000480900 A0A0J9YXY3 114 aa9.95□□□□□ -0.82
HSPG2-209ENST00000480900 KRTAP4-16G5E9R7 235 aaPredicted RBP9.95□□□□□ -0.82
HSPG2-209ENST00000480900 SPANXB1Q9NS25 103 aaPredicted RBP9.95□□□□□ -0.82
HSPG2-209ENST00000480900 ETDCA0A1B0GVM5 59 aa9.94□□□□□ -0.82
HSPG2-209ENST00000480900 NDUFC2O95298 119 aa9.94□□□□□ -0.82
HSPG2-209ENST00000480900 PRR4Q16378 134 aa9.94□□□□□ -0.82
HSPG2-209ENST00000480900 ZNF706Q9Y5V0 76 aaPredicted RBP9.94□□□□□ -0.82
HSPG2-209ENST00000480900 DDTP30046 118 aa9.93□□□□□ -0.82
HSPG2-209ENST00000480900 LINC00304Q8N9R0 145 aa9.93□□□□□ -0.82
HSPG2-209ENST00000480900 SPRR4Q96PI1 79 aa9.93□□□□□ -0.82
HSPG2-209ENST00000480900 C3orf79P0CE67 100 aa9.91□□□□□ -0.82
HSPG2-209ENST00000480900 ADAMTSL4-AS1Q5T5F5 129 aa9.91□□□□□ -0.82
HSPG2-209ENST00000480900 SOSTDC1Q6X4U4 206 aa9.9□□□□□ -0.82
HSPG2-209ENST00000480900 LPAP08519 4548 aa9.9□□□□□ -0.82
HSPG2-209ENST00000480900 IGLV6-57P01721 117 aa9.89□□□□□ -0.83
HSPG2-209ENST00000480900 CTAG1AP78358 180 aa9.89□□□□□ -0.83
HSPG2-209ENST00000480900 SMCR5Q8TEV8 140 aa9.89□□□□□ -0.83
HSPG2-209ENST00000480900 B5MCH6 92 aa9.88□□□□□ -0.83
HSPG2-209ENST00000480900 EIF4EBP3O60516 100 aaPredicted RBP9.88□□□□□ -0.83
HSPG2-209ENST00000480900 TIMM17BO60830 172 aa9.88□□□□□ -0.83
HSPG2-209ENST00000480900 NPC2P61916 151 aa9.88□□□□□ -0.83
HSPG2-209ENST00000480900 S100A7L2Q5SY68 101 aa9.88□□□□□ -0.83
HSPG2-209ENST00000480900 C3orf22Q8N5N4 141 aa9.88□□□□□ -0.83
HSPG2-209ENST00000480900 KRTDAPP60985 99 aa9.87□□□□□ -0.83
HSPG2-209ENST00000480900 LITAFQ99732 161 aa9.87□□□□□ -0.83
HSPG2-209ENST00000480900 ZNF815PA8K554 130 aa9.86□□□□□ -0.83
HSPG2-209ENST00000480900 Q6ZRX8 168 aa9.86□□□□□ -0.83
HSPG2-209ENST00000480900 C20orf202A1L168 122 aa9.85□□□□□ -0.83
HSPG2-209ENST00000480900 TRAV23DV6A0A075B6W5 121 aa9.84□□□□□ -0.83
HSPG2-209ENST00000480900 LINC00308Q8TCZ7 52 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms