RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 SOSTDC1Q6X4U4 206 aa6.8□□□□□ -1.32
VEGFA-212ENST00000480614 PRM2P04554 102 aa6.79□□□□□ -1.32
VEGFA-212ENST00000480614 COX6A2Q02221 97 aa6.79□□□□□ -1.32
VEGFA-212ENST00000480614 CDIP1Q9H305 208 aa6.79□□□□□ -1.32
VEGFA-212ENST00000480614 GAS8-AS1O95177 125 aa6.79□□□□□ -1.32
VEGFA-212ENST00000480614 SBSPONQ8IVN8 264 aa6.79□□□□□ -1.32
VEGFA-212ENST00000480614 A0A087WSZ3 146 aa6.79□□□□□ -1.32
VEGFA-212ENST00000480614 PCOTHQ58A44 107 aa6.79□□□□□ -1.32
VEGFA-212ENST00000480614 C1orf64Q8NEQ6 169 aa6.78□□□□□ -1.32
VEGFA-212ENST00000480614 MAP1AP78559 2803 aaPredicted RBP6.78□□□□□ -1.32
VEGFA-212ENST00000480614 VPREB1P12018 145 aa6.78□□□□□ -1.32
VEGFA-212ENST00000480614 ADAMTSL4-AS1Q5T5F5 129 aa6.78□□□□□ -1.32
VEGFA-212ENST00000480614 IGLV4-60A0A075B6I1 120 aa6.77□□□□□ -1.33
VEGFA-212ENST00000480614 LINC01546A6NGU7 62 aa6.77□□□□□ -1.33
VEGFA-212ENST00000480614 PSPHP1O15172 72 aa6.77□□□□□ -1.33
VEGFA-212ENST00000480614 Q6ZTC4 211 aa6.77□□□□□ -1.33
VEGFA-212ENST00000480614 TSPEAR-AS2P59090 65 aa6.77□□□□□ -1.33
VEGFA-212ENST00000480614 H3BPC8 53 aa6.76□□□□□ -1.33
VEGFA-212ENST00000480614 ACYP2P14621 99 aa6.76□□□□□ -1.33
VEGFA-212ENST00000480614 LYPD5Q6UWN5 251 aa6.76□□□□□ -1.33
VEGFA-212ENST00000480614 SPINK1P00995 79 aa6.75□□□□□ -1.33
VEGFA-212ENST00000480614 PRR3P79522 188 aaKnown RBP6.75□□□□□ -1.33
VEGFA-212ENST00000480614 ZNF292O60281 2723 aa6.75□□□□□ -1.33
VEGFA-212ENST00000480614 C7orf65Q6ZTY9 151 aa6.75□□□□□ -1.33
VEGFA-212ENST00000480614 IGKV2D-30A0A075B6S6 120 aa6.74□□□□□ -1.33
VEGFA-212ENST00000480614 IGKV2-30P06310 120 aa6.74□□□□□ -1.33
VEGFA-212ENST00000480614 RETNLBQ9BQ08 111 aa6.74□□□□□ -1.33
VEGFA-212ENST00000480614 URB1-AS1Q96HZ7 61 aa6.74□□□□□ -1.33
VEGFA-212ENST00000480614 A0A1B0GU69 56 aa6.73□□□□□ -1.33
VEGFA-212ENST00000480614 A0A087WVE0 104 aa6.73□□□□□ -1.33
VEGFA-212ENST00000480614 PRO3102Q9H379 93 aa6.73□□□□□ -1.33
VEGFA-212ENST00000480614 PRLHP81277 87 aa6.73□□□□□ -1.33
VEGFA-212ENST00000480614 IGLV5-39A0A0G2JS06 123 aa6.72□□□□□ -1.33
VEGFA-212ENST00000480614 SPAG11AQ6PDA7 123 aa6.72□□□□□ -1.33
VEGFA-212ENST00000480614 FHL3Q13643 280 aa6.71□□□□□ -1.33
VEGFA-212ENST00000480614 LINC00846Q9NV44 126 aa6.71□□□□□ -1.33
VEGFA-212ENST00000480614 AVPP01185 164 aa6.71□□□□□ -1.34
VEGFA-212ENST00000480614 C6orf48Q9UBA6 75 aa6.7□□□□□ -1.34
VEGFA-212ENST00000480614 SMCR5Q8TEV8 140 aa6.69□□□□□ -1.34
VEGFA-212ENST00000480614 A0A096LNJ9 63 aa6.69□□□□□ -1.34
VEGFA-212ENST00000480614 C22orf24Q9Y442 160 aa6.69□□□□□ -1.34
VEGFA-212ENST00000480614 KIF25-AS1Q9Y6Z4 181 aa6.69□□□□□ -1.34
VEGFA-212ENST00000480614 PRO0461Q9UI25 63 aa6.68□□□□□ -1.34
VEGFA-212ENST00000480614 MOBPQ13875 183 aa6.68□□□□□ -1.34
VEGFA-212ENST00000480614 KMT2BQ9UMN6 2715 aaPredicted RBP6.68□□□□□ -1.34
VEGFA-212ENST00000480614 COL4A2P08572 1712 aa6.68□□□□□ -1.34
VEGFA-212ENST00000480614 EDN2P20800 178 aa6.68□□□□□ -1.34
VEGFA-212ENST00000480614 Q6ZRU5 148 aa6.68□□□□□ -1.34
VEGFA-212ENST00000480614 TRAV22A0A0B4J277 110 aa6.67□□□□□ -1.34
VEGFA-212ENST00000480614 Q6ZSN1 163 aa6.67□□□□□ -1.34
VEGFA-212ENST00000480614 C11orf72Q8NBR9 251 aa6.67□□□□□ -1.34
VEGFA-212ENST00000480614 LOC110117498A0A087WWA1 95 aa6.67□□□□□ -1.34
VEGFA-212ENST00000480614 H3BNG1 76 aa6.67□□□□□ -1.34
VEGFA-212ENST00000480614 SERTAD4-AS1Q5TG53 156 aa6.66□□□□□ -1.34
VEGFA-212ENST00000480614 SPATA3Q8NHX4 192 aa6.66□□□□□ -1.34
VEGFA-212ENST00000480614 Q8NBF4 154 aa6.66□□□□□ -1.34
VEGFA-212ENST00000480614 KIAA0087Q14695 138 aa6.66□□□□□ -1.34
VEGFA-212ENST00000480614 IGHV3OR16-9A0A0B4J2B5 98 aa6.65□□□□□ -1.34
VEGFA-212ENST00000480614 IGLV5-45A0A087WSX0 123 aa6.65□□□□□ -1.35
VEGFA-212ENST00000480614 SMR3AQ99954 134 aa6.65□□□□□ -1.35
VEGFA-212ENST00000480614 DEFB116Q30KQ4 102 aa6.64□□□□□ -1.35
VEGFA-212ENST00000480614 UTP20O75691 2785 aaKnown RBP6.64□□□□□ -1.35
VEGFA-212ENST00000480614 ITPR2Q14571 2701 aa6.64□□□□□ -1.35
VEGFA-212ENST00000480614 SMIM29Q86T20 159 aa6.64□□□□□ -1.35
VEGFA-212ENST00000480614 ERC2-IT1O76042 136 aa6.64□□□□□ -1.35
VEGFA-212ENST00000480614 C8orf87E5RJ46 101 aa6.64□□□□□ -1.35
VEGFA-212ENST00000480614 CDSNQ15517 529 aa6.63□□□□□ -1.35
VEGFA-212ENST00000480614 Q6ZRP5 223 aa6.63□□□□□ -1.35
VEGFA-212ENST00000480614 A8MTW9 85 aa6.63□□□□□ -1.35
VEGFA-212ENST00000480614 FAM229AH3BQW9 127 aa6.62□□□□□ -1.35
VEGFA-212ENST00000480614 Q6ZRX8 168 aa6.62□□□□□ -1.35
VEGFA-212ENST00000480614 MDFIQ99750 246 aa6.62□□□□□ -1.35
VEGFA-212ENST00000480614 SPACA4Q8TDM5 124 aa6.62□□□□□ -1.35
VEGFA-212ENST00000480614 KRTAP10-9P60411 292 aa6.62□□□□□ -1.35
VEGFA-212ENST00000480614 LINC00167Q96N53 147 aa6.61□□□□□ -1.35
VEGFA-212ENST00000480614 LINC00313P59037 77 aa6.61□□□□□ -1.35
VEGFA-212ENST00000480614 ELOF1P60002 83 aaKnown RBP6.6□□□□□ -1.35
VEGFA-212ENST00000480614 C4orf26Q17RF5 130 aa6.6□□□□□ -1.35
VEGFA-212ENST00000480614 LOC101927531A0A1B0GV80 90 aa6.6□□□□□ -1.35
VEGFA-212ENST00000480614 ATP11AUNQ6ZP68 121 aa6.59□□□□□ -1.35
VEGFA-212ENST00000480614 C16orf90A8MZG2 172 aa6.59□□□□□ -1.35
VEGFA-212ENST00000480614 C10orf142B7Z368 130 aa6.59□□□□□ -1.35
VEGFA-212ENST00000480614 GVQW2A0A096LPI5 108 aaPredicted RBP6.59□□□□□ -1.36
VEGFA-212ENST00000480614 Q6ZQT0 140 aa6.58□□□□□ -1.36
VEGFA-212ENST00000480614 PLA2G1BP04054 148 aaKnown RBP6.58□□□□□ -1.36
VEGFA-212ENST00000480614 TYMSOSQ8TAI1 123 aa6.58□□□□□ -1.36
VEGFA-212ENST00000480614 FAM19A4Q96LR4 140 aa6.58□□□□□ -1.36
VEGFA-212ENST00000480614 TRBV7-4A0A0J9YYF1 115 aa6.58□□□□□ -1.36
VEGFA-212ENST00000480614 SMCPP49901 116 aaPredicted RBP6.58□□□□□ -1.36
VEGFA-212ENST00000480614 EPM2AB3EWF7 344 aa6.56□□□□□ -1.36
VEGFA-212ENST00000480614 LINC00476Q8WZB0 136 aa6.56□□□□□ -1.36
VEGFA-212ENST00000480614 Q9UF83 564 aa6.56□□□□□ -1.36
VEGFA-212ENST00000480614 CYP4F30PQ9H0H9 118 aa6.55□□□□□ -1.36
VEGFA-212ENST00000480614 NBDYA0A0U1RRE5 68 aa6.55□□□□□ -1.36
VEGFA-212ENST00000480614 A8MWP4 228 aa6.55□□□□□ -1.36
VEGFA-212ENST00000480614 RTL8CO15255 209 aa6.54□□□□□ -1.36
VEGFA-212ENST00000480614 A0A1W2PPR1 153 aa6.54□□□□□ -1.36
VEGFA-212ENST00000480614 DNAH10OSP0CZ25 163 aa6.53□□□□□ -1.36
VEGFA-212ENST00000480614 CD164Q04900 197 aa6.53□□□□□ -1.36
VEGFA-212ENST00000480614 SPINT4Q6UDR6 99 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms