RNA–Protein interactions for RNA: ENST00000480598.1

LIMS4-202, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-202ENST00000480598 A0A0U1RRA0 63 aa8.79□□□□□ -1
LIMS4-202ENST00000480598 HSBP1O75506 76 aa8.79□□□□□ -1
LIMS4-202ENST00000480598 LINC00158P58513 81 aa8.79□□□□□ -1
LIMS4-202ENST00000480598 PRLHP81277 87 aa8.79□□□□□ -1
LIMS4-202ENST00000480598 TRGC2P03986 189 aa8.78□□□□□ -1
LIMS4-202ENST00000480598 CRYGAP11844 174 aa8.78□□□□□ -1
LIMS4-202ENST00000480598 TMEM126AQ9H061 195 aa8.78□□□□□ -1
LIMS4-202ENST00000480598 TSPAN13O95857 204 aa8.77□□□□□ -1.01
LIMS4-202ENST00000480598 PRR4Q16378 134 aa8.77□□□□□ -1.01
LIMS4-202ENST00000480598 FAM19A1Q7Z5A9 133 aa8.77□□□□□ -1.01
LIMS4-202ENST00000480598 TYMSOSQ8TAI1 123 aa8.77□□□□□ -1.01
LIMS4-202ENST00000480598 H0Y8G0 127 aa8.76□□□□□ -1.01
LIMS4-202ENST00000480598 M0R378 163 aa8.76□□□□□ -1.01
LIMS4-202ENST00000480598 LINC00310P59036 64 aa8.76□□□□□ -1.01
LIMS4-202ENST00000480598 SMIM13P0DJ93 91 aa8.75□□□□□ -1.01
LIMS4-202ENST00000480598 KRTAP13-2Q52LG2 175 aa8.75□□□□□ -1.01
LIMS4-202ENST00000480598 SERF1AO75920 110 aa8.74□□□□□ -1.01
LIMS4-202ENST00000480598 SLC7A5P1Q8MH63 180 aa8.74□□□□□ -1.01
LIMS4-202ENST00000480598 MEIG1Q5JSS6 88 aa8.73□□□□□ -1.01
LIMS4-202ENST00000480598 LEPROTL1O95214 131 aa8.72□□□□□ -1.01
LIMS4-202ENST00000480598 FAM229BQ4G0N7 80 aa8.72□□□□□ -1.01
LIMS4-202ENST00000480598 MIR7-3HGQ8N6C7 128 aa8.72□□□□□ -1.01
LIMS4-202ENST00000480598 NDUFA12Q9UI09 145 aa8.72□□□□□ -1.01
LIMS4-202ENST00000480598 ATP6V1G1O75348 118 aa8.71□□□□□ -1.02
LIMS4-202ENST00000480598 TSPEAR-AS2P59090 65 aa8.71□□□□□ -1.02
LIMS4-202ENST00000480598 BOD1L2Q8IYS8 172 aa8.71□□□□□ -1.02
LIMS4-202ENST00000480598 NCR3O14931 201 aa8.7□□□□□ -1.02
LIMS4-202ENST00000480598 HERV-K104P63124 156 aa8.7□□□□□ -1.02
LIMS4-202ENST00000480598 HIGD2AQ9BW72 106 aa8.7□□□□□ -1.02
LIMS4-202ENST00000480598 FABP4P15090 132 aa8.69□□□□□ -1.02
LIMS4-202ENST00000480598 PLEKHB2Q96CS7 222 aa8.69□□□□□ -1.02
LIMS4-202ENST00000480598 IGKV2D-26A0A0A0MRZ7 120 aa8.68□□□□□ -1.02
LIMS4-202ENST00000480598 MYMXA0A1B0GTQ4 84 aa8.68□□□□□ -1.02
LIMS4-202ENST00000480598 COLCA2A8K830 154 aa8.68□□□□□ -1.02
LIMS4-202ENST00000480598 PMCHL2Q9BQD1 86 aa8.68□□□□□ -1.02
LIMS4-202ENST00000480598 LEPROTO15243 131 aa8.67□□□□□ -1.02
LIMS4-202ENST00000480598 LINC00304Q8N9R0 145 aa8.67□□□□□ -1.02
LIMS4-202ENST00000480598 HSPB8Q9UJY1 196 aa8.67□□□□□ -1.02
LIMS4-202ENST00000480598 PRYO14603 147 aa8.66□□□□□ -1.02
LIMS4-202ENST00000480598 PLNP26678 52 aa8.66□□□□□ -1.02
LIMS4-202ENST00000480598 DAND5Q8N907 189 aa8.66□□□□□ -1.02
LIMS4-202ENST00000480598 LINC00587B1AMM8 73 aa8.65□□□□□ -1.02
LIMS4-202ENST00000480598 DPM2O94777 84 aa8.65□□□□□ -1.02
LIMS4-202ENST00000480598 C3orf22Q8N5N4 141 aa8.65□□□□□ -1.02
LIMS4-202ENST00000480598 RETNLBQ9BQ08 111 aa8.65□□□□□ -1.02
LIMS4-202ENST00000480598 MAP1LC3CQ9BXW4 147 aa8.65□□□□□ -1.02
LIMS4-202ENST00000480598 TRBV10-3A0A0K0K1G6 114 aa8.64□□□□□ -1.03
LIMS4-202ENST00000480598 J3QQQ9 107 aa8.64□□□□□ -1.03
LIMS4-202ENST00000480598 SPRR4Q96PI1 79 aa8.64□□□□□ -1.03
LIMS4-202ENST00000480598 IGKCP01834 107 aa8.63□□□□□ -1.03
LIMS4-202ENST00000480598 SPRR1AP35321 89 aa8.63□□□□□ -1.03
LIMS4-202ENST00000480598 HERVK_113P61574 105 aa8.63□□□□□ -1.03
LIMS4-202ENST00000480598 KCNQ1DNQ9H478 68 aa8.63□□□□□ -1.03
LIMS4-202ENST00000480598 LINC00337Q8N6G1 96 aa8.62□□□□□ -1.03
LIMS4-202ENST00000480598 ETDCA0A1B0GVM5 59 aa8.61□□□□□ -1.03
LIMS4-202ENST00000480598 KRTAP4-16G5E9R7 235 aaPredicted RBP8.61□□□□□ -1.03
LIMS4-202ENST00000480598 LGALS3P17931 250 aaKnown RBP8.61□□□□□ -1.03
LIMS4-202ENST00000480598 SMCR5Q8TEV8 140 aa8.6□□□□□ -1.03
LIMS4-202ENST00000480598 LOC107984156A0A0G2JMH3 177 aa8.59□□□□□ -1.03
LIMS4-202ENST00000480598 NMUP48645 174 aa8.59□□□□□ -1.03
LIMS4-202ENST00000480598 ARL17AQ8IVW1 177 aa8.59□□□□□ -1.03
LIMS4-202ENST00000480598 ZNF706Q9Y5V0 76 aaPredicted RBP8.59□□□□□ -1.03
LIMS4-202ENST00000480598 PPDPFQ9H3Y8 114 aa8.58□□□□□ -1.04
LIMS4-202ENST00000480598 DDTP30046 118 aa8.57□□□□□ -1.04
LIMS4-202ENST00000480598 MIEN1Q9BRT3 115 aa8.57□□□□□ -1.04
LIMS4-202ENST00000480598 MUC2Q02817 5179 aa8.56□□□□□ -1.04
LIMS4-202ENST00000480598 TRBV10-2A0A0K0K1G8 114 aa8.56□□□□□ -1.04
LIMS4-202ENST00000480598 B5MCH6 92 aa8.56□□□□□ -1.04
LIMS4-202ENST00000480598 E9PLD3 99 aa8.56□□□□□ -1.04
LIMS4-202ENST00000480598 HIST1H2BKO60814 126 aa8.56□□□□□ -1.04
LIMS4-202ENST00000480598 HIST1H2BJP06899 126 aa8.56□□□□□ -1.04
LIMS4-202ENST00000480598 HIST1H2BOP23527 126 aa8.56□□□□□ -1.04
LIMS4-202ENST00000480598 HIST1H2BBP33778 126 aa8.56□□□□□ -1.04
LIMS4-202ENST00000480598 HIST1H2BDP58876 126 aa8.56□□□□□ -1.04
LIMS4-202ENST00000480598 NPC2P61916 151 aa8.56□□□□□ -1.04
LIMS4-202ENST00000480598 HIST1H2BCP62807 126 aa8.56□□□□□ -1.04
LIMS4-202ENST00000480598 S100A12P80511 92 aa8.56□□□□□ -1.04
LIMS4-202ENST00000480598 HIST2H2BEQ16778 126 aa8.56□□□□□ -1.04
LIMS4-202ENST00000480598 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.56□□□□□ -1.04
LIMS4-202ENST00000480598 SOSTDC1Q6X4U4 206 aa8.56□□□□□ -1.04
LIMS4-202ENST00000480598 HIST1H2BHQ93079 126 aa8.56□□□□□ -1.04
LIMS4-202ENST00000480598 HIST1H2BNQ99877 126 aa8.56□□□□□ -1.04
LIMS4-202ENST00000480598 HIST1H2BMQ99879 126 aa8.56□□□□□ -1.04
LIMS4-202ENST00000480598 SPANXB1Q9NS25 103 aaPredicted RBP8.56□□□□□ -1.04
LIMS4-202ENST00000480598 A0A0J9YXY3 114 aa8.55□□□□□ -1.04
LIMS4-202ENST00000480598 SYS1-DBNDD2H3BUS1 97 aa8.55□□□□□ -1.04
LIMS4-202ENST00000480598 EIF4EBP3O60516 100 aaPredicted RBP8.55□□□□□ -1.04
LIMS4-202ENST00000480598 ERC2-IT1O76042 136 aa8.55□□□□□ -1.04
LIMS4-202ENST00000480598 ADAMTSL4-AS1Q5T5F5 129 aa8.55□□□□□ -1.04
LIMS4-202ENST00000480598 IGLV7-46A0A075B6I9 117 aa8.53□□□□□ -1.04
LIMS4-202ENST00000480598 NDUFC2O95298 119 aa8.53□□□□□ -1.04
LIMS4-202ENST00000480598 CTAG1AP78358 180 aa8.53□□□□□ -1.04
LIMS4-202ENST00000480598 GAGE2AQ6NT46 116 aa8.53□□□□□ -1.04
LIMS4-202ENST00000480598 SPAG11AQ6PDA7 123 aa8.53□□□□□ -1.04
LIMS4-202ENST00000480598 Q8NBF4 154 aa8.53□□□□□ -1.04
LIMS4-202ENST00000480598 Q9BRP9 147 aa8.53□□□□□ -1.04
LIMS4-202ENST00000480598 IGLV6-57P01721 117 aa8.52□□□□□ -1.05
LIMS4-202ENST00000480598 LINC00483Q53H64 154 aa8.52□□□□□ -1.05
LIMS4-202ENST00000480598 S100A7L2Q5SY68 101 aa8.52□□□□□ -1.05
LIMS4-202ENST00000480598 Q6ZRX8 168 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms