RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 KRTAP4-1Q9BYQ7 146 aa6.45□□□□□ -1.38
TTC28-206ENST00000480563 A0A096LNJ9 63 aa6.44□□□□□ -1.38
TTC28-206ENST00000480563 TINCRA0A1B0GVN0 87 aa6.44□□□□□ -1.38
TTC28-206ENST00000480563 SERF1AO75920 110 aa6.44□□□□□ -1.38
TTC28-206ENST00000480563 CST9LQ9H4G1 147 aa6.44□□□□□ -1.38
TTC28-206ENST00000480563 IFI27L1Q96BM0 104 aa6.43□□□□□ -1.38
TTC28-206ENST00000480563 HSPB8Q9UJY1 196 aa6.43□□□□□ -1.38
TTC28-206ENST00000480563 IGLV5-37A0A075B6J1 123 aa6.42□□□□□ -1.38
TTC28-206ENST00000480563 LEPROTL1O95214 131 aa6.42□□□□□ -1.38
TTC28-206ENST00000480563 KRTAP13-3Q3SY46 172 aa6.42□□□□□ -1.38
TTC28-206ENST00000480563 FP248Q71RG6 208 aaPredicted RBP6.42□□□□□ -1.38
TTC28-206ENST00000480563 C3orf22Q8N5N4 141 aa6.42□□□□□ -1.38
TTC28-206ENST00000480563 CDKN2A-AS1Q9UH64 79 aa6.42□□□□□ -1.38
TTC28-206ENST00000480563 IGKV2-28A0A075B6P5 120 aa6.41□□□□□ -1.38
TTC28-206ENST00000480563 HIST1H2BKO60814 126 aa6.41□□□□□ -1.38
TTC28-206ENST00000480563 IGKV2D-28P01615 120 aa6.41□□□□□ -1.38
TTC28-206ENST00000480563 HIST1H2BJP06899 126 aa6.41□□□□□ -1.38
TTC28-206ENST00000480563 IGLC3P0DOY3 106 aa6.41□□□□□ -1.38
TTC28-206ENST00000480563 HIST1H2BOP23527 126 aa6.41□□□□□ -1.38
TTC28-206ENST00000480563 HIST1H2BBP33778 126 aa6.41□□□□□ -1.38
TTC28-206ENST00000480563 CXCL5P42830 114 aa6.41□□□□□ -1.38
TTC28-206ENST00000480563 HIST1H2BDP58876 126 aa6.41□□□□□ -1.38
TTC28-206ENST00000480563 HIST1H2BCP62807 126 aa6.41□□□□□ -1.38
TTC28-206ENST00000480563 PRLHP81277 87 aa6.41□□□□□ -1.38
TTC28-206ENST00000480563 HIST2H2BEQ16778 126 aa6.41□□□□□ -1.38
TTC28-206ENST00000480563 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.41□□□□□ -1.38
TTC28-206ENST00000480563 SPAG11AQ6PDA7 123 aa6.41□□□□□ -1.38
TTC28-206ENST00000480563 FAM19A2Q8N3H0 131 aa6.41□□□□□ -1.38
TTC28-206ENST00000480563 NKAPP1Q8N9T2 125 aa6.41□□□□□ -1.38
TTC28-206ENST00000480563 HIST1H2BHQ93079 126 aa6.41□□□□□ -1.38
TTC28-206ENST00000480563 HIST1H2BNQ99877 126 aa6.41□□□□□ -1.38
TTC28-206ENST00000480563 HIST1H2BMQ99879 126 aa6.41□□□□□ -1.38
TTC28-206ENST00000480563 CHTOPQ9Y3Y2 248 aaKnown RBP6.41□□□□□ -1.38
TTC28-206ENST00000480563 IGLV5-45A0A087WSX0 123 aa6.4□□□□□ -1.38
TTC28-206ENST00000480563 TRAV12-1A0A0B4J245 112 aa6.4□□□□□ -1.38
TTC28-206ENST00000480563 SEC61BP60468 96 aaKnown RBP6.4□□□□□ -1.38
TTC28-206ENST00000480563 H0Y8G0 127 aa6.39□□□□□ -1.39
TTC28-206ENST00000480563 FAM19A1Q7Z5A9 133 aa6.39□□□□□ -1.39
TTC28-206ENST00000480563 PLEKHB2Q96CS7 222 aa6.39□□□□□ -1.39
TTC28-206ENST00000480563 SMIM1B2RUZ4 78 aa6.38□□□□□ -1.39
TTC28-206ENST00000480563 SPINK8P0C7L1 97 aa6.38□□□□□ -1.39
TTC28-206ENST00000480563 C4orf48Q5BLP8 95 aa6.38□□□□□ -1.39
TTC28-206ENST00000480563 TMEM170BQ5T4T1 132 aa6.38□□□□□ -1.39
TTC28-206ENST00000480563 COX7B2Q8TF08 81 aa6.38□□□□□ -1.39
TTC28-206ENST00000480563 MAP1LC3CQ9BXW4 147 aa6.38□□□□□ -1.39
TTC28-206ENST00000480563 FABP4P15090 132 aa6.37□□□□□ -1.39
TTC28-206ENST00000480563 ZNF22P17026 224 aaPredicted RBP6.37□□□□□ -1.39
TTC28-206ENST00000480563 LINC00310P59036 64 aa6.37□□□□□ -1.39
TTC28-206ENST00000480563 TMEM126AQ9H061 195 aa6.37□□□□□ -1.39
TTC28-206ENST00000480563 C11orf86A6NJI1 115 aa6.36□□□□□ -1.39
TTC28-206ENST00000480563 TMEM238C9JI98 176 aa6.36□□□□□ -1.39
TTC28-206ENST00000480563 PLNP26678 52 aa6.36□□□□□ -1.39
TTC28-206ENST00000480563 SFTA2Q6UW10 78 aa6.36□□□□□ -1.39
TTC28-206ENST00000480563 LCE2CQ5TA81 110 aa6.35□□□□□ -1.39
TTC28-206ENST00000480563 M0R378 163 aa6.34□□□□□ -1.39
TTC28-206ENST00000480563 HERVK_113P61574 105 aa6.34□□□□□ -1.39
TTC28-206ENST00000480563 COA6Q5JTJ3 125 aaKnown RBP6.34□□□□□ -1.39
TTC28-206ENST00000480563 DPM2O94777 84 aa6.33□□□□□ -1.4
TTC28-206ENST00000480563 S100A6P06703 90 aa6.33□□□□□ -1.4
TTC28-206ENST00000480563 DAND5Q8N907 189 aa6.33□□□□□ -1.4
TTC28-206ENST00000480563 SPRR4Q96PI1 79 aa6.33□□□□□ -1.4
TTC28-206ENST00000480563 HIGD2AQ9BW72 106 aa6.33□□□□□ -1.4
TTC28-206ENST00000480563 IGLV5-39A0A0G2JS06 123 aa6.32□□□□□ -1.4
TTC28-206ENST00000480563 C20orf202A1L168 122 aa6.32□□□□□ -1.4
TTC28-206ENST00000480563 IGKCP01834 107 aa6.32□□□□□ -1.4
TTC28-206ENST00000480563 VPREB1P12018 145 aa6.32□□□□□ -1.4
TTC28-206ENST00000480563 Q8NBF4 154 aa6.32□□□□□ -1.4
TTC28-206ENST00000480563 TMEM223A0PJW6 202 aa6.31□□□□□ -1.4
TTC28-206ENST00000480563 SYS1-DBNDD2H3BUS1 97 aa6.31□□□□□ -1.4
TTC28-206ENST00000480563 SPINK1P00995 79 aa6.31□□□□□ -1.4
TTC28-206ENST00000480563 S100A2P29034 98 aa6.31□□□□□ -1.4
TTC28-206ENST00000480563 PFN2P35080 140 aa6.31□□□□□ -1.4
TTC28-206ENST00000480563 AKR1D1P51857 326 aa6.31□□□□□ -1.4
TTC28-206ENST00000480563 KRTDAPP60985 99 aa6.3□□□□□ -1.4
TTC28-206ENST00000480563 RPL24P83731 157 aaKnown RBP6.3□□□□□ -1.4
TTC28-206ENST00000480563 PET117Q6UWS5 81 aa6.3□□□□□ -1.4
TTC28-206ENST00000480563 CFC1BP0CG36 223 aa6.29□□□□□ -1.4
TTC28-206ENST00000480563 MT1HP80294 61 aa6.29□□□□□ -1.4
TTC28-206ENST00000480563 PMCHL2Q9BQD1 86 aa6.29□□□□□ -1.4
TTC28-206ENST00000480563 SND1-IT1Q9HBX3 110 aa6.29□□□□□ -1.4
TTC28-206ENST00000480563 LGALS3P17931 250 aaKnown RBP6.28□□□□□ -1.4
TTC28-206ENST00000480563 HERV-K104P63124 156 aa6.28□□□□□ -1.4
TTC28-206ENST00000480563 COX17Q14061 63 aa6.28□□□□□ -1.4
TTC28-206ENST00000480563 KRTAP19-2Q3LHN2 52 aa6.28□□□□□ -1.4
TTC28-206ENST00000480563 XP32Q5T750 250 aa6.28□□□□□ -1.4
TTC28-206ENST00000480563 NDUFA12Q9UI09 145 aa6.28□□□□□ -1.4
TTC28-206ENST00000480563 ERG28Q9UKR5 140 aa6.28□□□□□ -1.4
TTC28-206ENST00000480563 ZNF706Q9Y5V0 76 aaPredicted RBP6.28□□□□□ -1.4
TTC28-206ENST00000480563 MYMXA0A1B0GTQ4 84 aa6.27□□□□□ -1.41
TTC28-206ENST00000480563 LINC00587B1AMM8 73 aa6.27□□□□□ -1.41
TTC28-206ENST00000480563 LEPROTO15243 131 aa6.27□□□□□ -1.41
TTC28-206ENST00000480563 MEIG1Q5JSS6 88 aa6.27□□□□□ -1.41
TTC28-206ENST00000480563 Q8NDZ9 215 aa6.27□□□□□ -1.41
TTC28-206ENST00000480563 C3orf79P0CE67 100 aa6.26□□□□□ -1.41
TTC28-206ENST00000480563 NMUP48645 174 aa6.26□□□□□ -1.41
TTC28-206ENST00000480563 LINC01545Q5VT33 79 aa6.26□□□□□ -1.41
TTC28-206ENST00000480563 J3QQQ9 107 aa6.25□□□□□ -1.41
TTC28-206ENST00000480563 HIST3H2BBQ8N257 126 aa6.25□□□□□ -1.41
TTC28-206ENST00000480563 Q8N377 158 aa6.25□□□□□ -1.41
TTC28-206ENST00000480563 ZNF625Q96I27 306 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms