RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 LEPROTO15243 131 aa5.5□□□□□ -1.53
USP54-212ENST00000480210 DAND5Q8N907 189 aa5.5□□□□□ -1.53
USP54-212ENST00000480210 PPDPFQ9H3Y8 114 aa5.5□□□□□ -1.53
USP54-212ENST00000480210 DNAH17Q9UFH2 4485 aa5.5□□□□□ -1.53
USP54-212ENST00000480210 DNAH2Q9P225 4427 aa5.49□□□□□ -1.53
USP54-212ENST00000480210 IGLV4-3A0A075B6K6 122 aa5.49□□□□□ -1.53
USP54-212ENST00000480210 HERVK_113P63121 156 aa5.49□□□□□ -1.53
USP54-212ENST00000480210 CD164L2Q6UWJ8 174 aa5.49□□□□□ -1.53
USP54-212ENST00000480210 CHCHD10Q8WYQ3 142 aaPredicted RBP5.49□□□□□ -1.53
USP54-212ENST00000480210 AMELXQ99217 191 aa5.49□□□□□ -1.53
USP54-212ENST00000480210 DNAH10Q8IVF4 4471 aa5.49□□□□□ -1.53
USP54-212ENST00000480210 RYR3Q15413 4870 aa5.49□□□□□ -1.53
USP54-212ENST00000480210 FRAS1Q86XX4 4008 aa5.48□□□□□ -1.53
USP54-212ENST00000480210 A0A087WTM6 91 aa5.48□□□□□ -1.53
USP54-212ENST00000480210 IGKV3OR2-268A0A0C4DH90 116 aa5.48□□□□□ -1.53
USP54-212ENST00000480210 LRCOL1A6NCL2 159 aa5.48□□□□□ -1.53
USP54-212ENST00000480210 J3QQQ9 107 aa5.48□□□□□ -1.53
USP54-212ENST00000480210 BCE1O60756 84 aa5.48□□□□□ -1.53
USP54-212ENST00000480210 TIMM17BO60830 172 aa5.48□□□□□ -1.53
USP54-212ENST00000480210 TNP2Q05952 138 aa5.48□□□□□ -1.53
USP54-212ENST00000480210 S100A7L2Q5SY68 101 aa5.48□□□□□ -1.53
USP54-212ENST00000480210 CLPSL2Q6UWE3 100 aa5.48□□□□□ -1.53
USP54-212ENST00000480210 FAM19A5Q7Z5A7 132 aaPredicted RBP5.48□□□□□ -1.53
USP54-212ENST00000480210 FAM19A3Q7Z5A8 133 aa5.48□□□□□ -1.53
USP54-212ENST00000480210 TTTY13Q9BZ97 58 aa5.48□□□□□ -1.53
USP54-212ENST00000480210 TRAV13-1A0A0B4J241 112 aa5.47□□□□□ -1.53
USP54-212ENST00000480210 F8WDY8 70 aa5.47□□□□□ -1.53
USP54-212ENST00000480210 NDUFC2O95298 119 aa5.47□□□□□ -1.53
USP54-212ENST00000480210 KRTAP26-1Q6PEX3 210 aa5.47□□□□□ -1.53
USP54-212ENST00000480210 SDIM1Q6ZPB5 146 aa5.47□□□□□ -1.53
USP54-212ENST00000480210 LINC01561Q8N1V8 128 aa5.47□□□□□ -1.53
USP54-212ENST00000480210 FAM104AQ969W3 186 aa5.47□□□□□ -1.53
USP54-212ENST00000480210 IGLV10-54A0A075B6I4 117 aa5.46□□□□□ -1.54
USP54-212ENST00000480210 IGHV1-58A0A0C4DH39 117 aa5.46□□□□□ -1.54
USP54-212ENST00000480210 FAM236AA0A1B0GUQ0 79 aa5.46□□□□□ -1.54
USP54-212ENST00000480210 FAM236BA0A1B0GV22 79 aa5.46□□□□□ -1.54
USP54-212ENST00000480210 A4D1N5 150 aa5.46□□□□□ -1.54
USP54-212ENST00000480210 LST1O00453 97 aa5.46□□□□□ -1.54
USP54-212ENST00000480210 C5orf38Q86SI9 138 aa5.46□□□□□ -1.54
USP54-212ENST00000480210 A0A1B0GVY2 172 aa5.45□□□□□ -1.54
USP54-212ENST00000480210 COX7A2LO14548 114 aa5.45□□□□□ -1.54
USP54-212ENST00000480210 MALP21145 153 aa5.45□□□□□ -1.54
USP54-212ENST00000480210 XCL1P47992 114 aa5.45□□□□□ -1.54
USP54-212ENST00000480210 CIRBPQ14011 172 aaKnown RBP5.45□□□□□ -1.54
USP54-212ENST00000480210 Q8N814 137 aa5.45□□□□□ -1.54
USP54-212ENST00000480210 OPRPNQ99935 248 aaPredicted RBP5.45□□□□□ -1.54
USP54-212ENST00000480210 IGHV3OR16-9A0A0B4J2B5 98 aa5.44□□□□□ -1.54
USP54-212ENST00000480210 TEX49A0A1B0GTD5 131 aa5.44□□□□□ -1.54
USP54-212ENST00000480210 TINCRA0A1B0GVN0 87 aa5.44□□□□□ -1.54
USP54-212ENST00000480210 USP17L23D6RBM5 183 aa5.44□□□□□ -1.54
USP54-212ENST00000480210 RNASE13Q5GAN3 156 aaKnown RBP5.44□□□□□ -1.54
USP54-212ENST00000480210 LINC00242Q5T6M2 205 aa5.44□□□□□ -1.54
USP54-212ENST00000480210 ATP5EP2Q5VTU8 51 aa5.44□□□□□ -1.54
USP54-212ENST00000480210 SERP2Q8N6R1 65 aa5.44□□□□□ -1.54
USP54-212ENST00000480210 PRO0628Q9UI54 55 aa5.44□□□□□ -1.54
USP54-212ENST00000480210 PKIGQ9Y2B9 76 aa5.44□□□□□ -1.54
USP54-212ENST00000480210 A0A087WZ39 114 aa5.43□□□□□ -1.54
USP54-212ENST00000480210 TMEM223A0PJW6 202 aa5.43□□□□□ -1.54
USP54-212ENST00000480210 ZNF22P17026 224 aaPredicted RBP5.43□□□□□ -1.54
USP54-212ENST00000480210 HIST1H4AP62805 103 aaKnown RBP5.43□□□□□ -1.54
USP54-212ENST00000480210 GVQW2A0A096LPI5 108 aaPredicted RBP5.42□□□□□ -1.54
USP54-212ENST00000480210 ZNF561-AS1K7EIQ3 104 aa5.42□□□□□ -1.54
USP54-212ENST00000480210 RPL18AQ02543 176 aaKnown RBP5.42□□□□□ -1.54
USP54-212ENST00000480210 FAT2Q9NYQ8 4349 aa5.41□□□□□ -1.54
USP54-212ENST00000480210 IGLV4-69A0A075B6H9 119 aa5.41□□□□□ -1.54
USP54-212ENST00000480210 IGHV3-64A0A075B6Q5 118 aa5.41□□□□□ -1.54
USP54-212ENST00000480210 IGLV5-45A0A087WSX0 123 aa5.41□□□□□ -1.54
USP54-212ENST00000480210 IGLV5-52A0A0A0MRZ9 124 aa5.41□□□□□ -1.54
USP54-212ENST00000480210 ATP5EP56381 51 aaPredicted RBP5.41□□□□□ -1.54
USP54-212ENST00000480210 CNBPP62633 177 aaKnown RBP5.41□□□□□ -1.54
USP54-212ENST00000480210 MUSTN1Q8IVN3 82 aa5.41□□□□□ -1.54
USP54-212ENST00000480210 DPH3Q96FX2 82 aa5.41□□□□□ -1.54
USP54-212ENST00000480210 C2orf48Q96LS8 159 aa5.41□□□□□ -1.54
USP54-212ENST00000480210 LAMTOR3Q9UHA4 124 aa5.41□□□□□ -1.54
USP54-212ENST00000480210 A0A0J9YXV3 536 aa5.4□□□□□ -1.54
USP54-212ENST00000480210 TRIAP1O43715 76 aa5.4□□□□□ -1.54
USP54-212ENST00000480210 COX6A2Q02221 97 aa5.4□□□□□ -1.54
USP54-212ENST00000480210 Q6JHZ5 121 aa5.4□□□□□ -1.54
USP54-212ENST00000480210 C15orf56Q8N910 161 aa5.4□□□□□ -1.54
USP54-212ENST00000480210 C9orf163Q8N9P6 203 aa5.4□□□□□ -1.54
USP54-212ENST00000480210 TRBV10-3A0A0K0K1G6 114 aa5.39□□□□□ -1.55
USP54-212ENST00000480210 hADV29S1A0JD25 119 aa5.39□□□□□ -1.55
USP54-212ENST00000480210 C16orf90A8MZG2 172 aa5.39□□□□□ -1.55
USP54-212ENST00000480210 LECT2O14960 151 aa5.39□□□□□ -1.55
USP54-212ENST00000480210 PRSS2P07478 247 aa5.39□□□□□ -1.55
USP54-212ENST00000480210 NPC2P61916 151 aa5.39□□□□□ -1.55
USP54-212ENST00000480210 CDKN2A-AS1Q9UH64 79 aa5.39□□□□□ -1.55
USP54-212ENST00000480210 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.38□□□□□ -1.55
USP54-212ENST00000480210 NDUFC1O43677 76 aa5.38□□□□□ -1.55
USP54-212ENST00000480210 KRTAP10-2P60368 255 aa5.38□□□□□ -1.55
USP54-212ENST00000480210 SPAG11BQ08648 103 aa5.38□□□□□ -1.55
USP54-212ENST00000480210 SFTA2Q6UW10 78 aa5.38□□□□□ -1.55
USP54-212ENST00000480210 Q8IZM0 81 aa5.38□□□□□ -1.55
USP54-212ENST00000480210 DNAH11Q96DT5 4516 aa5.37□□□□□ -1.55
USP54-212ENST00000480210 NDUFA1O15239 70 aa5.37□□□□□ -1.55
USP54-212ENST00000480210 DNAL4O96015 105 aa5.37□□□□□ -1.55
USP54-212ENST00000480210 SYCNQ0VAF6 134 aa5.37□□□□□ -1.55
USP54-212ENST00000480210 HIGD2BQ4VC39 106 aa5.37□□□□□ -1.55
USP54-212ENST00000480210 C6orf226Q5I0X4 101 aa5.37□□□□□ -1.55
USP54-212ENST00000480210 CAMK2N2Q96S95 79 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms