RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 CBLN2Q8IUK8 224 aa4.21□□□□□ -1.74
COL17A1-205ENST00000480127 LINC00304Q8N9R0 145 aa4.21□□□□□ -1.74
COL17A1-205ENST00000480127 SND1-IT1Q9HBX3 110 aa4.21□□□□□ -1.74
COL17A1-205ENST00000480127 CHTOPQ9Y3Y2 248 aaKnown RBP4.21□□□□□ -1.74
COL17A1-205ENST00000480127 ZNF22P17026 224 aaPredicted RBP4.2□□□□□ -1.74
COL17A1-205ENST00000480127 SVBPQ8N300 66 aa4.2□□□□□ -1.74
COL17A1-205ENST00000480127 TMEM126AQ9H061 195 aa4.2□□□□□ -1.74
COL17A1-205ENST00000480127 CDIP1Q9H305 208 aa4.2□□□□□ -1.74
COL17A1-205ENST00000480127 ZNF706Q9Y5V0 76 aaPredicted RBP4.2□□□□□ -1.74
COL17A1-205ENST00000480127 IGLV5-37A0A075B6J1 123 aa4.19□□□□□ -1.74
COL17A1-205ENST00000480127 A0A087X002 238 aa4.19□□□□□ -1.74
COL17A1-205ENST00000480127 ETDCA0A1B0GVM5 59 aa4.19□□□□□ -1.74
COL17A1-205ENST00000480127 C11orf86A6NJI1 115 aa4.19□□□□□ -1.74
COL17A1-205ENST00000480127 TMEM238C9JI98 176 aa4.19□□□□□ -1.74
COL17A1-205ENST00000480127 HSBP1O75506 76 aa4.19□□□□□ -1.74
COL17A1-205ENST00000480127 C18orf32Q8TCD1 76 aa4.19□□□□□ -1.74
COL17A1-205ENST00000480127 MAP1LC3CQ9BXW4 147 aa4.19□□□□□ -1.74
COL17A1-205ENST00000480127 IGLV5-39A0A0G2JS06 123 aa4.18□□□□□ -1.74
COL17A1-205ENST00000480127 LINC01546A6NGU7 62 aa4.18□□□□□ -1.74
COL17A1-205ENST00000480127 LINC00587B1AMM8 73 aa4.18□□□□□ -1.74
COL17A1-205ENST00000480127 NCR3O14931 201 aa4.18□□□□□ -1.74
COL17A1-205ENST00000480127 FAM229BQ4G0N7 80 aa4.18□□□□□ -1.74
COL17A1-205ENST00000480127 BOD1L2Q8IYS8 172 aa4.18□□□□□ -1.74
COL17A1-205ENST00000480127 IFI27L1Q96BM0 104 aa4.18□□□□□ -1.74
COL17A1-205ENST00000480127 RETNLBQ9BQ08 111 aa4.18□□□□□ -1.74
COL17A1-205ENST00000480127 MIEN1Q9BRT3 115 aa4.18□□□□□ -1.74
COL17A1-205ENST00000480127 M0R378 163 aa4.17□□□□□ -1.74
COL17A1-205ENST00000480127 VPREB1P12018 145 aa4.17□□□□□ -1.74
COL17A1-205ENST00000480127 CHCHD1Q96BP2 118 aaKnown RBP4.17□□□□□ -1.74
COL17A1-205ENST00000480127 MYMXA0A1B0GTQ4 84 aa4.16□□□□□ -1.74
COL17A1-205ENST00000480127 SMIM13P0DJ93 91 aa4.16□□□□□ -1.74
COL17A1-205ENST00000480127 HERVK_113P61574 105 aa4.16□□□□□ -1.74
COL17A1-205ENST00000480127 IFITM2Q01629 132 aa4.16□□□□□ -1.74
COL17A1-205ENST00000480127 LINC00337Q8N6G1 96 aa4.16□□□□□ -1.74
COL17A1-205ENST00000480127 PPDPFQ9H3Y8 114 aa4.16□□□□□ -1.74
COL17A1-205ENST00000480127 IGLV7-46A0A075B6I9 117 aa4.15□□□□□ -1.75
COL17A1-205ENST00000480127 HERV-K104P63124 156 aa4.15□□□□□ -1.75
COL17A1-205ENST00000480127 S100A7L2Q5SY68 101 aa4.15□□□□□ -1.75
COL17A1-205ENST00000480127 NDUFA12Q9UI09 145 aa4.15□□□□□ -1.75
COL17A1-205ENST00000480127 A0A096LNJ9 63 aa4.14□□□□□ -1.75
COL17A1-205ENST00000480127 TRAV12-1A0A0B4J245 112 aa4.14□□□□□ -1.75
COL17A1-205ENST00000480127 TMEM223A0PJW6 202 aa4.14□□□□□ -1.75
COL17A1-205ENST00000480127 PRYO14603 147 aa4.14□□□□□ -1.75
COL17A1-205ENST00000480127 LGALS3P17931 250 aaKnown RBP4.14□□□□□ -1.75
COL17A1-205ENST00000480127 PLNP26678 52 aa4.14□□□□□ -1.75
COL17A1-205ENST00000480127 C10orf91Q5T1B1 145 aa4.14□□□□□ -1.75
COL17A1-205ENST00000480127 SPAG11AQ6PDA7 123 aa4.14□□□□□ -1.75
COL17A1-205ENST00000480127 FAM19A2Q8N3H0 131 aa4.14□□□□□ -1.75
COL17A1-205ENST00000480127 MIR7-3HGQ8N6C7 128 aa4.14□□□□□ -1.75
COL17A1-205ENST00000480127 IGLV9-49A0A0B4J1Y8 123 aa4.13□□□□□ -1.75
COL17A1-205ENST00000480127 LEPROTL1O95214 131 aa4.13□□□□□ -1.75
COL17A1-205ENST00000480127 FABP4P15090 132 aa4.13□□□□□ -1.75
COL17A1-205ENST00000480127 HINT1P49773 126 aaPredicted RBP4.13□□□□□ -1.75
COL17A1-205ENST00000480127 SMCPP49901 116 aaPredicted RBP4.13□□□□□ -1.75
COL17A1-205ENST00000480127 KRTAP13-2Q52LG2 175 aa4.13□□□□□ -1.75
COL17A1-205ENST00000480127 PLEKHB2Q96CS7 222 aa4.13□□□□□ -1.75
COL17A1-205ENST00000480127 HSPB8Q9UJY1 196 aa4.13□□□□□ -1.75
COL17A1-205ENST00000480127 DDTP30046 118 aa4.12□□□□□ -1.75
COL17A1-205ENST00000480127 C9orf153Q5TBE3 101 aa4.12□□□□□ -1.75
COL17A1-205ENST00000480127 GAGE2AQ6NT46 116 aa4.12□□□□□ -1.75
COL17A1-205ENST00000480127 KRTAP13-1Q8IUC0 172 aa4.12□□□□□ -1.75
COL17A1-205ENST00000480127 C3orf22Q8N5N4 141 aa4.12□□□□□ -1.75
COL17A1-205ENST00000480127 URB1-AS1Q96HZ7 61 aa4.12□□□□□ -1.75
COL17A1-205ENST00000480127 TRBV10-3A0A0K0K1G6 114 aa4.11□□□□□ -1.75
COL17A1-205ENST00000480127 DPM2O94777 84 aa4.11□□□□□ -1.75
COL17A1-205ENST00000480127 NPC2P61916 151 aa4.11□□□□□ -1.75
COL17A1-205ENST00000480127 JOSD1Q15040 202 aaPredicted RBP4.11□□□□□ -1.75
COL17A1-205ENST00000480127 DAND5Q8N907 189 aa4.11□□□□□ -1.75
COL17A1-205ENST00000480127 Q8NBF4 154 aa4.11□□□□□ -1.75
COL17A1-205ENST00000480127 SPRR4Q96PI1 79 aa4.11□□□□□ -1.75
COL17A1-205ENST00000480127 FSIP2Q5CZC0 6907 aa4.1□□□□□ -1.75
COL17A1-205ENST00000480127 J3QQQ9 107 aa4.1□□□□□ -1.75
COL17A1-205ENST00000480127 LEPROTO15243 131 aa4.1□□□□□ -1.75
COL17A1-205ENST00000480127 TRGC2P03986 189 aa4.1□□□□□ -1.75
COL17A1-205ENST00000480127 OR13C6PQ8NH95 151 aa4.1□□□□□ -1.75
COL17A1-205ENST00000480127 SMCR5Q8TEV8 140 aa4.1□□□□□ -1.75
COL17A1-205ENST00000480127 PMCHL2Q9BQD1 86 aa4.1□□□□□ -1.75
COL17A1-205ENST00000480127 CBY1Q9Y3M2 126 aa4.1□□□□□ -1.75
COL17A1-205ENST00000480127 SERF1AO75920 110 aa4.09□□□□□ -1.75
COL17A1-205ENST00000480127 IGKCP01834 107 aa4.09□□□□□ -1.75
COL17A1-205ENST00000480127 NMUP48645 174 aa4.09□□□□□ -1.75
COL17A1-205ENST00000480127 MOBPQ13875 183 aa4.09□□□□□ -1.75
COL17A1-205ENST00000480127 TPRXLQ17RH7 258 aa4.09□□□□□ -1.75
COL17A1-205ENST00000480127 Q8NDZ9 215 aa4.09□□□□□ -1.75
COL17A1-205ENST00000480127 KCNQ1DNQ9H478 68 aa4.09□□□□□ -1.75
COL17A1-205ENST00000480127 SPANXB1Q9NS25 103 aaPredicted RBP4.09□□□□□ -1.75
COL17A1-205ENST00000480127 MUC17Q685J3 4493 aa4.09□□□□□ -1.76
COL17A1-205ENST00000480127 TRAV23DV6A0A075B6W5 121 aa4.08□□□□□ -1.76
COL17A1-205ENST00000480127 CTAG1AP78358 180 aa4.08□□□□□ -1.76
COL17A1-205ENST00000480127 LCE2CQ5TA81 110 aa4.08□□□□□ -1.76
COL17A1-205ENST00000480127 FP248Q71RG6 208 aaPredicted RBP4.08□□□□□ -1.76
COL17A1-205ENST00000480127 CRCT1Q9UGL9 99 aa4.08□□□□□ -1.76
COL17A1-205ENST00000480127 SPINK1P00995 79 aa4.07□□□□□ -1.76
COL17A1-205ENST00000480127 TRBV10-2A0A0K0K1G8 114 aa4.06□□□□□ -1.76
COL17A1-205ENST00000480127 SLC25A34Q6PIV7 304 aa4.06□□□□□ -1.76
COL17A1-205ENST00000480127 B5MCH6 92 aa4.05□□□□□ -1.76
COL17A1-205ENST00000480127 SLC25A20O43772 301 aa4.05□□□□□ -1.76
COL17A1-205ENST00000480127 ZNF73O43830 326 aaPredicted RBP4.05□□□□□ -1.76
COL17A1-205ENST00000480127 TSPEAR-AS2P59090 65 aa4.05□□□□□ -1.76
COL17A1-205ENST00000480127 Q6ZRX8 168 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms