RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 TRAPPC1Q9Y5R8 145 aa3.89□□□□□ -1.79
FN1-220ENST00000480024 M0R378 163 aa3.88□□□□□ -1.79
FN1-220ENST00000480024 LINC00614P0C842 121 aa3.88□□□□□ -1.79
FN1-220ENST00000480024 COX17Q14061 63 aa3.88□□□□□ -1.79
FN1-220ENST00000480024 BAGE3Q86Y29 109 aa3.88□□□□□ -1.79
FN1-220ENST00000480024 HIGD2AQ9BW72 106 aa3.88□□□□□ -1.79
FN1-220ENST00000480024 MUC17Q685J3 4493 aa3.87□□□□□ -1.79
FN1-220ENST00000480024 A0A0U1RRA0 63 aa3.87□□□□□ -1.79
FN1-220ENST00000480024 LINC00158P58513 81 aa3.87□□□□□ -1.79
FN1-220ENST00000480024 C10orf91Q5T1B1 145 aa3.87□□□□□ -1.79
FN1-220ENST00000480024 SFTA2Q6UW10 78 aa3.87□□□□□ -1.79
FN1-220ENST00000480024 CBLN2Q8IUK8 224 aa3.87□□□□□ -1.79
FN1-220ENST00000480024 C3orf22Q8N5N4 141 aa3.87□□□□□ -1.79
FN1-220ENST00000480024 PLEKHB2Q96CS7 222 aa3.86□□□□□ -1.79
FN1-220ENST00000480024 CDIP1Q9H305 208 aa3.86□□□□□ -1.79
FN1-220ENST00000480024 CHTOPQ9Y3Y2 248 aaKnown RBP3.86□□□□□ -1.79
FN1-220ENST00000480024 IGLV7-46A0A075B6I9 117 aa3.85□□□□□ -1.79
FN1-220ENST00000480024 TMEM223A0PJW6 202 aa3.85□□□□□ -1.79
FN1-220ENST00000480024 NCR3O14931 201 aa3.85□□□□□ -1.79
FN1-220ENST00000480024 APOC3P02656 99 aa3.85□□□□□ -1.79
FN1-220ENST00000480024 ATP6V1G1O75348 118 aa3.84□□□□□ -1.79
FN1-220ENST00000480024 SMIM13P0DJ93 91 aa3.84□□□□□ -1.79
FN1-220ENST00000480024 TPRXLQ17RH7 258 aa3.84□□□□□ -1.79
FN1-220ENST00000480024 MEIG1Q5JSS6 88 aa3.84□□□□□ -1.79
FN1-220ENST00000480024 BOD1L2Q8IYS8 172 aa3.84□□□□□ -1.79
FN1-220ENST00000480024 IFI27L1Q96BM0 104 aa3.84□□□□□ -1.79
FN1-220ENST00000480024 SPRR4Q96PI1 79 aa3.84□□□□□ -1.79
FN1-220ENST00000480024 TRAV12-1A0A0B4J245 112 aa3.83□□□□□ -1.8
FN1-220ENST00000480024 H0Y8G0 127 aa3.83□□□□□ -1.8
FN1-220ENST00000480024 PRYO14603 147 aa3.83□□□□□ -1.8
FN1-220ENST00000480024 NDUFA5Q16718 116 aa3.83□□□□□ -1.8
FN1-220ENST00000480024 SVBPQ8N300 66 aa3.83□□□□□ -1.8
FN1-220ENST00000480024 MIR7-3HGQ8N6C7 128 aa3.83□□□□□ -1.8
FN1-220ENST00000480024 ZNF706Q9Y5V0 76 aaPredicted RBP3.83□□□□□ -1.8
FN1-220ENST00000480024 ETDCA0A1B0GVM5 59 aa3.82□□□□□ -1.8
FN1-220ENST00000480024 SNAPINO95295 136 aa3.82□□□□□ -1.8
FN1-220ENST00000480024 DAND5Q8N907 189 aa3.82□□□□□ -1.8
FN1-220ENST00000480024 Q8NBF4 154 aa3.82□□□□□ -1.8
FN1-220ENST00000480024 CHCHD1Q96BP2 118 aaKnown RBP3.82□□□□□ -1.8
FN1-220ENST00000480024 PPDPFQ9H3Y8 114 aa3.82□□□□□ -1.8
FN1-220ENST00000480024 NDUFA12Q9UI09 145 aa3.82□□□□□ -1.8
FN1-220ENST00000480024 TRBV10-3A0A0K0K1G6 114 aa3.81□□□□□ -1.8
FN1-220ENST00000480024 TSPEAR-AS2P59090 65 aa3.81□□□□□ -1.8
FN1-220ENST00000480024 HERV-K104P63124 156 aa3.81□□□□□ -1.8
FN1-220ENST00000480024 CTAG1AP78358 180 aa3.81□□□□□ -1.8
FN1-220ENST00000480024 C4orf48Q5BLP8 95 aa3.81□□□□□ -1.8
FN1-220ENST00000480024 SPAG11AQ6PDA7 123 aa3.81□□□□□ -1.8
FN1-220ENST00000480024 FAM19A2Q8N3H0 131 aa3.81□□□□□ -1.8
FN1-220ENST00000480024 YPEL4Q96NS1 127 aa3.81□□□□□ -1.8
FN1-220ENST00000480024 MYMXA0A1B0GTQ4 84 aa3.8□□□□□ -1.8
FN1-220ENST00000480024 HSBP1O75506 76 aa3.8□□□□□ -1.8
FN1-220ENST00000480024 SPRR1AP35321 89 aa3.8□□□□□ -1.8
FN1-220ENST00000480024 LCE2AQ5TA79 106 aaPredicted RBP3.8□□□□□ -1.8
FN1-220ENST00000480024 LINC00337Q8N6G1 96 aa3.8□□□□□ -1.8
FN1-220ENST00000480024 SMCR5Q8TEV8 140 aa3.8□□□□□ -1.8
FN1-220ENST00000480024 MAP1LC3CQ9BXW4 147 aa3.8□□□□□ -1.8
FN1-220ENST00000480024 KRTAP9-2Q9BYQ4 174 aa3.8□□□□□ -1.8
FN1-220ENST00000480024 KCNQ1DNQ9H478 68 aa3.8□□□□□ -1.8
FN1-220ENST00000480024 IGLV9-49A0A0B4J1Y8 123 aa3.79□□□□□ -1.8
FN1-220ENST00000480024 LINC00587B1AMM8 73 aa3.79□□□□□ -1.8
FN1-220ENST00000480024 KRTAP4-16G5E9R7 235 aaPredicted RBP3.79□□□□□ -1.8
FN1-220ENST00000480024 S100A12P80511 92 aa3.79□□□□□ -1.8
FN1-220ENST00000480024 MOBPQ13875 183 aa3.79□□□□□ -1.8
FN1-220ENST00000480024 GAGE2AQ6NT46 116 aa3.79□□□□□ -1.8
FN1-220ENST00000480024 FP248Q71RG6 208 aaPredicted RBP3.79□□□□□ -1.8
FN1-220ENST00000480024 B5MCH6 92 aa3.78□□□□□ -1.8
FN1-220ENST00000480024 ERC2-IT1O76042 136 aa3.78□□□□□ -1.8
FN1-220ENST00000480024 DDTP30046 118 aa3.78□□□□□ -1.8
FN1-220ENST00000480024 KRTAP13-3Q3SY46 172 aa3.78□□□□□ -1.8
FN1-220ENST00000480024 LINC00483Q53H64 154 aa3.78□□□□□ -1.8
FN1-220ENST00000480024 PMCHL2Q9BQD1 86 aa3.78□□□□□ -1.8
FN1-220ENST00000480024 MIEN1Q9BRT3 115 aa3.78□□□□□ -1.8
FN1-220ENST00000480024 J3QQQ9 107 aa3.77□□□□□ -1.81
FN1-220ENST00000480024 LEPROTO15243 131 aa3.77□□□□□ -1.81
FN1-220ENST00000480024 SERF1AO75920 110 aa3.77□□□□□ -1.81
FN1-220ENST00000480024 LEPROTL1O95214 131 aa3.77□□□□□ -1.81
FN1-220ENST00000480024 SPINK1P00995 79 aa3.77□□□□□ -1.81
FN1-220ENST00000480024 TRGC2P03986 189 aa3.77□□□□□ -1.81
FN1-220ENST00000480024 LGALS3P17931 250 aaKnown RBP3.77□□□□□ -1.81
FN1-220ENST00000480024 PLNP26678 52 aa3.77□□□□□ -1.81
FN1-220ENST00000480024 LINC00310P59036 64 aa3.77□□□□□ -1.81
FN1-220ENST00000480024 Q9BRP9 147 aa3.77□□□□□ -1.81
FN1-220ENST00000480024 SPANXB1Q9NS25 103 aaPredicted RBP3.77□□□□□ -1.81
FN1-220ENST00000480024 TRBV10-2A0A0K0K1G8 114 aa3.76□□□□□ -1.81
FN1-220ENST00000480024 DPM2O94777 84 aa3.76□□□□□ -1.81
FN1-220ENST00000480024 FABP4P15090 132 aa3.76□□□□□ -1.81
FN1-220ENST00000480024 HERVK_113P61574 105 aa3.76□□□□□ -1.81
FN1-220ENST00000480024 NPC2P61916 151 aa3.76□□□□□ -1.81
FN1-220ENST00000480024 S100A7L2Q5SY68 101 aa3.76□□□□□ -1.81
FN1-220ENST00000480024 Q6ZRX8 168 aa3.76□□□□□ -1.81
FN1-220ENST00000480024 TRAV23DV6A0A075B6W5 121 aa3.75□□□□□ -1.81
FN1-220ENST00000480024 LOC107984156A0A0G2JMH3 177 aa3.75□□□□□ -1.81
FN1-220ENST00000480024 IGKCP01834 107 aa3.75□□□□□ -1.81
FN1-220ENST00000480024 NMUP48645 174 aa3.75□□□□□ -1.81
FN1-220ENST00000480024 C9orf153Q5TBE3 101 aa3.75□□□□□ -1.81
FN1-220ENST00000480024 ARL17AQ8IVW1 177 aa3.75□□□□□ -1.81
FN1-220ENST00000480024 HSPB8Q9UJY1 196 aa3.75□□□□□ -1.81
FN1-220ENST00000480024 NDUFC2O95298 119 aa3.74□□□□□ -1.81
FN1-220ENST00000480024 IGLV6-57P01721 117 aa3.74□□□□□ -1.81
FN1-220ENST00000480024 ASB16-AS1Q495Z4 193 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 163 ms