RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 CHTOPQ9Y3Y2 248 aaKnown RBP10.17□□□□□ -0.78
ECHDC1-216ENST00000479525 SNAPINO95295 136 aa10.16□□□□□ -0.78
ECHDC1-216ENST00000479525 SVBPQ8N300 66 aa10.16□□□□□ -0.78
ECHDC1-216ENST00000479525 M0R378 163 aa10.14□□□□□ -0.79
ECHDC1-216ENST00000479525 LINC00158P58513 81 aa10.14□□□□□ -0.79
ECHDC1-216ENST00000479525 FAM19A2Q8N3H0 131 aa10.13□□□□□ -0.79
ECHDC1-216ENST00000479525 C3orf22Q8N5N4 141 aa10.13□□□□□ -0.79
ECHDC1-216ENST00000479525 YPEL4Q96NS1 127 aa10.13□□□□□ -0.79
ECHDC1-216ENST00000479525 MUC2Q02817 5179 aa10.13□□□□□ -0.79
ECHDC1-216ENST00000479525 TMEM223A0PJW6 202 aa10.12□□□□□ -0.79
ECHDC1-216ENST00000479525 H0Y8G0 127 aa10.12□□□□□ -0.79
ECHDC1-216ENST00000479525 LCE2BO14633 110 aa10.12□□□□□ -0.79
ECHDC1-216ENST00000479525 RPL24P83731 157 aaKnown RBP10.12□□□□□ -0.79
ECHDC1-216ENST00000479525 IFI27L1Q96BM0 104 aa10.12□□□□□ -0.79
ECHDC1-216ENST00000479525 HIGD2AQ9BW72 106 aa10.12□□□□□ -0.79
ECHDC1-216ENST00000479525 SMIM13P0DJ93 91 aa10.11□□□□□ -0.79
ECHDC1-216ENST00000479525 COX17Q14061 63 aa10.11□□□□□ -0.79
ECHDC1-216ENST00000479525 NCR3O14931 201 aa10.1□□□□□ -0.79
ECHDC1-216ENST00000479525 CBLN2Q8IUK8 224 aa10.1□□□□□ -0.79
ECHDC1-216ENST00000479525 LINC00304Q8N9R0 145 aa10.1□□□□□ -0.79
ECHDC1-216ENST00000479525 IGKV2D-26A0A0A0MRZ7 120 aa10.09□□□□□ -0.79
ECHDC1-216ENST00000479525 MEIG1Q5JSS6 88 aa10.08□□□□□ -0.8
ECHDC1-216ENST00000479525 FAM229BQ4G0N7 80 aa10.07□□□□□ -0.8
ECHDC1-216ENST00000479525 PLEKHB2Q96CS7 222 aa10.07□□□□□ -0.8
ECHDC1-216ENST00000479525 SLC7A5P1Q8MH63 180 aa10.06□□□□□ -0.8
ECHDC1-216ENST00000479525 CHCHD1Q96BP2 118 aaKnown RBP10.06□□□□□ -0.8
ECHDC1-216ENST00000479525 TRAV12-1A0A0B4J245 112 aa10.05□□□□□ -0.8
ECHDC1-216ENST00000479525 BOD1L2Q8IYS8 172 aa10.05□□□□□ -0.8
ECHDC1-216ENST00000479525 MIR7-3HGQ8N6C7 128 aa10.05□□□□□ -0.8
ECHDC1-216ENST00000479525 HSBP1O75506 76 aa10.04□□□□□ -0.8
ECHDC1-216ENST00000479525 TSPEAR-AS2P59090 65 aa10.04□□□□□ -0.8
ECHDC1-216ENST00000479525 ATP6V1G1O75348 118 aa10.03□□□□□ -0.8
ECHDC1-216ENST00000479525 DAND5Q8N907 189 aa10.03□□□□□ -0.8
ECHDC1-216ENST00000479525 LINC00310P59036 64 aa10.02□□□□□ -0.8
ECHDC1-216ENST00000479525 PPDPFQ9H3Y8 114 aa10.02□□□□□ -0.8
ECHDC1-216ENST00000479525 TRGC2P03986 189 aa10.01□□□□□ -0.81
ECHDC1-216ENST00000479525 SFTA2Q6UW10 78 aa10.01□□□□□ -0.81
ECHDC1-216ENST00000479525 PMCHL2Q9BQD1 86 aa10.01□□□□□ -0.81
ECHDC1-216ENST00000479525 NDUFA12Q9UI09 145 aa10.01□□□□□ -0.81
ECHDC1-216ENST00000479525 SPRR4Q96PI1 79 aa10.01□□□□□ -0.81
ECHDC1-216ENST00000479525 MUC17Q685J3 4493 aa10□□□□□ -0.81
ECHDC1-216ENST00000479525 SERF1AO75920 110 aa10□□□□□ -0.81
ECHDC1-216ENST00000479525 TRBV10-3A0A0K0K1G6 114 aa9.99□□□□□ -0.81
ECHDC1-216ENST00000479525 PRYO14603 147 aa9.98□□□□□ -0.81
ECHDC1-216ENST00000479525 FABP4P15090 132 aa9.98□□□□□ -0.81
ECHDC1-216ENST00000479525 SMCR5Q8TEV8 140 aa9.98□□□□□ -0.81
ECHDC1-216ENST00000479525 IGLV7-46A0A075B6I9 117 aa9.97□□□□□ -0.81
ECHDC1-216ENST00000479525 LEPROTL1O95214 131 aa9.96□□□□□ -0.82
ECHDC1-216ENST00000479525 MYMXA0A1B0GTQ4 84 aa9.95□□□□□ -0.82
ECHDC1-216ENST00000479525 ETDCA0A1B0GVM5 59 aa9.95□□□□□ -0.82
ECHDC1-216ENST00000479525 HERV-K104P63124 156 aa9.95□□□□□ -0.82
ECHDC1-216ENST00000479525 CDIP1Q9H305 208 aa9.95□□□□□ -0.82
ECHDC1-216ENST00000479525 LEPROTO15243 131 aa9.94□□□□□ -0.82
ECHDC1-216ENST00000479525 NPC2P61916 151 aa9.94□□□□□ -0.82
ECHDC1-216ENST00000479525 KRTAP4-16G5E9R7 235 aaPredicted RBP9.93□□□□□ -0.82
ECHDC1-216ENST00000479525 ERC2-IT1O76042 136 aa9.93□□□□□ -0.82
ECHDC1-216ENST00000479525 SPRR1AP35321 89 aa9.93□□□□□ -0.82
ECHDC1-216ENST00000479525 Q8NBF4 154 aa9.93□□□□□ -0.82
ECHDC1-216ENST00000479525 KCNQ1DNQ9H478 68 aa9.93□□□□□ -0.82
ECHDC1-216ENST00000479525 LINC00337Q8N6G1 96 aa9.92□□□□□ -0.82
ECHDC1-216ENST00000479525 GAGE2AQ6NT46 116 aa9.91□□□□□ -0.82
ECHDC1-216ENST00000479525 J3QQQ9 107 aa9.9□□□□□ -0.82
ECHDC1-216ENST00000479525 TPRXLQ17RH7 258 aa9.9□□□□□ -0.82
ECHDC1-216ENST00000479525 ZNF706Q9Y5V0 76 aaPredicted RBP9.9□□□□□ -0.82
ECHDC1-216ENST00000479525 B5MCH6 92 aa9.89□□□□□ -0.83
ECHDC1-216ENST00000479525 EIF4EBP3O60516 100 aaPredicted RBP9.89□□□□□ -0.83
ECHDC1-216ENST00000479525 DDTP30046 118 aa9.89□□□□□ -0.83
ECHDC1-216ENST00000479525 MAP1LC3CQ9BXW4 147 aa9.89□□□□□ -0.83
ECHDC1-216ENST00000479525 FAT4Q6V0I7 4981 aa9.89□□□□□ -0.83
ECHDC1-216ENST00000479525 IGLV9-49A0A0B4J1Y8 123 aa9.88□□□□□ -0.83
ECHDC1-216ENST00000479525 DPM2O94777 84 aa9.88□□□□□ -0.83
ECHDC1-216ENST00000479525 COLCA2A8K830 154 aa9.88□□□□□ -0.83
ECHDC1-216ENST00000479525 IGKCP01834 107 aa9.88□□□□□ -0.83
ECHDC1-216ENST00000479525 LGALS3P17931 250 aaKnown RBP9.88□□□□□ -0.83
ECHDC1-216ENST00000479525 SOSTDC1Q6X4U4 206 aa9.88□□□□□ -0.83
ECHDC1-216ENST00000479525 Q9BRP9 147 aa9.88□□□□□ -0.83
ECHDC1-216ENST00000479525 PLNP26678 52 aa9.87□□□□□ -0.83
ECHDC1-216ENST00000479525 MOBPQ13875 183 aa9.87□□□□□ -0.83
ECHDC1-216ENST00000479525 C4orf48Q5BLP8 95 aa9.87□□□□□ -0.83
ECHDC1-216ENST00000479525 LINC00587B1AMM8 73 aa9.86□□□□□ -0.83
ECHDC1-216ENST00000479525 HERVK_113P61574 105 aa9.86□□□□□ -0.83
ECHDC1-216ENST00000479525 HSPB8Q9UJY1 196 aa9.86□□□□□ -0.83
ECHDC1-216ENST00000479525 A0A0U1RQV1 116 aa9.85□□□□□ -0.83
ECHDC1-216ENST00000479525 ADAMTSL4-AS1Q5T5F5 129 aa9.85□□□□□ -0.83
ECHDC1-216ENST00000479525 SPAG11AQ6PDA7 123 aa9.84□□□□□ -0.83
ECHDC1-216ENST00000479525 MIEN1Q9BRT3 115 aa9.84□□□□□ -0.83
ECHDC1-216ENST00000479525 LINC00483Q53H64 154 aa9.83□□□□□ -0.84
ECHDC1-216ENST00000479525 S100A7L2Q5SY68 101 aa9.83□□□□□ -0.84
ECHDC1-216ENST00000479525 LOC107984156A0A0G2JMH3 177 aa9.82□□□□□ -0.84
ECHDC1-216ENST00000479525 ARL17AQ8IVW1 177 aa9.82□□□□□ -0.84
ECHDC1-216ENST00000479525 SPANXB1Q9NS25 103 aaPredicted RBP9.82□□□□□ -0.84
ECHDC1-216ENST00000479525 A0A0J9YXY3 114 aa9.81□□□□□ -0.84
ECHDC1-216ENST00000479525 S100A12P80511 92 aa9.81□□□□□ -0.84
ECHDC1-216ENST00000479525 TRBV10-2A0A0K0K1G8 114 aa9.8□□□□□ -0.84
ECHDC1-216ENST00000479525 NMUP48645 174 aa9.8□□□□□ -0.84
ECHDC1-216ENST00000479525 LCE2AQ5TA79 106 aaPredicted RBP9.8□□□□□ -0.84
ECHDC1-216ENST00000479525 Q6ZRX8 168 aa9.8□□□□□ -0.84
ECHDC1-216ENST00000479525 ST20-AS1Q8NBB2 130 aa9.8□□□□□ -0.84
ECHDC1-216ENST00000479525 TRAV23DV6A0A075B6W5 121 aa9.79□□□□□ -0.84
ECHDC1-216ENST00000479525 IGLV6-57P01721 117 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms