RNA–Protein interactions for RNA: ENST00000479320.5

HLA-A-206, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,334 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-206ENST00000479320 RPL37AP61513 92 aaKnown RBP11.35□□□□□ -0.59
HLA-A-206ENST00000479320 SRSF9Q13242 221 aaKnown RBP eCLIP11.35□□□□□ -0.59
HLA-A-206ENST00000479320 TMEM141Q96I45 108 aa11.35□□□□□ -0.59
HLA-A-206ENST00000479320 GVQW2A0A096LPI5 108 aaPredicted RBP11.34□□□□□ -0.59
HLA-A-206ENST00000479320 CHTF8P0CG12 524 aa11.34□□□□□ -0.59
HLA-A-206ENST00000479320 SCGB1D4Q6XE38 83 aa11.34□□□□□ -0.59
HLA-A-206ENST00000479320 DPH3Q96FX2 82 aa11.34□□□□□ -0.59
HLA-A-206ENST00000479320 KIR2DL4Q99706 377 aa11.34□□□□□ -0.59
HLA-A-206ENST00000479320 LOC107984156A0A0G2JMH3 177 aa11.33□□□□□ -0.6
HLA-A-206ENST00000479320 RPL13AP40429 203 aaKnown RBP11.33□□□□□ -0.6
HLA-A-206ENST00000479320 GAGE2BQ13066 116 aa11.33□□□□□ -0.6
HLA-A-206ENST00000479320 SS18Q15532 418 aa11.33□□□□□ -0.6
HLA-A-206ENST00000479320 GAGE2EQ4V326 116 aa11.33□□□□□ -0.6
HLA-A-206ENST00000479320 ARL17AQ8IVW1 177 aa11.33□□□□□ -0.6
HLA-A-206ENST00000479320 GAGE2DQ9UEU5 116 aa11.33□□□□□ -0.6
HLA-A-206ENST00000479320 PRO1854Q9UHT4 67 aa11.33□□□□□ -0.6
HLA-A-206ENST00000479320 COX6A2Q02221 97 aa11.32□□□□□ -0.6
HLA-A-206ENST00000479320 UBE2D4Q9Y2X8 147 aa11.32□□□□□ -0.6
HLA-A-206ENST00000479320 CSDC2Q9Y534 153 aaKnown RBP11.32□□□□□ -0.6
HLA-A-206ENST00000479320 LRP1Q07954 4544 aaKnown RBP11.31□□□□□ -0.6
HLA-A-206ENST00000479320 PKHD1L1Q86WI1 4243 aa11.31□□□□□ -0.6
HLA-A-206ENST00000479320 A0A087WYN8 130 aa11.31□□□□□ -0.6
HLA-A-206ENST00000479320 A0A0B4J2C4 111 aa11.31□□□□□ -0.6
HLA-A-206ENST00000479320 C11orf86A6NJI1 115 aa11.31□□□□□ -0.6
HLA-A-206ENST00000479320 SNCGO76070 127 aa11.31□□□□□ -0.6
HLA-A-206ENST00000479320 CD164L2Q6UWJ8 174 aa11.31□□□□□ -0.6
HLA-A-206ENST00000479320 SPACA4Q8TDM5 124 aa11.31□□□□□ -0.6
HLA-A-206ENST00000479320 IGHV1-58A0A0C4DH39 117 aa11.3□□□□□ -0.6
HLA-A-206ENST00000479320 TCL1BO95988 128 aa11.3□□□□□ -0.6
HLA-A-206ENST00000479320 NDUFV3P56181 108 aaKnown RBP11.29□□□□□ -0.6
HLA-A-206ENST00000479320 C2orf66Q6UXQ4 117 aa11.29□□□□□ -0.6
HLA-A-206ENST00000479320 ANKRD29Q8N6D5 301 aa11.29□□□□□ -0.6
HLA-A-206ENST00000479320 LINC00526Q96FQ7 95 aa11.29□□□□□ -0.6
HLA-A-206ENST00000479320 TIMM17AQ99595 171 aa11.29□□□□□ -0.6
HLA-A-206ENST00000479320 SPANXCQ9NY87 97 aa11.29□□□□□ -0.6
HLA-A-206ENST00000479320 FAM240AA0A1B0GVK7 77 aa11.28□□□□□ -0.6
HLA-A-206ENST00000479320 SLC25A20O43772 301 aa11.28□□□□□ -0.6
HLA-A-206ENST00000479320 IFITM1P13164 125 aa11.28□□□□□ -0.6
HLA-A-206ENST00000479320 RNASE13Q5GAN3 156 aaKnown RBP11.28□□□□□ -0.6
HLA-A-206ENST00000479320 FAT3Q8TDW7 4589 aa11.27□□□□□ -0.6
HLA-A-206ENST00000479320 PMVKQ15126 192 aa11.27□□□□□ -0.61
HLA-A-206ENST00000479320 ATXN8Q156A1 80 aa11.27□□□□□ -0.61
HLA-A-206ENST00000479320 TIMM21Q9BVV7 248 aa11.27□□□□□ -0.61
HLA-A-206ENST00000479320 PLAC8Q9NZF1 115 aa11.27□□□□□ -0.61
HLA-A-206ENST00000479320 OXTP01178 125 aa11.26□□□□□ -0.61
HLA-A-206ENST00000479320 IGKV2-24A0A0C4DH68 120 aa11.25□□□□□ -0.61
HLA-A-206ENST00000479320 CFC1BP0CG36 223 aa11.25□□□□□ -0.61
HLA-A-206ENST00000479320 CFC1P0CG37 223 aa11.25□□□□□ -0.61
HLA-A-206ENST00000479320 RPL39P62891 51 aaKnown RBP11.25□□□□□ -0.61
HLA-A-206ENST00000479320 TMEM126AQ9H061 195 aa11.25□□□□□ -0.61
HLA-A-206ENST00000479320 TRAV13-1A0A0B4J241 112 aa11.24□□□□□ -0.61
HLA-A-206ENST00000479320 ZNF561-AS1K7EIQ3 104 aa11.24□□□□□ -0.61
HLA-A-206ENST00000479320 A0A096LNI7 61 aa11.23□□□□□ -0.61
HLA-A-206ENST00000479320 H3BT86 120 aa11.23□□□□□ -0.61
HLA-A-206ENST00000479320 FAM104AQ969W3 186 aa11.23□□□□□ -0.61
HLA-A-206ENST00000479320 PLEKHB2Q96CS7 222 aa11.23□□□□□ -0.61
HLA-A-206ENST00000479320 TRBV30A0A0K0K1B3 111 aa11.22□□□□□ -0.61
HLA-A-206ENST00000479320 TRBV10-2A0A0K0K1G8 114 aa11.22□□□□□ -0.61
HLA-A-206ENST00000479320 COX7A2LO14548 114 aa11.22□□□□□ -0.61
HLA-A-206ENST00000479320 LEPROTO15243 131 aa11.22□□□□□ -0.61
HLA-A-206ENST00000479320 MALP21145 153 aa11.22□□□□□ -0.61
HLA-A-206ENST00000479320 SYCNQ0VAF6 134 aa11.22□□□□□ -0.61
HLA-A-206ENST00000479320 SS18L2Q9UHA2 77 aa11.22□□□□□ -0.61
HLA-A-206ENST00000479320 IGLV4-69A0A075B6H9 119 aa11.21□□□□□ -0.61
HLA-A-206ENST00000479320 IGIPA6NJ69 53 aa11.21□□□□□ -0.61
HLA-A-206ENST00000479320 B5MCH6 92 aa11.2□□□□□ -0.62
HLA-A-206ENST00000479320 LGALS3P17931 250 aaKnown RBP11.2□□□□□ -0.62
HLA-A-206ENST00000479320 C5orf38Q86SI9 138 aa11.2□□□□□ -0.62
HLA-A-206ENST00000479320 OPRPNQ99935 248 aaPredicted RBP11.2□□□□□ -0.62
HLA-A-206ENST00000479320 IMUPQ9GZP8 106 aa11.2□□□□□ -0.62
HLA-A-206ENST00000479320 J3QQQ9 107 aa11.19□□□□□ -0.62
HLA-A-206ENST00000479320 LINC00474Q9P2X8 69 aa11.19□□□□□ -0.62
HLA-A-206ENST00000479320 PKIGQ9Y2B9 76 aa11.19□□□□□ -0.62
HLA-A-206ENST00000479320 C9JAW5 83 aa11.18□□□□□ -0.62
HLA-A-206ENST00000479320 ACYP1P07311 99 aa11.18□□□□□ -0.62
HLA-A-206ENST00000479320 MRPS36P82909 103 aaKnown RBP11.18□□□□□ -0.62
HLA-A-206ENST00000479320 C7orf33Q8WU49 177 aa11.18□□□□□ -0.62
HLA-A-206ENST00000479320 AMELXQ99217 191 aa11.18□□□□□ -0.62
HLA-A-206ENST00000479320 UBR4Q5T4S7 5183 aa11.18□□□□□ -0.62
HLA-A-206ENST00000479320 TRBV7-7A0A0K0K1E9 115 aa11.17□□□□□ -0.62
HLA-A-206ENST00000479320 Q6ZRU5 148 aa11.17□□□□□ -0.62
HLA-A-206ENST00000479320 TMEM170BQ5T4T1 132 aa11.16□□□□□ -0.62
HLA-A-206ENST00000479320 CAMK2N2Q96S95 79 aa11.16□□□□□ -0.62
HLA-A-206ENST00000479320 COX6CP09669 75 aa11.15□□□□□ -0.62
HLA-A-206ENST00000479320 C2orf48Q96LS8 159 aa11.15□□□□□ -0.62
HLA-A-206ENST00000479320 IGHV3OR16-9A0A0B4J2B5 98 aa11.14□□□□□ -0.63
HLA-A-206ENST00000479320 LOC107984640A0A0U1RRK4 108 aa11.14□□□□□ -0.63
HLA-A-206ENST00000479320 TMEM223A0PJW6 202 aa11.13□□□□□ -0.63
HLA-A-206ENST00000479320 A4D1N5 150 aa11.13□□□□□ -0.63
HLA-A-206ENST00000479320 PYGO1Q9Y3Y4 419 aa11.13□□□□□ -0.63
HLA-A-206ENST00000479320 SPAG11BQ08648 103 aa11.12□□□□□ -0.63
HLA-A-206ENST00000479320 IGLV4-3A0A075B6K6 122 aa11.11□□□□□ -0.63
HLA-A-206ENST00000479320 SERTAD4-AS1Q5TG53 156 aa11.11□□□□□ -0.63
HLA-A-206ENST00000479320 PRR3P79522 188 aaKnown RBP11.1□□□□□ -0.63
HLA-A-206ENST00000479320 A0A0J9YXV3 536 aa11.09□□□□□ -0.63
HLA-A-206ENST00000479320 A0A0J9YXY3 114 aa11.09□□□□□ -0.63
HLA-A-206ENST00000479320 TIMM17BO60830 172 aa11.09□□□□□ -0.63
HLA-A-206ENST00000479320 CCDC179H3BU77 68 aa11.09□□□□□ -0.63
HLA-A-206ENST00000479320 MT1HL1P0DM35 61 aa11.09□□□□□ -0.63
HLA-A-206ENST00000479320 TSPEAR-AS2P59090 65 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms