RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 PRLHP81277 87 aa7.51□□□□□ -1.21
ABCF3-212ENST00000478288 SND1-IT1Q9HBX3 110 aa7.51□□□□□ -1.21
ABCF3-212ENST00000478288 ERG28Q9UKR5 140 aa7.51□□□□□ -1.21
ABCF3-212ENST00000478288 SCO1O75880 301 aa7.5□□□□□ -1.21
ABCF3-212ENST00000478288 CHCHD1Q96BP2 118 aaKnown RBP7.5□□□□□ -1.21
ABCF3-212ENST00000478288 RETNLBQ9BQ08 111 aa7.5□□□□□ -1.21
ABCF3-212ENST00000478288 CDIP1Q9H305 208 aa7.5□□□□□ -1.21
ABCF3-212ENST00000478288 TMEM238C9JI98 176 aa7.49□□□□□ -1.21
ABCF3-212ENST00000478288 M0R378 163 aa7.49□□□□□ -1.21
ABCF3-212ENST00000478288 ZNF22P17026 224 aaPredicted RBP7.49□□□□□ -1.21
ABCF3-212ENST00000478288 FAM19A1Q7Z5A9 133 aa7.49□□□□□ -1.21
ABCF3-212ENST00000478288 BAGE3Q86Y29 109 aa7.49□□□□□ -1.21
ABCF3-212ENST00000478288 PLEKHB2Q96CS7 222 aa7.49□□□□□ -1.21
ABCF3-212ENST00000478288 IGLV7-46A0A075B6I9 117 aa7.48□□□□□ -1.21
ABCF3-212ENST00000478288 A0A096LNJ9 63 aa7.48□□□□□ -1.21
ABCF3-212ENST00000478288 HSBP1O75506 76 aa7.48□□□□□ -1.21
ABCF3-212ENST00000478288 PMCHL1Q16048 86 aa7.48□□□□□ -1.21
ABCF3-212ENST00000478288 YPEL4Q96NS1 127 aa7.48□□□□□ -1.21
ABCF3-212ENST00000478288 SPAG11AQ6PDA7 123 aa7.47□□□□□ -1.21
ABCF3-212ENST00000478288 ZNF625Q96I27 306 aaPredicted RBP7.46□□□□□ -1.22
ABCF3-212ENST00000478288 TRGC2P03986 189 aa7.45□□□□□ -1.22
ABCF3-212ENST00000478288 Q8NDZ9 215 aa7.45□□□□□ -1.22
ABCF3-212ENST00000478288 URB1-AS1Q96HZ7 61 aa7.45□□□□□ -1.22
ABCF3-212ENST00000478288 TMEM170BQ5T4T1 132 aa7.44□□□□□ -1.22
ABCF3-212ENST00000478288 FP248Q71RG6 208 aaPredicted RBP7.44□□□□□ -1.22
ABCF3-212ENST00000478288 C11orf86A6NJI1 115 aa7.43□□□□□ -1.22
ABCF3-212ENST00000478288 C3orf22Q8N5N4 141 aa7.43□□□□□ -1.22
ABCF3-212ENST00000478288 IFI27L1Q96BM0 104 aa7.43□□□□□ -1.22
ABCF3-212ENST00000478288 SPRR4Q96PI1 79 aa7.43□□□□□ -1.22
ABCF3-212ENST00000478288 HIGD2AQ9BW72 106 aa7.43□□□□□ -1.22
ABCF3-212ENST00000478288 PPDPFQ9H3Y8 114 aa7.43□□□□□ -1.22
ABCF3-212ENST00000478288 CHTOPQ9Y3Y2 248 aaKnown RBP7.43□□□□□ -1.22
ABCF3-212ENST00000478288 ZNF706Q9Y5V0 76 aaPredicted RBP7.43□□□□□ -1.22
ABCF3-212ENST00000478288 TRAV12-1A0A0B4J245 112 aa7.4□□□□□ -1.22
ABCF3-212ENST00000478288 H0Y8G0 127 aa7.4□□□□□ -1.22
ABCF3-212ENST00000478288 PRYO14603 147 aa7.4□□□□□ -1.22
ABCF3-212ENST00000478288 SERF1AO75920 110 aa7.4□□□□□ -1.22
ABCF3-212ENST00000478288 LEPROTL1O95214 131 aa7.4□□□□□ -1.22
ABCF3-212ENST00000478288 LINC00158P58513 81 aa7.4□□□□□ -1.22
ABCF3-212ENST00000478288 LINC00337Q8N6G1 96 aa7.4□□□□□ -1.22
ABCF3-212ENST00000478288 HSPB8Q9UJY1 196 aa7.4□□□□□ -1.22
ABCF3-212ENST00000478288 COLCA2A8K830 154 aa7.39□□□□□ -1.23
ABCF3-212ENST00000478288 SPRR1AP35321 89 aa7.39□□□□□ -1.23
ABCF3-212ENST00000478288 C4orf48Q5BLP8 95 aa7.39□□□□□ -1.23
ABCF3-212ENST00000478288 FAM19A2Q8N3H0 131 aa7.39□□□□□ -1.23
ABCF3-212ENST00000478288 TMEM223A0PJW6 202 aa7.37□□□□□ -1.23
ABCF3-212ENST00000478288 SPINK1P00995 79 aa7.37□□□□□ -1.23
ABCF3-212ENST00000478288 KCNQ1DNQ9H478 68 aa7.37□□□□□ -1.23
ABCF3-212ENST00000478288 KRTAP4-16G5E9R7 235 aaPredicted RBP7.36□□□□□ -1.23
ABCF3-212ENST00000478288 PLNP26678 52 aa7.36□□□□□ -1.23
ABCF3-212ENST00000478288 KRTAP13-3Q3SY46 172 aa7.36□□□□□ -1.23
ABCF3-212ENST00000478288 LINC00483Q53H64 154 aa7.36□□□□□ -1.23
ABCF3-212ENST00000478288 Q8NBF4 154 aa7.36□□□□□ -1.23
ABCF3-212ENST00000478288 LINC00587B1AMM8 73 aa7.35□□□□□ -1.23
ABCF3-212ENST00000478288 FABP4P15090 132 aa7.35□□□□□ -1.23
ABCF3-212ENST00000478288 HERVK_113P61574 105 aa7.35□□□□□ -1.23
ABCF3-212ENST00000478288 HERV-K104P63124 156 aa7.35□□□□□ -1.23
ABCF3-212ENST00000478288 ASB16-AS1Q495Z4 193 aa7.35□□□□□ -1.23
ABCF3-212ENST00000478288 BOD1L2Q8IYS8 172 aa7.35□□□□□ -1.23
ABCF3-212ENST00000478288 KRTAP9-6A0A140TA67 174 aa7.34□□□□□ -1.23
ABCF3-212ENST00000478288 SMIM13P0DJ93 91 aa7.34□□□□□ -1.23
ABCF3-212ENST00000478288 RPS29P62273 56 aaKnown RBP7.34□□□□□ -1.23
ABCF3-212ENST00000478288 MAP1LC3CQ9BXW4 147 aa7.34□□□□□ -1.23
ABCF3-212ENST00000478288 A0A0U1RRA0 63 aa7.33□□□□□ -1.24
ABCF3-212ENST00000478288 ETDCA0A1B0GVM5 59 aa7.33□□□□□ -1.24
ABCF3-212ENST00000478288 MEIG1Q5JSS6 88 aa7.33□□□□□ -1.24
ABCF3-212ENST00000478288 MIR7-3HGQ8N6C7 128 aa7.33□□□□□ -1.24
ABCF3-212ENST00000478288 DPM2O94777 84 aa7.32□□□□□ -1.24
ABCF3-212ENST00000478288 S100A12P80511 92 aa7.32□□□□□ -1.24
ABCF3-212ENST00000478288 DAND5Q8N907 189 aa7.32□□□□□ -1.24
ABCF3-212ENST00000478288 SMCR5Q8TEV8 140 aa7.32□□□□□ -1.24
ABCF3-212ENST00000478288 TRBV10-3A0A0K0K1G6 114 aa7.31□□□□□ -1.24
ABCF3-212ENST00000478288 NCR3O14931 201 aa7.31□□□□□ -1.24
ABCF3-212ENST00000478288 NDUFA12Q9UI09 145 aa7.31□□□□□ -1.24
ABCF3-212ENST00000478288 LOC107984156A0A0G2JMH3 177 aa7.3□□□□□ -1.24
ABCF3-212ENST00000478288 HIST1H2BKO60814 126 aa7.3□□□□□ -1.24
ABCF3-212ENST00000478288 HIST1H2BJP06899 126 aa7.3□□□□□ -1.24
ABCF3-212ENST00000478288 HIST1H2BOP23527 126 aa7.3□□□□□ -1.24
ABCF3-212ENST00000478288 HIST1H2BBP33778 126 aa7.3□□□□□ -1.24
ABCF3-212ENST00000478288 HIST1H2BDP58876 126 aa7.3□□□□□ -1.24
ABCF3-212ENST00000478288 LINC00310P59036 64 aa7.3□□□□□ -1.24
ABCF3-212ENST00000478288 HIST1H2BCP62807 126 aa7.3□□□□□ -1.24
ABCF3-212ENST00000478288 HIST2H2BEQ16778 126 aa7.3□□□□□ -1.24
ABCF3-212ENST00000478288 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.3□□□□□ -1.24
ABCF3-212ENST00000478288 ARL17AQ8IVW1 177 aa7.3□□□□□ -1.24
ABCF3-212ENST00000478288 HIST1H2BHQ93079 126 aa7.3□□□□□ -1.24
ABCF3-212ENST00000478288 HIST1H2BNQ99877 126 aa7.3□□□□□ -1.24
ABCF3-212ENST00000478288 HIST1H2BMQ99879 126 aa7.3□□□□□ -1.24
ABCF3-212ENST00000478288 TRBV10-2A0A0K0K1G8 114 aa7.29□□□□□ -1.24
ABCF3-212ENST00000478288 MYMXA0A1B0GTQ4 84 aa7.29□□□□□ -1.24
ABCF3-212ENST00000478288 B5MCH6 92 aa7.29□□□□□ -1.24
ABCF3-212ENST00000478288 IGKCP01834 107 aa7.29□□□□□ -1.24
ABCF3-212ENST00000478288 SEC61BP60468 96 aaKnown RBP7.29□□□□□ -1.24
ABCF3-212ENST00000478288 SSBP3-AS1Q7Z2R9 100 aa7.29□□□□□ -1.24
ABCF3-212ENST00000478288 LGALS3P17931 250 aaKnown RBP7.28□□□□□ -1.24
ABCF3-212ENST00000478288 Q8N377 158 aa7.28□□□□□ -1.24
ABCF3-212ENST00000478288 MOBPQ13875 183 aa7.27□□□□□ -1.25
ABCF3-212ENST00000478288 GAGE2AQ6NT46 116 aa7.27□□□□□ -1.25
ABCF3-212ENST00000478288 LEPROTO15243 131 aa7.26□□□□□ -1.25
ABCF3-212ENST00000478288 SLC25A20O43772 301 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms