RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 Q6ZQT0 140 aa10.18□□□□□ -0.78
U2AF1-210ENST00000478282 C20orf197Q8N268 126 aa10.17□□□□□ -0.78
U2AF1-210ENST00000478282 Q8NDZ9 215 aa10.17□□□□□ -0.78
U2AF1-210ENST00000478282 IGHV4-28A0A0C4DH34 117 aa10.17□□□□□ -0.78
U2AF1-210ENST00000478282 CD164L2Q6UWJ8 174 aa10.17□□□□□ -0.78
U2AF1-210ENST00000478282 LINC00612Q8N6U2 182 aa10.17□□□□□ -0.78
U2AF1-210ENST00000478282 KRTAP10-3P60369 221 aa10.17□□□□□ -0.78
U2AF1-210ENST00000478282 RBM3P98179 157 aaKnown RBP10.17□□□□□ -0.78
U2AF1-210ENST00000478282 ZNF561-AS1K7EIQ3 104 aa10.16□□□□□ -0.78
U2AF1-210ENST00000478282 C9orf116Q5BN46 136 aaPredicted RBP10.16□□□□□ -0.78
U2AF1-210ENST00000478282 Q5XG85 94 aa10.16□□□□□ -0.78
U2AF1-210ENST00000478282 LOC110117498A0A087WWA1 95 aa10.16□□□□□ -0.78
U2AF1-210ENST00000478282 LINC00269Q8N2A0 174 aa10.15□□□□□ -0.78
U2AF1-210ENST00000478282 C4orf26Q17RF5 130 aa10.15□□□□□ -0.79
U2AF1-210ENST00000478282 A0A096LPF7 62 aa10.14□□□□□ -0.79
U2AF1-210ENST00000478282 WIPF1O43516 503 aa10.14□□□□□ -0.79
U2AF1-210ENST00000478282 BCE1O60756 84 aa10.14□□□□□ -0.79
U2AF1-210ENST00000478282 C6orf223Q8N319 242 aa10.14□□□□□ -0.79
U2AF1-210ENST00000478282 CHCHD10Q8WYQ3 142 aaPredicted RBP10.14□□□□□ -0.79
U2AF1-210ENST00000478282 LAMTOR3Q9UHA4 124 aa10.13□□□□□ -0.79
U2AF1-210ENST00000478282 PRO0255Q9UI72 69 aa10.13□□□□□ -0.79
U2AF1-210ENST00000478282 TRAV7A0A075B6U4 112 aa10.13□□□□□ -0.79
U2AF1-210ENST00000478282 FAM236DA0A1B0GTK5 79 aa10.13□□□□□ -0.79
U2AF1-210ENST00000478282 FAM236CP0DP71 79 aa10.13□□□□□ -0.79
U2AF1-210ENST00000478282 IGLV10-54A0A075B6I4 117 aa10.12□□□□□ -0.79
U2AF1-210ENST00000478282 LINC01547P58512 204 aaPredicted RBP10.12□□□□□ -0.79
U2AF1-210ENST00000478282 M0R2N4 97 aa10.12□□□□□ -0.79
U2AF1-210ENST00000478282 LINC00482Q8N8I6 264 aa10.11□□□□□ -0.79
U2AF1-210ENST00000478282 HRCT1Q6UXD1 115 aa10.1□□□□□ -0.79
U2AF1-210ENST00000478282 Q6ZVQ6 151 aa10.1□□□□□ -0.79
U2AF1-210ENST00000478282 KRTAP24-1Q3LI83 254 aa10.1□□□□□ -0.79
U2AF1-210ENST00000478282 FBN1P35555 2871 aaKnown RBP10.1□□□□□ -0.79
U2AF1-210ENST00000478282 H7BZZ5 65 aa10.1□□□□□ -0.79
U2AF1-210ENST00000478282 REG3AQ06141 175 aa10.1□□□□□ -0.79
U2AF1-210ENST00000478282 ANGP03950 147 aaKnown RBP10.09□□□□□ -0.79
U2AF1-210ENST00000478282 HAMPP81172 84 aa10.09□□□□□ -0.79
U2AF1-210ENST00000478282 Q8N3U1 123 aa10.09□□□□□ -0.79
U2AF1-210ENST00000478282 IGLV6-57P01721 117 aa10.08□□□□□ -0.8
U2AF1-210ENST00000478282 C9orf66Q5T8R8 295 aa10.08□□□□□ -0.8
U2AF1-210ENST00000478282 MUC7Q8TAX7 377 aa10.08□□□□□ -0.8
U2AF1-210ENST00000478282 C10orf25Q5T742 122 aa10.07□□□□□ -0.8
U2AF1-210ENST00000478282 Q6ZQY7 126 aa10.07□□□□□ -0.8
U2AF1-210ENST00000478282 X6R8D5 127 aa10.07□□□□□ -0.8
U2AF1-210ENST00000478282 ANK2Q01484 3957 aa10.07□□□□□ -0.8
U2AF1-210ENST00000478282 EPM2AB3EWF7 344 aa10.07□□□□□ -0.8
U2AF1-210ENST00000478282 PDE6GP18545 87 aa10.07□□□□□ -0.8
U2AF1-210ENST00000478282 KLKP1Q107X0 134 aa10.07□□□□□ -0.8
U2AF1-210ENST00000478282 TEP1Q99973 2627 aaKnown RBP10.07□□□□□ -0.8
U2AF1-210ENST00000478282 SETD2Q9BYW2 2564 aaPredicted RBP10.07□□□□□ -0.8
U2AF1-210ENST00000478282 UNQ6190/PRO20217Q6UXQ8 127 aa10.07□□□□□ -0.8
U2AF1-210ENST00000478282 TRAV10A0A0B4J240 114 aa10.06□□□□□ -0.8
U2AF1-210ENST00000478282 H3BQ85 93 aa10.06□□□□□ -0.8
U2AF1-210ENST00000478282 CXCL6P80162 114 aa10.06□□□□□ -0.8
U2AF1-210ENST00000478282 SERP1Q9Y6X1 66 aa10.06□□□□□ -0.8
U2AF1-210ENST00000478282 TENM1Q9UKZ4 2725 aa10.06□□□□□ -0.8
U2AF1-210ENST00000478282 SPAG11BQ08648 103 aa10.06□□□□□ -0.8
U2AF1-210ENST00000478282 SPATA3Q8NHX4 192 aa10.06□□□□□ -0.8
U2AF1-210ENST00000478282 A0A0J9YWU9 116 aa10.04□□□□□ -0.8
U2AF1-210ENST00000478282 IGHV4-30-4P0DP06 118 aa10.04□□□□□ -0.8
U2AF1-210ENST00000478282 CMYA5Q8N3K9 4069 aa10.04□□□□□ -0.8
U2AF1-210ENST00000478282 LYRM9A8MSI8 78 aa10.02□□□□□ -0.81
U2AF1-210ENST00000478282 SNURFQ9Y675 71 aa10.02□□□□□ -0.81
U2AF1-210ENST00000478282 DIRC1Q969H9 104 aa10.01□□□□□ -0.81
U2AF1-210ENST00000478282 RMI2Q96E14 147 aa10.01□□□□□ -0.81
U2AF1-210ENST00000478282 TRBV7-4A0A0J9YYF1 115 aa10□□□□□ -0.81
U2AF1-210ENST00000478282 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.99□□□□□ -0.81
U2AF1-210ENST00000478282 F8WEM9 126 aa9.99□□□□□ -0.81
U2AF1-210ENST00000478282 GVQW2A0A096LPI5 108 aaPredicted RBP9.98□□□□□ -0.81
U2AF1-210ENST00000478282 SCXQ7RTU7 201 aa9.97□□□□□ -0.81
U2AF1-210ENST00000478282 COX7BP24311 80 aa9.97□□□□□ -0.81
U2AF1-210ENST00000478282 TM2D3Q9BRN9 247 aa9.97□□□□□ -0.81
U2AF1-210ENST00000478282 DEFB4AO15263 64 aa9.96□□□□□ -0.81
U2AF1-210ENST00000478282 ZNF73O43830 326 aaPredicted RBP9.96□□□□□ -0.81
U2AF1-210ENST00000478282 ELOF1P60002 83 aaKnown RBP9.95□□□□□ -0.82
U2AF1-210ENST00000478282 XAGE1AQ9HD64 81 aa9.95□□□□□ -0.82
U2AF1-210ENST00000478282 C6orf48Q9UBA6 75 aa9.95□□□□□ -0.82
U2AF1-210ENST00000478282 TRBV7-6A0A0J9YX20 115 aa9.95□□□□□ -0.82
U2AF1-210ENST00000478282 NDUFC1O43677 76 aa9.95□□□□□ -0.82
U2AF1-210ENST00000478282 DAD1P61803 113 aa9.94□□□□□ -0.82
U2AF1-210ENST00000478282 PRR34Q9NV39 138 aa9.94□□□□□ -0.82
U2AF1-210ENST00000478282 NBEAL2Q6ZNJ1 2754 aa9.94□□□□□ -0.82
U2AF1-210ENST00000478282 VWFP04275 2813 aa9.94□□□□□ -0.82
U2AF1-210ENST00000478282 LELP1Q5T871 98 aa9.94□□□□□ -0.82
U2AF1-210ENST00000478282 KLK12Q9UKR0 248 aa9.94□□□□□ -0.82
U2AF1-210ENST00000478282 DNAH3Q8TD57 4116 aa9.93□□□□□ -0.82
U2AF1-210ENST00000478282 MRAPQ8TCY5 172 aa9.93□□□□□ -0.82
U2AF1-210ENST00000478282 ATRQ13535 2644 aa9.93□□□□□ -0.82
U2AF1-210ENST00000478282 TRRAPQ9Y4A5 3859 aa9.93□□□□□ -0.82
U2AF1-210ENST00000478282 SMIM26A0A096LP01 95 aa9.92□□□□□ -0.82
U2AF1-210ENST00000478282 DEFB135Q30KP9 77 aa9.92□□□□□ -0.82
U2AF1-210ENST00000478282 NREPQ16612 68 aa9.92□□□□□ -0.82
U2AF1-210ENST00000478282 MIFP14174 115 aa9.91□□□□□ -0.82
U2AF1-210ENST00000478282 ATP5EP56381 51 aaPredicted RBP9.9□□□□□ -0.82
U2AF1-210ENST00000478282 FP248Q71RG6 208 aaPredicted RBP9.9□□□□□ -0.82
U2AF1-210ENST00000478282 BPY2O14599 106 aa9.9□□□□□ -0.83
U2AF1-210ENST00000478282 CELA1Q9UNI1 258 aa9.9□□□□□ -0.83
U2AF1-210ENST00000478282 VPREB1P12018 145 aa9.89□□□□□ -0.83
U2AF1-210ENST00000478282 LINC00336Q6ZUF6 198 aa9.89□□□□□ -0.83
U2AF1-210ENST00000478282 TMEM254Q8TBM7 123 aa9.88□□□□□ -0.83
U2AF1-210ENST00000478282 ERC2-IT1O76042 136 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms