RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 LINC00518Q8N0U6 118 aa10.24□□□□□ -0.77
VHL-203ENST00000477538 PRO1933Q9H354 126 aa10.24□□□□□ -0.77
VHL-203ENST00000477538 HIGD1BQ9P298 99 aa10.24□□□□□ -0.77
VHL-203ENST00000477538 UQCR10Q9UDW1 63 aa10.24□□□□□ -0.77
VHL-203ENST00000477538 DYNC1H1Q14204 4646 aaKnown RBP10.24□□□□□ -0.77
VHL-203ENST00000477538 LOC107984156A0A0G2JMH3 177 aa10.23□□□□□ -0.77
VHL-203ENST00000477538 HAMPP81172 84 aa10.23□□□□□ -0.77
VHL-203ENST00000477538 SRSF9Q13242 221 aaKnown RBP eCLIP10.23□□□□□ -0.77
VHL-203ENST00000477538 SOSTDC1Q6X4U4 206 aa10.23□□□□□ -0.77
VHL-203ENST00000477538 C2orf91Q6ZV80 131 aa10.23□□□□□ -0.77
VHL-203ENST00000477538 Q6ZVH6 145 aa10.23□□□□□ -0.77
VHL-203ENST00000477538 ARL17AQ8IVW1 177 aa10.23□□□□□ -0.77
VHL-203ENST00000477538 CIRBP-AS1Q8TBR5 109 aa10.23□□□□□ -0.77
VHL-203ENST00000477538 LINC00308Q8TCZ7 52 aa10.23□□□□□ -0.77
VHL-203ENST00000477538 PLAC8Q9NZF1 115 aa10.23□□□□□ -0.77
VHL-203ENST00000477538 PLA2G2DQ9UNK4 145 aa10.23□□□□□ -0.77
VHL-203ENST00000477538 EPPK1P58107 5090 aaKnown RBP10.23□□□□□ -0.77
VHL-203ENST00000477538 EIF4EBP3O60516 100 aaPredicted RBP10.22□□□□□ -0.77
VHL-203ENST00000477538 SERTAD4-AS1Q5TG53 156 aa10.22□□□□□ -0.77
VHL-203ENST00000477538 LRP1BQ9NZR2 4599 aa10.21□□□□□ -0.77
VHL-203ENST00000477538 DNAH8Q96JB1 4490 aa10.21□□□□□ -0.77
VHL-203ENST00000477538 IFITM1P13164 125 aa10.21□□□□□ -0.77
VHL-203ENST00000477538 RPL24P83731 157 aaKnown RBP10.21□□□□□ -0.77
VHL-203ENST00000477538 KRTAP7-1Q8IUC3 87 aa10.21□□□□□ -0.77
VHL-203ENST00000477538 COPS9Q8WXC6 57 aa10.21□□□□□ -0.77
VHL-203ENST00000477538 VPREB1P12018 145 aa10.2□□□□□ -0.78
VHL-203ENST00000477538 XGP55808 180 aa10.2□□□□□ -0.78
VHL-203ENST00000477538 Q8NDZ9 215 aa10.2□□□□□ -0.78
VHL-203ENST00000477538 HIST1H4GQ99525 98 aa10.2□□□□□ -0.78
VHL-203ENST00000477538 EPM2AB3EWF7 344 aa10.19□□□□□ -0.78
VHL-203ENST00000477538 M0QXV9 152 aa10.19□□□□□ -0.78
VHL-203ENST00000477538 MUSTN1Q8IVN3 82 aa10.19□□□□□ -0.78
VHL-203ENST00000477538 NKAPP1Q8N9T2 125 aa10.19□□□□□ -0.78
VHL-203ENST00000477538 IGLV5-37A0A075B6J1 123 aa10.18□□□□□ -0.78
VHL-203ENST00000477538 CDK2AP2O75956 126 aa10.18□□□□□ -0.78
VHL-203ENST00000477538 PPDPFQ9H3Y8 114 aa10.18□□□□□ -0.78
VHL-203ENST00000477538 TSTD3H0UI37 97 aa10.17□□□□□ -0.78
VHL-203ENST00000477538 NDUFC2O95298 119 aa10.17□□□□□ -0.78
VHL-203ENST00000477538 HNRNPA3P51991 378 aaKnown RBP10.17□□□□□ -0.78
VHL-203ENST00000477538 C22orf24Q9Y442 160 aa10.17□□□□□ -0.78
VHL-203ENST00000477538 NCR3O14931 201 aa10.16□□□□□ -0.78
VHL-203ENST00000477538 PHF5AQ7RTV0 110 aaKnown RBP10.16□□□□□ -0.78
VHL-203ENST00000477538 PRR3P79522 188 aaKnown RBP10.15□□□□□ -0.78
VHL-203ENST00000477538 TAL2Q16559 108 aa10.15□□□□□ -0.78
VHL-203ENST00000477538 MRPL55Q7Z7F7 128 aaKnown RBP10.15□□□□□ -0.78
VHL-203ENST00000477538 GAGE10A6NGK3 116 aa10.13□□□□□ -0.79
VHL-203ENST00000477538 M0R378 163 aa10.13□□□□□ -0.79
VHL-203ENST00000477538 LBHQ53QV2 105 aaPredicted RBP10.13□□□□□ -0.79
VHL-203ENST00000477538 C7orf33Q8WU49 177 aa10.13□□□□□ -0.79
VHL-203ENST00000477538 TRBV10-2A0A0K0K1G8 114 aa10.12□□□□□ -0.79
VHL-203ENST00000477538 HSD52Q0P140 79 aa10.12□□□□□ -0.79
VHL-203ENST00000477538 CEND1Q8N111 149 aa10.12□□□□□ -0.79
VHL-203ENST00000477538 LINC00167Q96N53 147 aa10.12□□□□□ -0.79
VHL-203ENST00000477538 A4D1N5 150 aa10.11□□□□□ -0.79
VHL-203ENST00000477538 UBE2BP63146 152 aa10.11□□□□□ -0.79
VHL-203ENST00000477538 APOBP04114 4563 aaKnown RBP10.11□□□□□ -0.79
VHL-203ENST00000477538 IGKV2-28A0A075B6P5 120 aa10.1□□□□□ -0.79
VHL-203ENST00000477538 IGKV2D-28P01615 120 aa10.1□□□□□ -0.79
VHL-203ENST00000477538 SMR3BP02814 79 aaPredicted RBP10.1□□□□□ -0.79
VHL-203ENST00000477538 RPL37AP8A6NKH3 93 aa10.09□□□□□ -0.79
VHL-203ENST00000477538 S100A7L2Q5SY68 101 aa10.08□□□□□ -0.8
VHL-203ENST00000477538 FXYD2P54710 66 aa10.07□□□□□ -0.8
VHL-203ENST00000477538 KRTAP11-1Q8IUC1 163 aa10.07□□□□□ -0.8
VHL-203ENST00000477538 LINC00528Q8N1L1 170 aa10.07□□□□□ -0.8
VHL-203ENST00000477538 LINC00337Q8N6G1 96 aa10.07□□□□□ -0.8
VHL-203ENST00000477538 IGLV1-50A0A075B6I6 118 aa10.06□□□□□ -0.8
VHL-203ENST00000477538 TRBV10-3A0A0K0K1G6 114 aa10.06□□□□□ -0.8
VHL-203ENST00000477538 TMEM238LA0A1B0GVL6 79 aa10.06□□□□□ -0.8
VHL-203ENST00000477538 A6NJY4 79 aa10.06□□□□□ -0.8
VHL-203ENST00000477538 DDTP30046 118 aa10.06□□□□□ -0.8
VHL-203ENST00000477538 CTAG1AP78358 180 aa10.06□□□□□ -0.8
VHL-203ENST00000477538 OR13C6PQ8NH95 151 aa10.06□□□□□ -0.8
VHL-203ENST00000477538 TRAV13-2A0A0B4J235 113 aa10.04□□□□□ -0.8
VHL-203ENST00000477538 IGLV6-57P01721 117 aa10.04□□□□□ -0.8
VHL-203ENST00000477538 TMEM126AQ9H061 195 aa10.04□□□□□ -0.8
VHL-203ENST00000477538 KIAA1109Q2LD37 5005 aa10.04□□□□□ -0.8
VHL-203ENST00000477538 A6NDN8 102 aa10.03□□□□□ -0.8
VHL-203ENST00000477538 PSORS1C2Q9UIG4 136 aa10.03□□□□□ -0.8
VHL-203ENST00000477538 BIRC6Q9NR09 4857 aa10.02□□□□□ -0.8
VHL-203ENST00000477538 M0R143 59 aa10.02□□□□□ -0.81
VHL-203ENST00000477538 PRYO14603 147 aa10.02□□□□□ -0.81
VHL-203ENST00000477538 CFC1BP0CG36 223 aa10.02□□□□□ -0.81
VHL-203ENST00000477538 CFC1P0CG37 223 aa10.02□□□□□ -0.81
VHL-203ENST00000477538 RYR1P21817 5038 aa10.02□□□□□ -0.81
VHL-203ENST00000477538 A0A0B4J2C4 111 aa10.01□□□□□ -0.81
VHL-203ENST00000477538 HINT1P49773 126 aaPredicted RBP10.01□□□□□ -0.81
VHL-203ENST00000477538 RPL37AP61513 92 aaKnown RBP10.01□□□□□ -0.81
VHL-203ENST00000477538 BVES-AS1Q5T3Y7 98 aa10.01□□□□□ -0.81
VHL-203ENST00000477538 RAB37Q96AX2 223 aa10.01□□□□□ -0.81
VHL-203ENST00000477538 KCNQ1DNQ9H478 68 aa10.01□□□□□ -0.81
VHL-203ENST00000477538 FAM229AH3BQW9 127 aa10□□□□□ -0.81
VHL-203ENST00000477538 REG3GQ6UW15 175 aa10□□□□□ -0.81
VHL-203ENST00000477538 NHP2Q9NX24 153 aaKnown RBP10□□□□□ -0.81
VHL-203ENST00000477538 CBY1Q9Y3M2 126 aa10□□□□□ -0.81
VHL-203ENST00000477538 TRAV23DV6A0A075B6W5 121 aa9.99□□□□□ -0.81
VHL-203ENST00000477538 RPL13AP40429 203 aaKnown RBP9.99□□□□□ -0.81
VHL-203ENST00000477538 C1orf137Q5JT78 98 aa9.99□□□□□ -0.81
VHL-203ENST00000477538 Q8N1X5 172 aa9.98□□□□□ -0.81
VHL-203ENST00000477538 HSPG2P98160 4391 aa9.98□□□□□ -0.81
VHL-203ENST00000477538 PLA2G1BP04054 148 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms