RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 SIPA1L3O60292 1781 aaPredicted RBP0.59□□□□□ -2.32
TARDBP-208ENST00000477447 KIAA0556O60303 1618 aa0.59□□□□□ -2.32
TARDBP-208ENST00000477447 ADCY10Q96PN6 1610 aa0.59□□□□□ -2.32
TARDBP-208ENST00000477447 SNRNP200O75643 2136 aaKnown RBP0.59□□□□□ -2.32
TARDBP-208ENST00000477447 AFDNP55196 1824 aaKnown RBP0.59□□□□□ -2.32
TARDBP-208ENST00000477447 CROCC2H7BZ55 1655 aa0.59□□□□□ -2.32
TARDBP-208ENST00000477447 CFAP43Q8NDM7 1665 aa0.59□□□□□ -2.32
TARDBP-208ENST00000477447 CITO14578 2027 aa0.59□□□□□ -2.32
TARDBP-208ENST00000477447 NCR3O14931 201 aa0.58□□□□□ -2.32
TARDBP-208ENST00000477447 COX6B1P14854 86 aa0.58□□□□□ -2.32
TARDBP-208ENST00000477447 DEFB114Q30KQ6 69 aa0.58□□□□□ -2.32
TARDBP-208ENST00000477447 SSBP3-AS1Q7Z2R9 100 aa0.58□□□□□ -2.32
TARDBP-208ENST00000477447 UBL5Q9BZL1 73 aa0.58□□□□□ -2.32
TARDBP-208ENST00000477447 KCNQ1DNQ9H478 68 aa0.58□□□□□ -2.32
TARDBP-208ENST00000477447 BTAF1O14981 1849 aa0.58□□□□□ -2.32
TARDBP-208ENST00000477447 PLXNA1Q9UIW2 1896 aa0.58□□□□□ -2.32
TARDBP-208ENST00000477447 MYH8P13535 1937 aa0.58□□□□□ -2.32
TARDBP-208ENST00000477447 LOC285556D6RIA3 1793 aa0.57□□□□□ -2.32
TARDBP-208ENST00000477447 DOCK2Q92608 1830 aa0.57□□□□□ -2.32
TARDBP-208ENST00000477447 ABCA4P78363 2273 aa0.57□□□□□ -2.32
TARDBP-208ENST00000477447 TANC1Q9C0D5 1861 aa0.57□□□□□ -2.32
TARDBP-208ENST00000477447 PREX1Q8TCU6 1659 aa0.57□□□□□ -2.32
TARDBP-208ENST00000477447 SMIM27A0A1W2PRY6 76 aa0.57□□□□□ -2.32
TARDBP-208ENST00000477447 CPSF4LA6NMK7 179 aaKnown RBP0.57□□□□□ -2.32
TARDBP-208ENST00000477447 PIN1P1O15428 100 aa0.57□□□□□ -2.32
TARDBP-208ENST00000477447 FCER1GP30273 86 aa0.57□□□□□ -2.32
TARDBP-208ENST00000477447 SPINK13Q1W4C9 94 aa0.57□□□□□ -2.32
TARDBP-208ENST00000477447 ABRACLQ9P1F3 81 aa0.57□□□□□ -2.32
TARDBP-208ENST00000477447 PTPRDP23468 1912 aa0.57□□□□□ -2.32
TARDBP-208ENST00000477447 DOT1LQ8TEK3 1739 aa0.57□□□□□ -2.32
TARDBP-208ENST00000477447 FMN2Q9NZ56 1722 aa0.57□□□□□ -2.32
TARDBP-208ENST00000477447 PARP4Q9UKK3 1724 aaKnown RBP0.57□□□□□ -2.32
TARDBP-208ENST00000477447 NFAT5O94916 1531 aa0.57□□□□□ -2.32
TARDBP-208ENST00000477447 KIAA0100Q14667 2235 aaKnown RBP0.57□□□□□ -2.32
TARDBP-208ENST00000477447 SIP14410 1827 aa0.57□□□□□ -2.32
TARDBP-208ENST00000477447 C5P01031 1676 aa0.56□□□□□ -2.32
TARDBP-208ENST00000477447 PLCH1Q4KWH8 1693 aa0.56□□□□□ -2.32
TARDBP-208ENST00000477447 LRRC37A2A6NM11 1700 aa0.56□□□□□ -2.32
TARDBP-208ENST00000477447 RICTORQ6R327 1708 aa0.56□□□□□ -2.32
TARDBP-208ENST00000477447 SPAG17Q6Q759 2223 aa0.56□□□□□ -2.32
TARDBP-208ENST00000477447 UNC13CQ8NB66 2214 aa0.56□□□□□ -2.32
TARDBP-208ENST00000477447 A0A1B0GUL6 1792 aa0.56□□□□□ -2.32
TARDBP-208ENST00000477447 LINC01546A6NGU7 62 aa0.56□□□□□ -2.32
TARDBP-208ENST00000477447 I3L3M4 83 aa0.56□□□□□ -2.32
TARDBP-208ENST00000477447 K7EIL1 84 aa0.56□□□□□ -2.32
TARDBP-208ENST00000477447 M0R1W7 72 aa0.56□□□□□ -2.32
TARDBP-208ENST00000477447 PRH1P02810 166 aa0.56□□□□□ -2.32
TARDBP-208ENST00000477447 PLNP26678 52 aa0.56□□□□□ -2.32
TARDBP-208ENST00000477447 HAMPP81172 84 aa0.56□□□□□ -2.32
TARDBP-208ENST00000477447 ZNF236Q9UL36 1845 aa0.56□□□□□ -2.32
TARDBP-208ENST00000477447 ABCC8Q09428 1581 aa0.56□□□□□ -2.32
TARDBP-208ENST00000477447 TET1Q8NFU7 2136 aa0.56□□□□□ -2.32
TARDBP-208ENST00000477447 TRPM7Q96QT4 1865 aa0.56□□□□□ -2.32
TARDBP-208ENST00000477447 NOTCH1P46531 2555 aa0.55□□□□□ -2.32
TARDBP-208ENST00000477447 POLR1AO95602 1720 aaPredicted RBP0.55□□□□□ -2.32
TARDBP-208ENST00000477447 NUP188Q5SRE5 1749 aa0.55□□□□□ -2.32
TARDBP-208ENST00000477447 MAP2P11137 1827 aaKnown RBP0.55□□□□□ -2.32
TARDBP-208ENST00000477447 TRPM2O94759 1503 aa0.55□□□□□ -2.32
TARDBP-208ENST00000477447 IQGAP2Q13576 1575 aa0.55□□□□□ -2.32
TARDBP-208ENST00000477447 ETDCA0A1B0GVM5 59 aa0.55□□□□□ -2.32
TARDBP-208ENST00000477447 I3L2K1 104 aa0.55□□□□□ -2.32
TARDBP-208ENST00000477447 DEFB123Q8N688 67 aa0.55□□□□□ -2.32
TARDBP-208ENST00000477447 TCHHQ07283 1943 aa0.55□□□□□ -2.32
TARDBP-208ENST00000477447 E9PCH4 1651 aa0.55□□□□□ -2.32
TARDBP-208ENST00000477447 SCN3AQ9NY46 2000 aa0.55□□□□□ -2.32
TARDBP-208ENST00000477447 PI4KAP42356 2102 aa0.55□□□□□ -2.32
TARDBP-208ENST00000477447 TNRC6BQ9UPQ9 1833 aaKnown RBP0.54□□□□□ -2.32
TARDBP-208ENST00000477447 ARFGEF1Q9Y6D6 1849 aa0.54□□□□□ -2.32
TARDBP-208ENST00000477447 CASP8AP2Q9UKL3 1982 aa0.54□□□□□ -2.32
TARDBP-208ENST00000477447 NRXN3Q9Y4C0 1643 aa0.54□□□□□ -2.32
TARDBP-208ENST00000477447 FBN2P35556 2912 aa0.54□□□□□ -2.32
TARDBP-208ENST00000477447 C3P01024 1663 aa0.54□□□□□ -2.32
TARDBP-208ENST00000477447 DEFB131BA0A096LNP1 70 aa0.54□□□□□ -2.32
TARDBP-208ENST00000477447 CRIP1P50238 77 aa0.54□□□□□ -2.32
TARDBP-208ENST00000477447 C10orf95Q9H7T3 257 aa0.54□□□□□ -2.32
TARDBP-208ENST00000477447 LY75O60449 1722 aa0.54□□□□□ -2.32
TARDBP-208ENST00000477447 TJP1Q07157 1748 aa0.54□□□□□ -2.32
TARDBP-208ENST00000477447 MED12Q93074 2177 aa0.54□□□□□ -2.32
TARDBP-208ENST00000477447 MYH4Q9Y623 1939 aa0.54□□□□□ -2.32
TARDBP-208ENST00000477447 ATP7AQ04656 1500 aa0.54□□□□□ -2.32
TARDBP-208ENST00000477447 A0A0G2JMZ2 1700 aa0.53□□□□□ -2.32
TARDBP-208ENST00000477447 PKD1L3Q7Z443 1732 aa0.53□□□□□ -2.32
TARDBP-208ENST00000477447 TIAM2Q8IVF5 1701 aa0.53□□□□□ -2.32
TARDBP-208ENST00000477447 PAPPA2Q9BXP8 1791 aa0.53□□□□□ -2.32
TARDBP-208ENST00000477447 SPTY2D1-AS1A0A0U1RR47 76 aa0.53□□□□□ -2.32
TARDBP-208ENST00000477447 K7EQZ3 153 aa0.53□□□□□ -2.32
TARDBP-208ENST00000477447 RPL38P63173 70 aaKnown RBP0.53□□□□□ -2.32
TARDBP-208ENST00000477447 SERF2P84101 59 aa0.53□□□□□ -2.32
TARDBP-208ENST00000477447 UBE2DNLQ8IWF7 75 aa0.53□□□□□ -2.32
TARDBP-208ENST00000477447 CRIPTQ9P021 101 aa0.53□□□□□ -2.32
TARDBP-208ENST00000477447 PIEZO2Q9H5I5 2752 aa0.53□□□□□ -2.32
TARDBP-208ENST00000477447 DEPDC5O75140 1603 aa0.53□□□□□ -2.33
TARDBP-208ENST00000477447 JMJD1CQ15652 2540 aa0.53□□□□□ -2.33
TARDBP-208ENST00000477447 NRAPQ86VF7 1730 aa0.52□□□□□ -2.33
TARDBP-208ENST00000477447 TP53AIP1Q9HCN2 124 aa0.52□□□□□ -2.33
TARDBP-208ENST00000477447 FAM208AQ9UK61 1670 aaKnown RBP0.52□□□□□ -2.33
TARDBP-208ENST00000477447 LRRC37AA6NMS7 1700 aa0.52□□□□□ -2.33
TARDBP-208ENST00000477447 LAMA4Q16363 1823 aa0.52□□□□□ -2.33
TARDBP-208ENST00000477447 ZGRF1Q86YA3 2104 aa0.52□□□□□ -2.33
TARDBP-208ENST00000477447 LOC730098B7Z3J9 87 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms