RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 C16orf74Q96GX8 76 aa3.51□□□□□ -1.85
CCDC39-204ENST00000476379 LYRM9A8MSI8 78 aa3.51□□□□□ -1.85
CCDC39-204ENST00000476379 RPL32P62910 135 aaKnown RBP3.51□□□□□ -1.85
CCDC39-204ENST00000476379 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.51□□□□□ -1.85
CCDC39-204ENST00000476379 H3BT86 120 aa3.51□□□□□ -1.85
CCDC39-204ENST00000476379 C11orf72Q8NBR9 251 aa3.51□□□□□ -1.85
CCDC39-204ENST00000476379 UBL5Q9BZL1 73 aa3.51□□□□□ -1.85
CCDC39-204ENST00000476379 SPANXCQ9NY87 97 aa3.51□□□□□ -1.85
CCDC39-204ENST00000476379 LINC00959A0A1B0GUT2 108 aa3.5□□□□□ -1.85
CCDC39-204ENST00000476379 USP17L23D6RBM5 183 aa3.5□□□□□ -1.85
CCDC39-204ENST00000476379 J3QLI3 93 aa3.5□□□□□ -1.85
CCDC39-204ENST00000476379 DEFB116Q30KQ4 102 aa3.5□□□□□ -1.85
CCDC39-204ENST00000476379 PPDPFQ9H3Y8 114 aa3.5□□□□□ -1.85
CCDC39-204ENST00000476379 COL7A1Q02388 2944 aa3.5□□□□□ -1.85
CCDC39-204ENST00000476379 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.5□□□□□ -1.85
CCDC39-204ENST00000476379 LINC00846Q9NV44 126 aa3.5□□□□□ -1.85
CCDC39-204ENST00000476379 SMIM9A6NGZ8 99 aa3.5□□□□□ -1.85
CCDC39-204ENST00000476379 A0A0J9YWU9 116 aa3.5□□□□□ -1.85
CCDC39-204ENST00000476379 MPLKIPQ8TAP9 179 aa3.5□□□□□ -1.85
CCDC39-204ENST00000476379 CELA1Q9UNI1 258 aa3.5□□□□□ -1.85
CCDC39-204ENST00000476379 ANK2Q01484 3957 aa3.49□□□□□ -1.85
CCDC39-204ENST00000476379 C10orf25Q5T742 122 aa3.49□□□□□ -1.85
CCDC39-204ENST00000476379 C3orf22Q8N5N4 141 aa3.49□□□□□ -1.85
CCDC39-204ENST00000476379 SMCR5Q8TEV8 140 aa3.49□□□□□ -1.85
CCDC39-204ENST00000476379 FAM19A4Q96LR4 140 aa3.49□□□□□ -1.85
CCDC39-204ENST00000476379 PRO0255Q9UI72 69 aa3.49□□□□□ -1.85
CCDC39-204ENST00000476379 LITAFQ99732 161 aa3.49□□□□□ -1.85
CCDC39-204ENST00000476379 FAM236DA0A1B0GTK5 79 aa3.49□□□□□ -1.85
CCDC39-204ENST00000476379 FAM236CP0DP71 79 aa3.49□□□□□ -1.85
CCDC39-204ENST00000476379 KIR2DL5BQ8NHK3 375 aa3.49□□□□□ -1.85
CCDC39-204ENST00000476379 PSCAO43653 123 aa3.48□□□□□ -1.85
CCDC39-204ENST00000476379 NANOS2P60321 138 aaKnown RBP3.48□□□□□ -1.85
CCDC39-204ENST00000476379 NKAPP1Q8N9T2 125 aa3.48□□□□□ -1.85
CCDC39-204ENST00000476379 PYGO1Q9Y3Y4 419 aa3.48□□□□□ -1.85
CCDC39-204ENST00000476379 UBE2BP63146 152 aa3.48□□□□□ -1.85
CCDC39-204ENST00000476379 HRCT1Q6UXD1 115 aa3.48□□□□□ -1.85
CCDC39-204ENST00000476379 FHL2Q14192 279 aa3.48□□□□□ -1.85
CCDC39-204ENST00000476379 UPK3BQ9BT76 320 aa3.48□□□□□ -1.85
CCDC39-204ENST00000476379 A0A0G2JQZ4 141 aa3.48□□□□□ -1.85
CCDC39-204ENST00000476379 A0A1W2PNN7 141 aa3.48□□□□□ -1.85
CCDC39-204ENST00000476379 SPANXDQ9BXN6 97 aa3.48□□□□□ -1.85
CCDC39-204ENST00000476379 NHLRC4P0CG21 123 aaPredicted RBP3.47□□□□□ -1.85
CCDC39-204ENST00000476379 FAM19A5Q7Z5A7 132 aaPredicted RBP3.47□□□□□ -1.85
CCDC39-204ENST00000476379 LINC00643Q86TS7 51 aa3.47□□□□□ -1.85
CCDC39-204ENST00000476379 HIGD2AQ9BW72 106 aa3.47□□□□□ -1.85
CCDC39-204ENST00000476379 CSDC2Q9Y534 153 aaKnown RBP3.47□□□□□ -1.85
CCDC39-204ENST00000476379 WFDC10BQ8IUB3 73 aa3.47□□□□□ -1.85
CCDC39-204ENST00000476379 TRBV10-3A0A0K0K1G6 114 aa3.46□□□□□ -1.85
CCDC39-204ENST00000476379 F8WDY8 70 aa3.46□□□□□ -1.85
CCDC39-204ENST00000476379 LINC01546A6NGU7 62 aa3.46□□□□□ -1.86
CCDC39-204ENST00000476379 FSHBP01225 129 aa3.46□□□□□ -1.86
CCDC39-204ENST00000476379 SPART-AS1P0CW21 52 aa3.46□□□□□ -1.86
CCDC39-204ENST00000476379 UBE2DNLQ8IWF7 75 aa3.46□□□□□ -1.86
CCDC39-204ENST00000476379 FUSP35637 526 aaKnown RBP eCLIP3.46□□□□□ -1.86
CCDC39-204ENST00000476379 Q6ZTC4 211 aa3.46□□□□□ -1.86
CCDC39-204ENST00000476379 A6NED7 52 aa3.45□□□□□ -1.86
CCDC39-204ENST00000476379 H0YGX0 51 aa3.45□□□□□ -1.86
CCDC39-204ENST00000476379 M0R2N4 97 aa3.45□□□□□ -1.86
CCDC39-204ENST00000476379 FAM104AQ969W3 186 aa3.45□□□□□ -1.86
CCDC39-204ENST00000476379 TRBV6-4A0A1B0GX49 114 aa3.45□□□□□ -1.86
CCDC39-204ENST00000476379 CCKP06307 115 aa3.45□□□□□ -1.86
CCDC39-204ENST00000476379 IGHV4-30-4P0DP06 118 aa3.45□□□□□ -1.86
CCDC39-204ENST00000476379 APOC4P55056 127 aa3.44□□□□□ -1.86
CCDC39-204ENST00000476379 PMAIP1Q13794 54 aa3.44□□□□□ -1.86
CCDC39-204ENST00000476379 IGHV3OR16-9A0A0B4J2B5 98 aa3.44□□□□□ -1.86
CCDC39-204ENST00000476379 IBA57-AS1B1ANH7 110 aa3.44□□□□□ -1.86
CCDC39-204ENST00000476379 KPRPQ5T749 579 aaPredicted RBP3.44□□□□□ -1.86
CCDC39-204ENST00000476379 DIRC1Q969H9 104 aa3.44□□□□□ -1.86
CCDC39-204ENST00000476379 IGLV1-51P01701 117 aa3.44□□□□□ -1.86
CCDC39-204ENST00000476379 RMI2Q96E14 147 aa3.44□□□□□ -1.86
CCDC39-204ENST00000476379 ATOX1O00244 68 aa3.43□□□□□ -1.86
CCDC39-204ENST00000476379 NREPQ16612 68 aa3.43□□□□□ -1.86
CCDC39-204ENST00000476379 Q6Q795 121 aa3.43□□□□□ -1.86
CCDC39-204ENST00000476379 FLG2Q5D862 2391 aaPredicted RBP3.43□□□□□ -1.86
CCDC39-204ENST00000476379 GIG44P09565 113 aaPredicted RBP3.43□□□□□ -1.86
CCDC39-204ENST00000476379 WFDC13Q8IUB5 93 aa3.43□□□□□ -1.86
CCDC39-204ENST00000476379 A0A087WZ39 114 aa3.43□□□□□ -1.86
CCDC39-204ENST00000476379 FAM30AQ9NZY2 134 aa3.43□□□□□ -1.86
CCDC39-204ENST00000476379 ETDCA0A1B0GVM5 59 aa3.42□□□□□ -1.86
CCDC39-204ENST00000476379 BPY2O14599 106 aa3.42□□□□□ -1.86
CCDC39-204ENST00000476379 UQCRQO14949 82 aa3.42□□□□□ -1.86
CCDC39-204ENST00000476379 KRTAP10-11P60412 298 aa3.42□□□□□ -1.86
CCDC39-204ENST00000476379 BEAN1Q3B7T3 259 aa3.42□□□□□ -1.86
CCDC39-204ENST00000476379 DEFB131BA0A096LNP1 70 aa3.42□□□□□ -1.86
CCDC39-204ENST00000476379 IGLV5-39A0A0G2JS06 123 aa3.42□□□□□ -1.86
CCDC39-204ENST00000476379 TMEM256-PLSCR3K7ERE1 68 aa3.42□□□□□ -1.86
CCDC39-204ENST00000476379 RPL28P46779 137 aaKnown RBP3.42□□□□□ -1.86
CCDC39-204ENST00000476379 C9orf66Q5T8R8 295 aa3.42□□□□□ -1.86
CCDC39-204ENST00000476379 CYSTM1Q9H1C7 97 aa3.42□□□□□ -1.86
CCDC39-204ENST00000476379 ACYP1P07311 99 aa3.42□□□□□ -1.86
CCDC39-204ENST00000476379 COX7BP24311 80 aa3.42□□□□□ -1.86
CCDC39-204ENST00000476379 CD164L2Q6UWJ8 174 aa3.42□□□□□ -1.86
CCDC39-204ENST00000476379 Q8N814 137 aa3.42□□□□□ -1.86
CCDC39-204ENST00000476379 OVOL2Q9BRP0 275 aa3.42□□□□□ -1.86
CCDC39-204ENST00000476379 SMIM26A0A096LP01 95 aa3.42□□□□□ -1.86
CCDC39-204ENST00000476379 COX7CP15954 63 aa3.41□□□□□ -1.86
CCDC39-204ENST00000476379 C4orf26Q17RF5 130 aa3.41□□□□□ -1.86
CCDC39-204ENST00000476379 Q6ZRU5 148 aa3.41□□□□□ -1.86
CCDC39-204ENST00000476379 F8WEM9 126 aa3.41□□□□□ -1.86
CCDC39-204ENST00000476379 NDUFS5O43920 106 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms