RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 PDE6GP18545 87 aa12.13□□□□□ -0.47
CCM2-207ENST00000475551 Q8NDZ9 215 aa12.13□□□□□ -0.47
CCM2-207ENST00000475551 WFDC10AQ9H1F0 79 aa12.13□□□□□ -0.47
CCM2-207ENST00000475551 TRAV10A0A0B4J240 114 aa12.13□□□□□ -0.47
CCM2-207ENST00000475551 M0R2N4 97 aa12.13□□□□□ -0.47
CCM2-207ENST00000475551 HAMPP81172 84 aa12.13□□□□□ -0.47
CCM2-207ENST00000475551 CLPSL2Q6UWE3 100 aa12.13□□□□□ -0.47
CCM2-207ENST00000475551 CD164L2Q6UWJ8 174 aa12.13□□□□□ -0.47
CCM2-207ENST00000475551 C9orf66Q5T8R8 295 aa12.12□□□□□ -0.47
CCM2-207ENST00000475551 C19orf73Q9NVV2 129 aa12.12□□□□□ -0.47
CCM2-207ENST00000475551 CUBNO60494 3623 aa12.12□□□□□ -0.47
CCM2-207ENST00000475551 H3BQ85 93 aa12.12□□□□□ -0.47
CCM2-207ENST00000475551 NOTCH3Q9UM47 2321 aa12.11□□□□□ -0.47
CCM2-207ENST00000475551 INAFM1C9JVW0 142 aa12.11□□□□□ -0.47
CCM2-207ENST00000475551 GYPEP15421 78 aa12.11□□□□□ -0.47
CCM2-207ENST00000475551 C9orf116Q5BN46 136 aaPredicted RBP12.1□□□□□ -0.47
CCM2-207ENST00000475551 RMI2Q96E14 147 aa12.09□□□□□ -0.47
CCM2-207ENST00000475551 LINC00612Q8N6U2 182 aa12.08□□□□□ -0.48
CCM2-207ENST00000475551 MUC7Q8TAX7 377 aa12.08□□□□□ -0.48
CCM2-207ENST00000475551 SNURFQ9Y675 71 aa12.08□□□□□ -0.48
CCM2-207ENST00000475551 HIVEP2P31629 2446 aa12.08□□□□□ -0.48
CCM2-207ENST00000475551 DEFB130BP0DP73 79 aa12.08□□□□□ -0.48
CCM2-207ENST00000475551 DEFB130AP0DP74 79 aa12.08□□□□□ -0.48
CCM2-207ENST00000475551 SMIM26A0A096LP01 95 aa12.07□□□□□ -0.48
CCM2-207ENST00000475551 NDUFC1O43677 76 aa12.07□□□□□ -0.48
CCM2-207ENST00000475551 LINC00269Q8N2A0 174 aa12.07□□□□□ -0.48
CCM2-207ENST00000475551 CHCHD10Q8WYQ3 142 aaPredicted RBP12.07□□□□□ -0.48
CCM2-207ENST00000475551 PRO0628Q9UI54 55 aa12.07□□□□□ -0.48
CCM2-207ENST00000475551 F8P00451 2351 aa12.07□□□□□ -0.48
CCM2-207ENST00000475551 F8WEM9 126 aa12.06□□□□□ -0.48
CCM2-207ENST00000475551 IGLV6-57P01721 117 aa12.06□□□□□ -0.48
CCM2-207ENST00000475551 Q6ZQY7 126 aa12.05□□□□□ -0.48
CCM2-207ENST00000475551 LINC00336Q6ZUF6 198 aa12.05□□□□□ -0.48
CCM2-207ENST00000475551 Q8N3U1 123 aa12.05□□□□□ -0.48
CCM2-207ENST00000475551 IGLV1-51P01701 117 aa12.04□□□□□ -0.48
CCM2-207ENST00000475551 C16orf95Q9H693 158 aa12.04□□□□□ -0.48
CCM2-207ENST00000475551 MTORP42345 2549 aa12.03□□□□□ -0.48
CCM2-207ENST00000475551 MAST4O15021 2626 aa12.03□□□□□ -0.48
CCM2-207ENST00000475551 FP248Q71RG6 208 aaPredicted RBP12.03□□□□□ -0.48
CCM2-207ENST00000475551 SPATA3Q8NHX4 192 aa12.03□□□□□ -0.48
CCM2-207ENST00000475551 PRO0255Q9UI72 69 aa12.03□□□□□ -0.48
CCM2-207ENST00000475551 TRBV7-4A0A0J9YYF1 115 aa12.02□□□□□ -0.48
CCM2-207ENST00000475551 ATP5EP56381 51 aaPredicted RBP12.02□□□□□ -0.48
CCM2-207ENST00000475551 NSD1Q96L73 2696 aaPredicted RBP12.02□□□□□ -0.49
CCM2-207ENST00000475551 ESM1Q9NQ30 184 aa12.02□□□□□ -0.49
CCM2-207ENST00000475551 IGLV10-54A0A075B6I4 117 aa12.01□□□□□ -0.49
CCM2-207ENST00000475551 DNAJC9-AS1A6NH13 148 aa12.01□□□□□ -0.49
CCM2-207ENST00000475551 REG3AQ06141 175 aa12.01□□□□□ -0.49
CCM2-207ENST00000475551 TM2D3Q9BRN9 247 aa12.01□□□□□ -0.49
CCM2-207ENST00000475551 FN1P02751 2386 aaKnown RBP12.01□□□□□ -0.49
CCM2-207ENST00000475551 A0A096LPF7 62 aa12□□□□□ -0.49
CCM2-207ENST00000475551 LINC01006Q8NI28 216 aa12□□□□□ -0.49
CCM2-207ENST00000475551 WNK1Q9H4A3 2382 aa11.99□□□□□ -0.49
CCM2-207ENST00000475551 A0A0J9YWU9 116 aa11.99□□□□□ -0.49
CCM2-207ENST00000475551 IGHV4-30-4P0DP06 118 aa11.99□□□□□ -0.49
CCM2-207ENST00000475551 C10orf25Q5T742 122 aa11.99□□□□□ -0.49
CCM2-207ENST00000475551 ANGP03950 147 aaKnown RBP11.99□□□□□ -0.49
CCM2-207ENST00000475551 UNQ6190/PRO20217Q6UXQ8 127 aa11.99□□□□□ -0.49
CCM2-207ENST00000475551 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.98□□□□□ -0.49
CCM2-207ENST00000475551 TRBV7-6A0A0J9YX20 115 aa11.98□□□□□ -0.49
CCM2-207ENST00000475551 MIFP14174 115 aa11.98□□□□□ -0.49
CCM2-207ENST00000475551 SPAG11BQ08648 103 aa11.97□□□□□ -0.49
CCM2-207ENST00000475551 ERC2-IT1O76042 136 aa11.96□□□□□ -0.49
CCM2-207ENST00000475551 DIRC1Q969H9 104 aa11.96□□□□□ -0.49
CCM2-207ENST00000475551 NREPQ16612 68 aa11.95□□□□□ -0.5
CCM2-207ENST00000475551 SCXQ7RTU7 201 aa11.95□□□□□ -0.5
CCM2-207ENST00000475551 TEP1Q99973 2627 aaKnown RBP11.95□□□□□ -0.5
CCM2-207ENST00000475551 TMEM254Q8TBM7 123 aa11.93□□□□□ -0.5
CCM2-207ENST00000475551 NIPBLQ6KC79 2804 aaeCLIP11.93□□□□□ -0.51e-6■■■■■ 35.4
CCM2-207ENST00000475551 BPY2O14599 106 aa11.92□□□□□ -0.5
CCM2-207ENST00000475551 X6R8D5 127 aa11.92□□□□□ -0.5
CCM2-207ENST00000475551 NF1P21359 2839 aa11.92□□□□□ -0.5
CCM2-207ENST00000475551 GVQW2A0A096LPI5 108 aaPredicted RBP11.92□□□□□ -0.5
CCM2-207ENST00000475551 COX7BP24311 80 aa11.92□□□□□ -0.5
CCM2-207ENST00000475551 LINC00474Q9P2X8 69 aa11.91□□□□□ -0.5
CCM2-207ENST00000475551 ZNF73O43830 326 aaPredicted RBP11.91□□□□□ -0.5
CCM2-207ENST00000475551 ELOF1P60002 83 aaKnown RBP11.91□□□□□ -0.5
CCM2-207ENST00000475551 JMJD1CQ15652 2540 aa11.9□□□□□ -0.5
CCM2-207ENST00000475551 LYRM9A8MSI8 78 aa11.87□□□□□ -0.51
CCM2-207ENST00000475551 C1orf43Q9BWL3 253 aa11.87□□□□□ -0.51
CCM2-207ENST00000475551 IGKV4-1P06312 121 aa11.85□□□□□ -0.51
CCM2-207ENST00000475551 C6orf48Q9UBA6 75 aa11.85□□□□□ -0.51
CCM2-207ENST00000475551 OCR1Q9BZK8 76 aa11.84□□□□□ -0.51
CCM2-207ENST00000475551 A0A0U1RQV1 116 aa11.84□□□□□ -0.51
CCM2-207ENST00000475551 XAGE1AQ9HD64 81 aa11.84□□□□□ -0.51
CCM2-207ENST00000475551 PRR34Q9NV39 138 aa11.83□□□□□ -0.52
CCM2-207ENST00000475551 PRYO14603 147 aa11.83□□□□□ -0.52
CCM2-207ENST00000475551 CELA1Q9UNI1 258 aa11.83□□□□□ -0.52
CCM2-207ENST00000475551 LELP1Q5T871 98 aa11.8□□□□□ -0.52
CCM2-207ENST00000475551 Q8N9L7 120 aa11.8□□□□□ -0.52
CCM2-207ENST00000475551 VPREB1P12018 145 aa11.8□□□□□ -0.52
CCM2-207ENST00000475551 FAM229BQ4G0N7 80 aa11.8□□□□□ -0.52
CCM2-207ENST00000475551 LINC00528Q8N1L1 170 aa11.79□□□□□ -0.52
CCM2-207ENST00000475551 KLK12Q9UKR0 248 aa11.78□□□□□ -0.52
CCM2-207ENST00000475551 M0R378 163 aa11.78□□□□□ -0.52
CCM2-207ENST00000475551 FUSP35637 526 aaKnown RBP eCLIP11.78□□□□□ -0.52
CCM2-207ENST00000475551 PKIGQ9Y2B9 76 aa11.78□□□□□ -0.52
CCM2-207ENST00000475551 BRK1Q8WUW1 75 aa11.77□□□□□ -0.53
CCM2-207ENST00000475551 Q6ZTC4 211 aa11.77□□□□□ -0.53
CCM2-207ENST00000475551 SETD2Q9BYW2 2564 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms