RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 LINC00269Q8N2A0 174 aa2.13□□□□□ -2.07
SDHB-205ENST00000475506 Q8N2B8 174 aa2.13□□□□□ -2.07
SDHB-205ENST00000475506 LEAP2Q969E1 77 aa2.13□□□□□ -2.07
SDHB-205ENST00000475506 LIMD2Q9BT23 127 aa2.13□□□□□ -2.07
SDHB-205ENST00000475506 USF3Q68DE3 2245 aa2.12□□□□□ -2.07
SDHB-205ENST00000475506 B4DSR2 109 aa2.12□□□□□ -2.07
SDHB-205ENST00000475506 NCR3O14931 201 aa2.12□□□□□ -2.07
SDHB-205ENST00000475506 NDUFB1O75438 58 aa2.12□□□□□ -2.07
SDHB-205ENST00000475506 RNASE3P12724 160 aaKnown RBP2.12□□□□□ -2.07
SDHB-205ENST00000475506 KRTAP12-4P60329 112 aa2.12□□□□□ -2.07
SDHB-205ENST00000475506 RPL39P62891 51 aaKnown RBP2.12□□□□□ -2.07
SDHB-205ENST00000475506 C10orf55Q5SWW7 151 aa2.12□□□□□ -2.07
SDHB-205ENST00000475506 SPTSSBQ8NFR3 76 aa2.12□□□□□ -2.07
SDHB-205ENST00000475506 BPESC1Q9GZL8 116 aa2.12□□□□□ -2.07
SDHB-205ENST00000475506 ESPL1Q14674 2120 aa2.12□□□□□ -2.07
SDHB-205ENST00000475506 TRBV7-4A0A0J9YYF1 115 aa2.11□□□□□ -2.07
SDHB-205ENST00000475506 hDV103S1A0JD37 113 aa2.11□□□□□ -2.07
SDHB-205ENST00000475506 CHKB-CPT1BH3BT56 60 aa2.11□□□□□ -2.07
SDHB-205ENST00000475506 DIRC1Q969H9 104 aa2.11□□□□□ -2.07
SDHB-205ENST00000475506 MED12Q93074 2177 aa2.1□□□□□ -2.07
SDHB-205ENST00000475506 LOC110117498A0A087WWA1 95 aa2.1□□□□□ -2.07
SDHB-205ENST00000475506 TRBV6-8A0A0A6YYG3 113 aa2.1□□□□□ -2.07
SDHB-205ENST00000475506 TRAV10A0A0B4J240 114 aa2.1□□□□□ -2.07
SDHB-205ENST00000475506 TRAV22A0A0B4J277 110 aa2.1□□□□□ -2.07
SDHB-205ENST00000475506 J3QKU1 62 aa2.1□□□□□ -2.07
SDHB-205ENST00000475506 K7EIM0 57 aa2.1□□□□□ -2.07
SDHB-205ENST00000475506 ROMO1P60602 79 aa2.1□□□□□ -2.07
SDHB-205ENST00000475506 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.1□□□□□ -2.07
SDHB-205ENST00000475506 WFDC9Q8NEX5 89 aa2.1□□□□□ -2.07
SDHB-205ENST00000475506 C22orf24Q9Y442 160 aa2.1□□□□□ -2.07
SDHB-205ENST00000475506 POLEQ07864 2286 aa2.09□□□□□ -2.07
SDHB-205ENST00000475506 HCG22E2RYF7 251 aa2.09□□□□□ -2.07
SDHB-205ENST00000475506 TFF1P04155 84 aa2.09□□□□□ -2.07
SDHB-205ENST00000475506 APELAP0DMC3 54 aa2.09□□□□□ -2.07
SDHB-205ENST00000475506 LINC00158P58513 81 aa2.09□□□□□ -2.07
SDHB-205ENST00000475506 ELOF1P60002 83 aaKnown RBP2.09□□□□□ -2.07
SDHB-205ENST00000475506 FAM74A4Q5TZK3 123 aa2.09□□□□□ -2.07
SDHB-205ENST00000475506 SMIM11BQ8TCY0 68 aa2.09□□□□□ -2.07
SDHB-205ENST00000475506 GAFA1Q96PS6 74 aa2.09□□□□□ -2.07
SDHB-205ENST00000475506 KNTC1P50748 2209 aa2.09□□□□□ -2.08
SDHB-205ENST00000475506 TRBV10-1A0A0K0K1A3 114 aa2.08□□□□□ -2.08
SDHB-205ENST00000475506 M0QY20 66 aa2.08□□□□□ -2.08
SDHB-205ENST00000475506 CCL4P13236 92 aa2.08□□□□□ -2.08
SDHB-205ENST00000475506 DEFB133Q30KQ1 61 aa2.08□□□□□ -2.08
SDHB-205ENST00000475506 ASB16-AS1Q495Z4 193 aa2.08□□□□□ -2.08
SDHB-205ENST00000475506 Q8N814 137 aa2.08□□□□□ -2.08
SDHB-205ENST00000475506 DEFB108BQ8NET1 73 aa2.08□□□□□ -2.08
SDHB-205ENST00000475506 RETNLBQ9BQ08 111 aa2.08□□□□□ -2.08
SDHB-205ENST00000475506 IGKV2-29A2NJV5 120 aaPredicted RBP2.07□□□□□ -2.08
SDHB-205ENST00000475506 C5orf67F2Z3F1 127 aa2.07□□□□□ -2.08
SDHB-205ENST00000475506 PI4KAP42356 2102 aa2.07□□□□□ -2.08
SDHB-205ENST00000475506 C9orf116Q5BN46 136 aaPredicted RBP2.07□□□□□ -2.08
SDHB-205ENST00000475506 CASC2Q6XLA1 102 aa2.07□□□□□ -2.08
SDHB-205ENST00000475506 LINC00467Q9BRT7 94 aa2.07□□□□□ -2.08
SDHB-205ENST00000475506 PRR15LQ9BU68 103 aa2.07□□□□□ -2.08
SDHB-205ENST00000475506 CDC42SE1Q9NRR8 79 aa2.07□□□□□ -2.08
SDHB-205ENST00000475506 CDKN2A-AS1Q9UH64 79 aa2.07□□□□□ -2.08
SDHB-205ENST00000475506 ARFGEF3Q5TH69 2177 aa2.07□□□□□ -2.08
SDHB-205ENST00000475506 TRBV6-4A0A1B0GX49 114 aa2.06□□□□□ -2.08
SDHB-205ENST00000475506 A6NN06 94 aa2.06□□□□□ -2.08
SDHB-205ENST00000475506 IGLV1-51P01701 117 aa2.06□□□□□ -2.08
SDHB-205ENST00000475506 PRB4P10163 310 aaPredicted RBP2.06□□□□□ -2.08
SDHB-205ENST00000475506 CCL3L1P16619 93 aa2.06□□□□□ -2.08
SDHB-205ENST00000475506 DEFB114Q30KQ6 69 aa2.06□□□□□ -2.08
SDHB-205ENST00000475506 COX7B2Q8TF08 81 aa2.06□□□□□ -2.08
SDHB-205ENST00000475506 ZGRF1Q86YA3 2104 aa2.06□□□□□ -2.08
SDHB-205ENST00000475506 Q5VV11 94 aa2.05□□□□□ -2.08
SDHB-205ENST00000475506 LOC101927531A0A1B0GV80 90 aa2.04□□□□□ -2.08
SDHB-205ENST00000475506 ETDCA0A1B0GVM5 59 aa2.04□□□□□ -2.08
SDHB-205ENST00000475506 CLPSL1A2RUU4 121 aa2.04□□□□□ -2.08
SDHB-205ENST00000475506 COX7BP24311 80 aa2.04□□□□□ -2.08
SDHB-205ENST00000475506 CCL18P55774 89 aa2.04□□□□□ -2.08
SDHB-205ENST00000475506 C1orf137Q5JT78 98 aa2.04□□□□□ -2.08
SDHB-205ENST00000475506 C1orf134Q5TEV5 83 aa2.04□□□□□ -2.08
SDHB-205ENST00000475506 DEFB104AQ8WTQ1 72 aa2.04□□□□□ -2.08
SDHB-205ENST00000475506 LINC00208Q96KT6 92 aa2.04□□□□□ -2.08
SDHB-205ENST00000475506 KAAG1Q9UBP8 84 aa2.04□□□□□ -2.08
SDHB-205ENST00000475506 MED13Q9UHV7 2174 aa2.04□□□□□ -2.08
SDHB-205ENST00000475506 KLK9Q9UKQ9 250 aa2.04□□□□□ -2.08
SDHB-205ENST00000475506 TNCP24821 2201 aa2.03□□□□□ -2.08
SDHB-205ENST00000475506 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.03□□□□□ -2.08
SDHB-205ENST00000475506 NDUFA4O00483 81 aa2.03□□□□□ -2.08
SDHB-205ENST00000475506 CNBPP62633 177 aaKnown RBP2.03□□□□□ -2.08
SDHB-205ENST00000475506 COX17Q14061 63 aa2.03□□□□□ -2.08
SDHB-205ENST00000475506 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.03□□□□□ -2.08
SDHB-205ENST00000475506 LINC00575Q6W349 94 aa2.03□□□□□ -2.08
SDHB-205ENST00000475506 FDCSPQ8NFU4 85 aa2.03□□□□□ -2.08
SDHB-205ENST00000475506 WFDC10AQ9H1F0 79 aa2.03□□□□□ -2.08
SDHB-205ENST00000475506 CDC42SE2Q9NRR3 84 aa2.03□□□□□ -2.08
SDHB-205ENST00000475506 TOMM7Q9P0U1 55 aa2.03□□□□□ -2.08
SDHB-205ENST00000475506 LCE6AA0A183 80 aa2.02□□□□□ -2.09
SDHB-205ENST00000475506 C10orf142B7Z368 130 aa2.02□□□□□ -2.09
SDHB-205ENST00000475506 COX6A2Q02221 97 aa2.02□□□□□ -2.09
SDHB-205ENST00000475506 KLK9Q2XQG4 91 aa2.02□□□□□ -2.09
SDHB-205ENST00000475506 MINOS1Q5TGZ0 78 aa2.02□□□□□ -2.09
SDHB-205ENST00000475506 SPAG11BQ08648 103 aa2.01□□□□□ -2.09
SDHB-205ENST00000475506 UNQ6190/PRO20217Q6UXQ8 127 aa2.01□□□□□ -2.09
SDHB-205ENST00000475506 USMG5Q96IX5 58 aa2.01□□□□□ -2.09
SDHB-205ENST00000475506 PRRC2BQ5JSZ5 2229 aaKnown RBP2.01□□□□□ -2.09
SDHB-205ENST00000475506 H3BUA1 57 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 170.6 ms