RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 DPM2O94777 84 aa8.51□□□□□ -1.05
ATG9A-220ENST00000475339 ZNF625Q96I27 306 aaPredicted RBP8.51□□□□□ -1.05
ATG9A-220ENST00000475339 ERG28Q9UKR5 140 aa8.51□□□□□ -1.05
ATG9A-220ENST00000475339 HERVK_113P61574 105 aa8.5□□□□□ -1.05
ATG9A-220ENST00000475339 IGKCP01834 107 aa8.49□□□□□ -1.05
ATG9A-220ENST00000475339 LBHQ53QV2 105 aaPredicted RBP8.49□□□□□ -1.05
ATG9A-220ENST00000475339 C1orf137Q5JT78 98 aa8.49□□□□□ -1.05
ATG9A-220ENST00000475339 PMCHL2Q9BQD1 86 aa8.49□□□□□ -1.05
ATG9A-220ENST00000475339 COX17Q14061 63 aa8.48□□□□□ -1.05
ATG9A-220ENST00000475339 KRTAP7-1Q8IUC3 87 aa8.47□□□□□ -1.05
ATG9A-220ENST00000475339 C22orf24Q9Y442 160 aa8.47□□□□□ -1.05
ATG9A-220ENST00000475339 SYS1-DBNDD2H3BUS1 97 aa8.46□□□□□ -1.06
ATG9A-220ENST00000475339 LINC00158P58513 81 aa8.46□□□□□ -1.06
ATG9A-220ENST00000475339 MEIG1Q5JSS6 88 aa8.46□□□□□ -1.06
ATG9A-220ENST00000475339 COA6Q5JTJ3 125 aaKnown RBP8.46□□□□□ -1.06
ATG9A-220ENST00000475339 NKAPP1Q8N9T2 125 aa8.46□□□□□ -1.06
ATG9A-220ENST00000475339 PLEKHB2Q96CS7 222 aa8.46□□□□□ -1.06
ATG9A-220ENST00000475339 NDUFA12Q9UI09 145 aa8.46□□□□□ -1.06
ATG9A-220ENST00000475339 LEPROTO15243 131 aa8.45□□□□□ -1.06
ATG9A-220ENST00000475339 HERV-K104P63124 156 aa8.45□□□□□ -1.06
ATG9A-220ENST00000475339 MRPL55Q7Z7F7 128 aaKnown RBP8.45□□□□□ -1.06
ATG9A-220ENST00000475339 SND1-IT1Q9HBX3 110 aa8.45□□□□□ -1.06
ATG9A-220ENST00000475339 TP73-AS1Q9UF72 201 aa8.45□□□□□ -1.06
ATG9A-220ENST00000475339 MUC17Q685J3 4493 aa8.45□□□□□ -1.06
ATG9A-220ENST00000475339 A0A0U1RRA0 63 aa8.44□□□□□ -1.06
ATG9A-220ENST00000475339 MYMXA0A1B0GTQ4 84 aa8.44□□□□□ -1.06
ATG9A-220ENST00000475339 LGALS3P17931 250 aaKnown RBP8.44□□□□□ -1.06
ATG9A-220ENST00000475339 LINC00587B1AMM8 73 aa8.43□□□□□ -1.06
ATG9A-220ENST00000475339 PET117Q6UWS5 81 aa8.43□□□□□ -1.06
ATG9A-220ENST00000475339 GAGE10A6NGK3 116 aa8.42□□□□□ -1.06
ATG9A-220ENST00000475339 J3QQQ9 107 aa8.42□□□□□ -1.06
ATG9A-220ENST00000475339 IGLV7-43P04211 117 aa8.42□□□□□ -1.06
ATG9A-220ENST00000475339 KRTDAPP60985 99 aa8.42□□□□□ -1.06
ATG9A-220ENST00000475339 RPL24P83731 157 aaKnown RBP8.42□□□□□ -1.06
ATG9A-220ENST00000475339 KRTAP11-1Q8IUC1 163 aa8.42□□□□□ -1.06
ATG9A-220ENST00000475339 IGLV5-37A0A075B6J1 123 aa8.41□□□□□ -1.06
ATG9A-220ENST00000475339 C20orf202A1L168 122 aa8.41□□□□□ -1.06
ATG9A-220ENST00000475339 SMIM13P0DJ93 91 aa8.41□□□□□ -1.06
ATG9A-220ENST00000475339 NMUP48645 174 aa8.41□□□□□ -1.06
ATG9A-220ENST00000475339 TSPEAR-AS2P59090 65 aa8.41□□□□□ -1.06
ATG9A-220ENST00000475339 LINC01545Q5VT33 79 aa8.41□□□□□ -1.06
ATG9A-220ENST00000475339 KRTAP9-7A8MTY7 169 aa8.4□□□□□ -1.06
ATG9A-220ENST00000475339 C3orf79P0CE67 100 aa8.4□□□□□ -1.06
ATG9A-220ENST00000475339 RPL37AP8A6NKH3 93 aa8.39□□□□□ -1.07
ATG9A-220ENST00000475339 DIRC1Q969H9 104 aa8.39□□□□□ -1.07
ATG9A-220ENST00000475339 LINC00167Q96N53 147 aa8.39□□□□□ -1.07
ATG9A-220ENST00000475339 E9PLD3 99 aa8.38□□□□□ -1.07
ATG9A-220ENST00000475339 S100A6P06703 90 aa8.38□□□□□ -1.07
ATG9A-220ENST00000475339 VPREB1P12018 145 aa8.38□□□□□ -1.07
ATG9A-220ENST00000475339 S100A2P29034 98 aa8.38□□□□□ -1.07
ATG9A-220ENST00000475339 MIR7-3HGQ8N6C7 128 aa8.38□□□□□ -1.07
ATG9A-220ENST00000475339 IGLV1-50A0A075B6I6 118 aa8.37□□□□□ -1.07
ATG9A-220ENST00000475339 IGKV2-28A0A075B6P5 120 aa8.36□□□□□ -1.07
ATG9A-220ENST00000475339 IGKV2D-28P01615 120 aa8.36□□□□□ -1.07
ATG9A-220ENST00000475339 LINC01547P58512 204 aaPredicted RBP8.36□□□□□ -1.07
ATG9A-220ENST00000475339 BOD1L2Q8IYS8 172 aa8.36□□□□□ -1.07
ATG9A-220ENST00000475339 BCE1O60756 84 aa8.35□□□□□ -1.07
ATG9A-220ENST00000475339 TSPAN13O95857 204 aa8.35□□□□□ -1.07
ATG9A-220ENST00000475339 AKR1D1P51857 326 aa8.35□□□□□ -1.07
ATG9A-220ENST00000475339 MIEN1Q9BRT3 115 aa8.35□□□□□ -1.07
ATG9A-220ENST00000475339 H0Y9J4 135 aa8.34□□□□□ -1.07
ATG9A-220ENST00000475339 RPL28P46779 137 aaKnown RBP8.34□□□□□ -1.07
ATG9A-220ENST00000475339 ZNF861PO60384 105 aa8.33□□□□□ -1.08
ATG9A-220ENST00000475339 KRTAP1-4P0C5Y4 121 aa8.33□□□□□ -1.08
ATG9A-220ENST00000475339 HIST3H2BBQ8N257 126 aa8.33□□□□□ -1.08
ATG9A-220ENST00000475339 DAND5Q8N907 189 aa8.33□□□□□ -1.08
ATG9A-220ENST00000475339 Q8NDZ9 215 aa8.33□□□□□ -1.08
ATG9A-220ENST00000475339 M0R378 163 aa8.32□□□□□ -1.08
ATG9A-220ENST00000475339 NCR3O14931 201 aa8.32□□□□□ -1.08
ATG9A-220ENST00000475339 UBE2AP49459 152 aa8.32□□□□□ -1.08
ATG9A-220ENST00000475339 A0A0J9YXY3 114 aa8.31□□□□□ -1.08
ATG9A-220ENST00000475339 ZNF815PA8K554 130 aa8.31□□□□□ -1.08
ATG9A-220ENST00000475339 ATOH7Q8N100 152 aa8.31□□□□□ -1.08
ATG9A-220ENST00000475339 HIST1H2BLQ99880 126 aa8.31□□□□□ -1.08
ATG9A-220ENST00000475339 IGKV2D-26A0A0A0MRZ7 120 aa8.3□□□□□ -1.08
ATG9A-220ENST00000475339 TMEM238C9JI98 176 aa8.29□□□□□ -1.08
ATG9A-220ENST00000475339 S100A12P80511 92 aa8.29□□□□□ -1.08
ATG9A-220ENST00000475339 TMEM126AQ9H061 195 aa8.29□□□□□ -1.08
ATG9A-220ENST00000475339 CDIP1Q9H305 208 aa8.29□□□□□ -1.08
ATG9A-220ENST00000475339 RPL13AP40429 203 aaKnown RBP8.28□□□□□ -1.08
ATG9A-220ENST00000475339 NPC2P61916 151 aa8.28□□□□□ -1.08
ATG9A-220ENST00000475339 FAM19A1Q7Z5A9 133 aa8.28□□□□□ -1.08
ATG9A-220ENST00000475339 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.27□□□□□ -1.09
ATG9A-220ENST00000475339 SNRPEP62304 92 aaKnown RBP8.27□□□□□ -1.09
ATG9A-220ENST00000475339 SCGB1D4Q6XE38 83 aa8.27□□□□□ -1.09
ATG9A-220ENST00000475339 SPANXB1Q9NS25 103 aaPredicted RBP8.27□□□□□ -1.09
ATG9A-220ENST00000475339 LOC107984156A0A0G2JMH3 177 aa8.26□□□□□ -1.09
ATG9A-220ENST00000475339 PRYO14603 147 aa8.26□□□□□ -1.09
ATG9A-220ENST00000475339 TIMM17BO60830 172 aa8.26□□□□□ -1.09
ATG9A-220ENST00000475339 PRLHP81277 87 aa8.26□□□□□ -1.09
ATG9A-220ENST00000475339 ANKRD39Q53RE8 183 aa8.26□□□□□ -1.09
ATG9A-220ENST00000475339 ARL17AQ8IVW1 177 aa8.26□□□□□ -1.09
ATG9A-220ENST00000475339 TTTY13Q9BZ97 58 aa8.26□□□□□ -1.09
ATG9A-220ENST00000475339 HSBP1L1C9JCN9 74 aa8.25□□□□□ -1.09
ATG9A-220ENST00000475339 ADAMTSL4-AS1Q5T5F5 129 aa8.25□□□□□ -1.09
ATG9A-220ENST00000475339 TRBV10-3A0A0K0K1G6 114 aa8.24□□□□□ -1.09
ATG9A-220ENST00000475339 TRBV10-2A0A0K0K1G8 114 aa8.24□□□□□ -1.09
ATG9A-220ENST00000475339 S100A7L2Q5SY68 101 aa8.24□□□□□ -1.09
ATG9A-220ENST00000475339 NDUFC2O95298 119 aa8.23□□□□□ -1.09
ATG9A-220ENST00000475339 DDTP30046 118 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms