RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 LINC00158P58513 81 aa11.94□□□□□ -0.5
PDLIM4-206ENST00000474421 PRLHP81277 87 aa11.94□□□□□ -0.5
PDLIM4-206ENST00000474421 TMEM238C9JI98 176 aa11.93□□□□□ -0.5
PDLIM4-206ENST00000474421 KRTAP13-2Q52LG2 175 aa11.93□□□□□ -0.5
PDLIM4-206ENST00000474421 IFI27L1Q96BM0 104 aa11.93□□□□□ -0.5
PDLIM4-206ENST00000474421 IGKV2D-26A0A0A0MRZ7 120 aa11.92□□□□□ -0.5
PDLIM4-206ENST00000474421 TMEM223A0PJW6 202 aa11.92□□□□□ -0.5
PDLIM4-206ENST00000474421 M0R378 163 aa11.92□□□□□ -0.5
PDLIM4-206ENST00000474421 LINC00304Q8N9R0 145 aa11.9□□□□□ -0.5
PDLIM4-206ENST00000474421 YPEL4Q96NS1 127 aa11.9□□□□□ -0.5
PDLIM4-206ENST00000474421 ATP6V1G1O75348 118 aa11.89□□□□□ -0.51
PDLIM4-206ENST00000474421 CBLN2Q8IUK8 224 aa11.89□□□□□ -0.51
PDLIM4-206ENST00000474421 Q8NDZ9 215 aa11.89□□□□□ -0.51
PDLIM4-206ENST00000474421 CTAG1AP78358 180 aa11.88□□□□□ -0.51
PDLIM4-206ENST00000474421 PLEKHB2Q96CS7 222 aa11.87□□□□□ -0.51
PDLIM4-206ENST00000474421 A0A0U1RRA0 63 aa11.86□□□□□ -0.51
PDLIM4-206ENST00000474421 LINC00587B1AMM8 73 aa11.86□□□□□ -0.51
PDLIM4-206ENST00000474421 HSBP1O75506 76 aa11.86□□□□□ -0.51
PDLIM4-206ENST00000474421 HERV-K104P63124 156 aa11.86□□□□□ -0.51
PDLIM4-206ENST00000474421 MEIG1Q5JSS6 88 aa11.85□□□□□ -0.51
PDLIM4-206ENST00000474421 SMIM13P0DJ93 91 aa11.84□□□□□ -0.51
PDLIM4-206ENST00000474421 HIGD2AQ9BW72 106 aa11.84□□□□□ -0.51
PDLIM4-206ENST00000474421 MUC2Q02817 5179 aa11.82□□□□□ -0.52
PDLIM4-206ENST00000474421 BOD1L2Q8IYS8 172 aa11.82□□□□□ -0.52
PDLIM4-206ENST00000474421 MAP1LC3CQ9BXW4 147 aa11.82□□□□□ -0.52
PDLIM4-206ENST00000474421 MYMXA0A1B0GTQ4 84 aa11.81□□□□□ -0.52
PDLIM4-206ENST00000474421 PRYO14603 147 aa11.81□□□□□ -0.52
PDLIM4-206ENST00000474421 FAM19A2Q8N3H0 131 aa11.81□□□□□ -0.52
PDLIM4-206ENST00000474421 MIR7-3HGQ8N6C7 128 aa11.81□□□□□ -0.52
PDLIM4-206ENST00000474421 NDUFA12Q9UI09 145 aa11.81□□□□□ -0.52
PDLIM4-206ENST00000474421 ZNF706Q9Y5V0 76 aaPredicted RBP11.81□□□□□ -0.52
PDLIM4-206ENST00000474421 A0A0U1RQV1 116 aa11.79□□□□□ -0.52
PDLIM4-206ENST00000474421 LINC00337Q8N6G1 96 aa11.78□□□□□ -0.52
PDLIM4-206ENST00000474421 SPRR4Q96PI1 79 aa11.78□□□□□ -0.52
PDLIM4-206ENST00000474421 RETNLBQ9BQ08 111 aa11.78□□□□□ -0.52
PDLIM4-206ENST00000474421 H0Y8G0 127 aa11.77□□□□□ -0.53
PDLIM4-206ENST00000474421 NCR3O14931 201 aa11.77□□□□□ -0.53
PDLIM4-206ENST00000474421 LEPROTL1O95214 131 aa11.77□□□□□ -0.53
PDLIM4-206ENST00000474421 S100A12P80511 92 aa11.77□□□□□ -0.53
PDLIM4-206ENST00000474421 SPAG11AQ6PDA7 123 aa11.77□□□□□ -0.53
PDLIM4-206ENST00000474421 KCNQ1DNQ9H478 68 aa11.77□□□□□ -0.53
PDLIM4-206ENST00000474421 SLC7A5P1Q8MH63 180 aa11.76□□□□□ -0.53
PDLIM4-206ENST00000474421 C3orf22Q8N5N4 141 aa11.76□□□□□ -0.53
PDLIM4-206ENST00000474421 TRGC2P03986 189 aa11.75□□□□□ -0.53
PDLIM4-206ENST00000474421 PLNP26678 52 aa11.75□□□□□ -0.53
PDLIM4-206ENST00000474421 SPRR1AP35321 89 aa11.75□□□□□ -0.53
PDLIM4-206ENST00000474421 ETDCA0A1B0GVM5 59 aa11.74□□□□□ -0.53
PDLIM4-206ENST00000474421 LEPROTO15243 131 aa11.74□□□□□ -0.53
PDLIM4-206ENST00000474421 HSPB8Q9UJY1 196 aa11.74□□□□□ -0.53
PDLIM4-206ENST00000474421 IGLV7-46A0A075B6I9 117 aa11.73□□□□□ -0.53
PDLIM4-206ENST00000474421 TPRXLQ17RH7 258 aa11.73□□□□□ -0.53
PDLIM4-206ENST00000474421 SERF1AO75920 110 aa11.72□□□□□ -0.53
PDLIM4-206ENST00000474421 HERVK_113P61574 105 aa11.72□□□□□ -0.53
PDLIM4-206ENST00000474421 C4orf48Q5BLP8 95 aa11.72□□□□□ -0.53
PDLIM4-206ENST00000474421 LOC107984156A0A0G2JMH3 177 aa11.71□□□□□ -0.53
PDLIM4-206ENST00000474421 TRBV10-3A0A0K0K1G6 114 aa11.71□□□□□ -0.53
PDLIM4-206ENST00000474421 ARL17AQ8IVW1 177 aa11.71□□□□□ -0.53
PDLIM4-206ENST00000474421 CDIP1Q9H305 208 aa11.71□□□□□ -0.53
PDLIM4-206ENST00000474421 KRTAP4-16G5E9R7 235 aaPredicted RBP11.7□□□□□ -0.54
PDLIM4-206ENST00000474421 SMCR5Q8TEV8 140 aa11.7□□□□□ -0.54
PDLIM4-206ENST00000474421 TRBV10-2A0A0K0K1G8 114 aa11.69□□□□□ -0.54
PDLIM4-206ENST00000474421 J3QQQ9 107 aa11.69□□□□□ -0.54
PDLIM4-206ENST00000474421 DPM2O94777 84 aa11.69□□□□□ -0.54
PDLIM4-206ENST00000474421 NMUP48645 174 aa11.69□□□□□ -0.54
PDLIM4-206ENST00000474421 LINC00310P59036 64 aa11.69□□□□□ -0.54
PDLIM4-206ENST00000474421 TSPEAR-AS2P59090 65 aa11.69□□□□□ -0.54
PDLIM4-206ENST00000474421 MIEN1Q9BRT3 115 aa11.68□□□□□ -0.54
PDLIM4-206ENST00000474421 IGKCP01834 107 aa11.66□□□□□ -0.54
PDLIM4-206ENST00000474421 FABP4P15090 132 aa11.66□□□□□ -0.54
PDLIM4-206ENST00000474421 LGALS3P17931 250 aaKnown RBP11.66□□□□□ -0.54
PDLIM4-206ENST00000474421 DDTP30046 118 aa11.66□□□□□ -0.54
PDLIM4-206ENST00000474421 DAND5Q8N907 189 aa11.66□□□□□ -0.54
PDLIM4-206ENST00000474421 SPANXB1Q9NS25 103 aaPredicted RBP11.66□□□□□ -0.54
PDLIM4-206ENST00000474421 LINC00483Q53H64 154 aa11.65□□□□□ -0.54
PDLIM4-206ENST00000474421 FP248Q71RG6 208 aaPredicted RBP11.65□□□□□ -0.54
PDLIM4-206ENST00000474421 Q8NBF4 154 aa11.65□□□□□ -0.54
PDLIM4-206ENST00000474421 PPDPFQ9H3Y8 114 aa11.65□□□□□ -0.54
PDLIM4-206ENST00000474421 B5MCH6 92 aa11.64□□□□□ -0.55
PDLIM4-206ENST00000474421 NDUFC2O95298 119 aa11.62□□□□□ -0.55
PDLIM4-206ENST00000474421 PMCHL2Q9BQD1 86 aa11.62□□□□□ -0.55
PDLIM4-206ENST00000474421 SPINK1P00995 79 aa11.61□□□□□ -0.55
PDLIM4-206ENST00000474421 S100A7L2Q5SY68 101 aa11.61□□□□□ -0.55
PDLIM4-206ENST00000474421 GAGE2AQ6NT46 116 aa11.61□□□□□ -0.55
PDLIM4-206ENST00000474421 MUC17Q685J3 4493 aa11.6□□□□□ -0.55
PDLIM4-206ENST00000474421 COLCA2A8K830 154 aa11.6□□□□□ -0.55
PDLIM4-206ENST00000474421 Q6ZRX8 168 aa11.6□□□□□ -0.55
PDLIM4-206ENST00000474421 S100A1P23297 94 aa11.59□□□□□ -0.55
PDLIM4-206ENST00000474421 IGLV6-57P01721 117 aa11.58□□□□□ -0.56
PDLIM4-206ENST00000474421 JOSD1Q15040 202 aaPredicted RBP11.57□□□□□ -0.56
PDLIM4-206ENST00000474421 SSBP3-AS1Q7Z2R9 100 aa11.57□□□□□ -0.56
PDLIM4-206ENST00000474421 E9PLD3 99 aa11.56□□□□□ -0.56
PDLIM4-206ENST00000474421 ERC2-IT1O76042 136 aa11.56□□□□□ -0.56
PDLIM4-206ENST00000474421 Q9BRP9 147 aa11.56□□□□□ -0.56
PDLIM4-206ENST00000474421 CBY1Q9Y3M2 126 aa11.56□□□□□ -0.56
PDLIM4-206ENST00000474421 TRAV23DV6A0A075B6W5 121 aa11.55□□□□□ -0.56
PDLIM4-206ENST00000474421 A0A0J9YXY3 114 aa11.55□□□□□ -0.56
PDLIM4-206ENST00000474421 MOBPQ13875 183 aa11.55□□□□□ -0.56
PDLIM4-206ENST00000474421 IGLV9-49A0A0B4J1Y8 123 aa11.54□□□□□ -0.56
PDLIM4-206ENST00000474421 RPS29P62273 56 aaKnown RBP11.54□□□□□ -0.56
PDLIM4-206ENST00000474421 ZNF73O43830 326 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms