RNA–Protein interactions for RNA: ENST00000474336.5

PKNOX1-205, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-205ENST00000474336 UNQ6190/PRO20217Q6UXQ8 127 aa4.97□□□□□ -1.61
PKNOX1-205ENST00000474336 Q6ZRU5 148 aa4.97□□□□□ -1.61
PKNOX1-205ENST00000474336 DAND5Q8N907 189 aa4.97□□□□□ -1.61
PKNOX1-205ENST00000474336 CARD19Q96LW7 228 aa4.97□□□□□ -1.61
PKNOX1-205ENST00000474336 HIGD1BQ9P298 99 aa4.97□□□□□ -1.61
PKNOX1-205ENST00000474336 DNAH6Q9C0G6 4158 aa4.97□□□□□ -1.61
PKNOX1-205ENST00000474336 IGKV2D-30A0A075B6S6 120 aa4.96□□□□□ -1.62
PKNOX1-205ENST00000474336 LINC00587B1AMM8 73 aa4.96□□□□□ -1.62
PKNOX1-205ENST00000474336 HINT1P49773 126 aaPredicted RBP4.96□□□□□ -1.62
PKNOX1-205ENST00000474336 C9orf116Q5BN46 136 aaPredicted RBP4.96□□□□□ -1.62
PKNOX1-205ENST00000474336 C10orf25Q5T742 122 aa4.96□□□□□ -1.62
PKNOX1-205ENST00000474336 Q6ZRN7 208 aaPredicted RBP4.96□□□□□ -1.62
PKNOX1-205ENST00000474336 C2orf48Q96LS8 159 aa4.96□□□□□ -1.62
PKNOX1-205ENST00000474336 C6orf48Q9UBA6 75 aa4.96□□□□□ -1.62
PKNOX1-205ENST00000474336 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.95□□□□□ -1.62
PKNOX1-205ENST00000474336 TRBV30A0A0K0K1B3 111 aa4.95□□□□□ -1.62
PKNOX1-205ENST00000474336 M0R143 59 aa4.95□□□□□ -1.62
PKNOX1-205ENST00000474336 TIMM17BO60830 172 aa4.95□□□□□ -1.62
PKNOX1-205ENST00000474336 RPL18AQ02543 176 aaKnown RBP4.95□□□□□ -1.62
PKNOX1-205ENST00000474336 MIR7-3HGQ8N6C7 128 aa4.95□□□□□ -1.62
PKNOX1-205ENST00000474336 SPANXB1Q9NS25 103 aaPredicted RBP4.95□□□□□ -1.62
PKNOX1-205ENST00000474336 F8WDY8 70 aa4.94□□□□□ -1.62
PKNOX1-205ENST00000474336 TAL2Q16559 108 aa4.94□□□□□ -1.62
PKNOX1-205ENST00000474336 ADAMTSL4-AS1Q5T5F5 129 aa4.94□□□□□ -1.62
PKNOX1-205ENST00000474336 CEND1Q8N111 149 aa4.94□□□□□ -1.62
PKNOX1-205ENST00000474336 SPANXDQ9BXN6 97 aa4.94□□□□□ -1.62
PKNOX1-205ENST00000474336 SPANXCQ9NY87 97 aa4.94□□□□□ -1.62
PKNOX1-205ENST00000474336 SACSQ9NZJ4 4579 aa4.94□□□□□ -1.62
PKNOX1-205ENST00000474336 HYDINQ4G0P3 5121 aa4.93□□□□□ -1.62
PKNOX1-205ENST00000474336 A0A087WTM6 91 aa4.93□□□□□ -1.62
PKNOX1-205ENST00000474336 LRCOL1A6NCL2 159 aa4.93□□□□□ -1.62
PKNOX1-205ENST00000474336 COX17Q14061 63 aa4.93□□□□□ -1.62
PKNOX1-205ENST00000474336 GAGE2EQ4V326 116 aa4.93□□□□□ -1.62
PKNOX1-205ENST00000474336 MUSTN1Q8IVN3 82 aa4.93□□□□□ -1.62
PKNOX1-205ENST00000474336 Q8N814 137 aa4.93□□□□□ -1.62
PKNOX1-205ENST00000474336 COPS9Q8WXC6 57 aa4.93□□□□□ -1.62
PKNOX1-205ENST00000474336 LITAFQ99732 161 aa4.93□□□□□ -1.62
PKNOX1-205ENST00000474336 GAGE2DQ9UEU5 116 aa4.93□□□□□ -1.62
PKNOX1-205ENST00000474336 DNAH2Q9P225 4427 aa4.93□□□□□ -1.62
PKNOX1-205ENST00000474336 NDUFC2-KCTD14E9PQ53 114 aa4.92□□□□□ -1.62
PKNOX1-205ENST00000474336 FXYD2P54710 66 aa4.92□□□□□ -1.62
PKNOX1-205ENST00000474336 RPL24P83731 157 aaKnown RBP4.92□□□□□ -1.62
PKNOX1-205ENST00000474336 BVES-AS1Q5T3Y7 98 aa4.92□□□□□ -1.62
PKNOX1-205ENST00000474336 Q6ZVH6 145 aa4.92□□□□□ -1.62
PKNOX1-205ENST00000474336 LINC00308Q8TCZ7 52 aa4.92□□□□□ -1.62
PKNOX1-205ENST00000474336 XAGE1AQ9HD64 81 aa4.92□□□□□ -1.62
PKNOX1-205ENST00000474336 NHP2Q9NX24 153 aaKnown RBP4.92□□□□□ -1.62
PKNOX1-205ENST00000474336 IFITM1P13164 125 aa4.91□□□□□ -1.62
PKNOX1-205ENST00000474336 FUSP35637 526 aaKnown RBP eCLIP4.91□□□□□ -1.62
PKNOX1-205ENST00000474336 CNBPP62633 177 aaKnown RBP4.91□□□□□ -1.62
PKNOX1-205ENST00000474336 GAGE2BQ13066 116 aa4.91□□□□□ -1.62
PKNOX1-205ENST00000474336 C21orf62-AS1Q17RA5 79 aa4.91□□□□□ -1.62
PKNOX1-205ENST00000474336 SND1-IT1Q9HBX3 110 aa4.91□□□□□ -1.62
PKNOX1-205ENST00000474336 KMT2AQ03164 3969 aa4.91□□□□□ -1.62
PKNOX1-205ENST00000474336 DNAH17Q9UFH2 4485 aa4.91□□□□□ -1.62
PKNOX1-205ENST00000474336 IGLV5-52A0A0A0MRZ9 124 aa4.9□□□□□ -1.63
PKNOX1-205ENST00000474336 IGKV2-24A0A0C4DH68 120 aa4.9□□□□□ -1.63
PKNOX1-205ENST00000474336 LOC107984640A0A0U1RRK4 108 aa4.9□□□□□ -1.63
PKNOX1-205ENST00000474336 A4D1N5 150 aa4.9□□□□□ -1.63
PKNOX1-205ENST00000474336 A6NDN8 102 aa4.9□□□□□ -1.63
PKNOX1-205ENST00000474336 K7ERJ3 54 aa4.9□□□□□ -1.63
PKNOX1-205ENST00000474336 RTL8CO15255 209 aa4.9□□□□□ -1.63
PKNOX1-205ENST00000474336 LINC01620Q4KN68 170 aa4.9□□□□□ -1.63
PKNOX1-205ENST00000474336 SOSTDC1Q6X4U4 206 aa4.9□□□□□ -1.63
PKNOX1-205ENST00000474336 RAB37Q96AX2 223 aa4.9□□□□□ -1.63
PKNOX1-205ENST00000474336 SNHG12Q9BXW3 62 aa4.9□□□□□ -1.63
PKNOX1-205ENST00000474336 PKIGQ9Y2B9 76 aa4.9□□□□□ -1.63
PKNOX1-205ENST00000474336 NCR3O14931 201 aa4.89□□□□□ -1.63
PKNOX1-205ENST00000474336 Q6ZRP5 223 aa4.89□□□□□ -1.63
PKNOX1-205ENST00000474336 H7C2G1 150 aa4.88□□□□□ -1.63
PKNOX1-205ENST00000474336 Q1RN00 199 aa4.88□□□□□ -1.63
PKNOX1-205ENST00000474336 KRTAP5-1Q6L8H4 278 aa4.88□□□□□ -1.63
PKNOX1-205ENST00000474336 A0A096LNI7 61 aa4.87□□□□□ -1.63
PKNOX1-205ENST00000474336 TLX1NBP0CAT3 122 aa4.87□□□□□ -1.63
PKNOX1-205ENST00000474336 COL5A1-AS1Q5SY13 56 aa4.87□□□□□ -1.63
PKNOX1-205ENST00000474336 FAM19A5Q7Z5A7 132 aaPredicted RBP4.87□□□□□ -1.63
PKNOX1-205ENST00000474336 C9orf163Q8N9P6 203 aa4.87□□□□□ -1.63
PKNOX1-205ENST00000474336 OR13C6PQ8NH95 151 aa4.87□□□□□ -1.63
PKNOX1-205ENST00000474336 FRAS1Q86XX4 4008 aa4.86□□□□□ -1.63
PKNOX1-205ENST00000474336 CHTF8P0CG12 524 aa4.86□□□□□ -1.63
PKNOX1-205ENST00000474336 RPL13AP40429 203 aaKnown RBP4.86□□□□□ -1.63
PKNOX1-205ENST00000474336 C9orf129Q5T035 196 aaKnown RBP4.86□□□□□ -1.63
PKNOX1-205ENST00000474336 NKAPP1Q8N9T2 125 aa4.86□□□□□ -1.63
PKNOX1-205ENST00000474336 DPH3Q96FX2 82 aa4.86□□□□□ -1.63
PKNOX1-205ENST00000474336 A0A0B4J2C4 111 aa4.85□□□□□ -1.63
PKNOX1-205ENST00000474336 FAM168BA1KXE4 195 aa4.85□□□□□ -1.63
PKNOX1-205ENST00000474336 C16orf90A8MZG2 172 aa4.85□□□□□ -1.63
PKNOX1-205ENST00000474336 CFC1BP0CG36 223 aa4.85□□□□□ -1.63
PKNOX1-205ENST00000474336 CFC1P0CG37 223 aa4.85□□□□□ -1.63
PKNOX1-205ENST00000474336 PRR3P79522 188 aaKnown RBP4.85□□□□□ -1.63
PKNOX1-205ENST00000474336 S100A7L2Q5SY68 101 aa4.85□□□□□ -1.63
PKNOX1-205ENST00000474336 LINC00336Q6ZUF6 198 aa4.85□□□□□ -1.63
PKNOX1-205ENST00000474336 PRO1854Q9UHT4 67 aa4.85□□□□□ -1.63
PKNOX1-205ENST00000474336 RYR2Q92736 4967 aa4.84□□□□□ -1.63
PKNOX1-205ENST00000474336 TRAV13-2A0A0B4J235 113 aa4.84□□□□□ -1.63
PKNOX1-205ENST00000474336 NDUFC2O95298 119 aa4.84□□□□□ -1.63
PKNOX1-205ENST00000474336 PSMB2P49721 201 aa4.84□□□□□ -1.63
PKNOX1-205ENST00000474336 SERTAD4-AS1Q5TG53 156 aa4.84□□□□□ -1.63
PKNOX1-205ENST00000474336 Q8NDZ9 215 aa4.84□□□□□ -1.63
PKNOX1-205ENST00000474336 NAA38Q9BRA0 125 aaKnown RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms